| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is atsD [H]
Identifier: 121636584
GI number: 121636584
Start: 787546
End: 789909
Strand: Direct
Name: atsD [H]
Synonym: BCG_0712
Alternate gene names: 121636584
Gene position: 787546-789909 (Clockwise)
Preceding gene: 121636576
Following gene: 121636585
Centisome position: 18.0
GC content: 64.3
Gene sequence:
>2364_bases ATGCCGCAGCCAAGAACGCATCTGCCGATTCCCAGTGCTGCTCGCACCGGGCTGATCACGTATGACGCGAAGGATCCCGA CAGCACCTATCCGCCGATCGAGCAGCTGCGCCCACCGGCGGGTGCCCCGAATGTGTTGCTGATCCTGCTTGACGATGTCG GGTTCGGTGCGTCGAGCGCGTTCGGAGGCCCATGCAGGACGTCGACGGCGGAACTGCTTGCCGGTAACGGGTTGCGGTAC AACCGGTTTCACACCACCGCGCTGTGCTCGCCGACGCGTCAGGCGTTGTTAACTGGACGCAACCATCACTCCGCCGGCAT GGGCGGTATCACCGAAATCGCCACCGGTGCACCGGGATACAGCTCAGTACTACCGAACACCATGTCGCCGATCGCGCGGA CGCTAAAGCTCAACGGCTACAACACCGCCCAGTTCGGCAAGTGCCACGAAGTCCCGGTCTGGCAGACCAGCCCGGTCGGG CCGTTCGACGCGTGGCCCAGCGGCGGCGGTGGTTTCGAATACTTCTACGGGTTTATCGGTGGCGAGGCTAACCAGTGGTA TCCGAGTCTGTACGAGGGCACCACGCCGGTCGAGGTGAACCGCACGCCCGAGGAGGGTTACCATTTCATGGCGGACATGA CCGACAAGGCCCTCGGCTGGATCGGACAGCAGAAGGCACTGGCCCCCGACCGGCCGTTCTTCGTGTACTTCGCCCCGGGC GCCACCCACGCGCCCCACCACGTTCCGCGGGAGTGGGCCGACAAGTACCGGGGCCGCTTCGATGTGGGCTGGGACGCACT GCGAGAGGAAACCTTCGCCCGGCAAAAGGAACTCGGGGTGATCCCGGCGGACTGCCAGCTGACCGCGCGGCACGCCGAAA TCCCGGCGTGGGACGACATGCCGGAGGACCTCAAACCCGTGCTATGCCGGCAGATGGAGGTCTACGCGGGCTTTCTGGAA TACACCGACCACCACGTCGGCCGGCTCGTCGACGGCCTGCAGCGCCTCGGTGTGCTCGACGACACGCTGGTGTTCTACAT CATCGGCGACAACGGCGCCTCGGCCGAGGGCACGATCAACGGCACCTACAACGAGATGTTGAACTTCAACGGCCTGGCCG ACATCGAGACGCCGCGGTTCATGACCGACCGGCTCGACAAGTTCGGCGGGCCGGAGTCCTACAACCACTATTCGGTGGGT TGGGCGCATGCGATGGATACCCCCTATCAGTGGACCAAACAAGTGGCCTCGCACTGGGGTGGCACGCGTAACGGCACGAT TGTGCACTGGCCCAACGGAATTGCCGCCAAGGGGGAGATGCGCTGGCAGTTTCACCACGTCATCGACGTGGCGCCGACCA TCCTGGAGGCGGCGGGGTTGCCGGAACCGTTATTCGTCAACGGCGTGCAGCAACACCCCATCGAAGGGGTCAGCATGGCC TATTCGTTCGACGACGCGCAGGCGCCGGATCGGCACGAGACGCAGTATTTCGAGATGTTCGGAAACCGGGGCATCTACCA CAAGGGTTGGACCGCGGTGACCAAGCACAAGACGCCGTGGATTTTGGTTGGCGAGCAGACCGTCGCGTTCGACGACGACG TGTGGGAGCTCTACGACACCACCAAGGATTGGAGCCAGGCCAAAGACTTGGCCAAGGAGATGCCGGAAAAGCTGCATGAG CTGCAGCGGCTGTGGCTGATCGAGGCGACGCGCTACAACGTGCTTCCGCTGGACGACGACACCGCCAGCCGCATCAACCC CGATCTGGCGGGCAGGCCGGTGCTCATCAGGGGCAACACCCAGGTGCTGTTTTCGAACATGGGCCGGTTGTCGGAGAACT GTGTGCTCAACCTCAAGAACAAATCGCACACGGTGACCGCTGAGGTCGAGGTGCCCGAGACCGGTGCTGAGGGCGTGATC GTCGCGCAGGGCGCCAGCATCGGCGGCTGGAGCCTGTATGCCAACGACGGCAAGCTCAAGTACTGCTACAACCTGGGTGG TATCAAGCACTTCTACGCCGAGTCCGCCGACCCGCTGCCGGCCGGCGCCCATCAGGTGCGCATGGAATTCGCTTATGCCG GTGGCGGTTTGGGCAAGGGCGGCGAGGTAACTCTTTATGTCGACGGCCAACAGGTCGGCGAAGGACATGTCGAAGCCACC CTTGCCATCGTCTTCTCGGCCGACGACGGCTGCGATGTCGGCATGGATTCGGGCTCGCCCGTCTCACCCGACTATGCCCC GGGGAGTAACGCGTTCAACGGGCGGATCAAGGGCGTGCAGCTCGCGATCGCCGAGGCCGCCGCTGCTGCGGGCCATCTGG TCGACCCGGAGCACGCGATCCGCATCGCGCTGGCGCGCCAATAG
Upstream 100 bases:
>100_bases TGAAATTTGGGCGGCGGCTGCCATTGCGGTCGCGTTGACCCGCGGACGGCCCAGACGCTGCGGTTGTAGCGTCGATAGGC ACGCGTATTAGGGAGGAACA
Downstream 100 bases:
>100_bases GGCCGCACAGTCAAACGGGGAGGGGACGGCGATGGAAAAGTCACGGTGCCACGCTGTCGCACATGGAGGTGGGTGTGCGG GATCTGCGAAATCGCACAAG
Product: putative arylsulfatase atsD
Products: NA
Alternate protein names: AS; Aryl-sulfate sulphohydrolase [H]
Number of amino acids: Translated: 787; Mature: 786
Protein sequence:
>787_residues MPQPRTHLPIPSAARTGLITYDAKDPDSTYPPIEQLRPPAGAPNVLLILLDDVGFGASSAFGGPCRTSTAELLAGNGLRY NRFHTTALCSPTRQALLTGRNHHSAGMGGITEIATGAPGYSSVLPNTMSPIARTLKLNGYNTAQFGKCHEVPVWQTSPVG PFDAWPSGGGGFEYFYGFIGGEANQWYPSLYEGTTPVEVNRTPEEGYHFMADMTDKALGWIGQQKALAPDRPFFVYFAPG ATHAPHHVPREWADKYRGRFDVGWDALREETFARQKELGVIPADCQLTARHAEIPAWDDMPEDLKPVLCRQMEVYAGFLE YTDHHVGRLVDGLQRLGVLDDTLVFYIIGDNGASAEGTINGTYNEMLNFNGLADIETPRFMTDRLDKFGGPESYNHYSVG WAHAMDTPYQWTKQVASHWGGTRNGTIVHWPNGIAAKGEMRWQFHHVIDVAPTILEAAGLPEPLFVNGVQQHPIEGVSMA YSFDDAQAPDRHETQYFEMFGNRGIYHKGWTAVTKHKTPWILVGEQTVAFDDDVWELYDTTKDWSQAKDLAKEMPEKLHE LQRLWLIEATRYNVLPLDDDTASRINPDLAGRPVLIRGNTQVLFSNMGRLSENCVLNLKNKSHTVTAEVEVPETGAEGVI VAQGASIGGWSLYANDGKLKYCYNLGGIKHFYAESADPLPAGAHQVRMEFAYAGGGLGKGGEVTLYVDGQQVGEGHVEAT LAIVFSADDGCDVGMDSGSPVSPDYAPGSNAFNGRIKGVQLAIAEAAAAAGHLVDPEHAIRIALARQ
Sequences:
>Translated_787_residues MPQPRTHLPIPSAARTGLITYDAKDPDSTYPPIEQLRPPAGAPNVLLILLDDVGFGASSAFGGPCRTSTAELLAGNGLRY NRFHTTALCSPTRQALLTGRNHHSAGMGGITEIATGAPGYSSVLPNTMSPIARTLKLNGYNTAQFGKCHEVPVWQTSPVG PFDAWPSGGGGFEYFYGFIGGEANQWYPSLYEGTTPVEVNRTPEEGYHFMADMTDKALGWIGQQKALAPDRPFFVYFAPG ATHAPHHVPREWADKYRGRFDVGWDALREETFARQKELGVIPADCQLTARHAEIPAWDDMPEDLKPVLCRQMEVYAGFLE YTDHHVGRLVDGLQRLGVLDDTLVFYIIGDNGASAEGTINGTYNEMLNFNGLADIETPRFMTDRLDKFGGPESYNHYSVG WAHAMDTPYQWTKQVASHWGGTRNGTIVHWPNGIAAKGEMRWQFHHVIDVAPTILEAAGLPEPLFVNGVQQHPIEGVSMA YSFDDAQAPDRHETQYFEMFGNRGIYHKGWTAVTKHKTPWILVGEQTVAFDDDVWELYDTTKDWSQAKDLAKEMPEKLHE LQRLWLIEATRYNVLPLDDDTASRINPDLAGRPVLIRGNTQVLFSNMGRLSENCVLNLKNKSHTVTAEVEVPETGAEGVI VAQGASIGGWSLYANDGKLKYCYNLGGIKHFYAESADPLPAGAHQVRMEFAYAGGGLGKGGEVTLYVDGQQVGEGHVEAT LAIVFSADDGCDVGMDSGSPVSPDYAPGSNAFNGRIKGVQLAIAEAAAAAGHLVDPEHAIRIALARQ >Mature_786_residues PQPRTHLPIPSAARTGLITYDAKDPDSTYPPIEQLRPPAGAPNVLLILLDDVGFGASSAFGGPCRTSTAELLAGNGLRYN RFHTTALCSPTRQALLTGRNHHSAGMGGITEIATGAPGYSSVLPNTMSPIARTLKLNGYNTAQFGKCHEVPVWQTSPVGP FDAWPSGGGGFEYFYGFIGGEANQWYPSLYEGTTPVEVNRTPEEGYHFMADMTDKALGWIGQQKALAPDRPFFVYFAPGA THAPHHVPREWADKYRGRFDVGWDALREETFARQKELGVIPADCQLTARHAEIPAWDDMPEDLKPVLCRQMEVYAGFLEY TDHHVGRLVDGLQRLGVLDDTLVFYIIGDNGASAEGTINGTYNEMLNFNGLADIETPRFMTDRLDKFGGPESYNHYSVGW AHAMDTPYQWTKQVASHWGGTRNGTIVHWPNGIAAKGEMRWQFHHVIDVAPTILEAAGLPEPLFVNGVQQHPIEGVSMAY SFDDAQAPDRHETQYFEMFGNRGIYHKGWTAVTKHKTPWILVGEQTVAFDDDVWELYDTTKDWSQAKDLAKEMPEKLHEL QRLWLIEATRYNVLPLDDDTASRINPDLAGRPVLIRGNTQVLFSNMGRLSENCVLNLKNKSHTVTAEVEVPETGAEGVIV AQGASIGGWSLYANDGKLKYCYNLGGIKHFYAESADPLPAGAHQVRMEFAYAGGGLGKGGEVTLYVDGQQVGEGHVEATL AIVFSADDGCDVGMDSGSPVSPDYAPGSNAFNGRIKGVQLAIAEAAAAAGHLVDPEHAIRIALARQ
Specific function: Unknown
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfatase family [H]
Homologues:
Organism=Homo sapiens, GI38569407, Length=228, Percent_Identity=25.4385964912281, Blast_Score=68, Evalue=4e-11, Organism=Homo sapiens, GI38569405, Length=228, Percent_Identity=25.4385964912281, Blast_Score=67, Evalue=7e-11, Organism=Escherichia coli, GI87081924, Length=362, Percent_Identity=23.4806629834254, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 86070; Mature: 85939
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS00523 SULFATASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQPRTHLPIPSAARTGLITYDAKDPDSTYPPIEQLRPPAGAPNVLLILLDDVGFGASSA CCCCCCCCCCCCHHCCCEEEECCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCC FGGPCRTSTAELLAGNGLRYNRFHTTALCSPTRQALLTGRNHHSAGMGGITEIATGAPGY CCCCCCCCHHHHHCCCCEEECEEEEEEECCHHHHHHHCCCCCCCCCCCCHHHHHCCCCCH SSVLPNTMSPIARTLKLNGYNTAQFGKCHEVPVWQTSPVGPFDAWPSGGGGFEYFYGFIG HHHCCCHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEEC GEANQWYPSLYEGTTPVEVNRTPEEGYHFMADMTDKALGWIGQQKALAPDRPFFVYFAPG CCCCCCCCHHHCCCCCEEECCCCHHCCEEEHHHHHHHHHHCCCCCCCCCCCCEEEEECCC ATHAPHHVPREWADKYRGRFDVGWDALREETFARQKELGVIPADCQLTARHAEIPAWDDM CCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEECCCCEEEEECCCCCCCCCC PEDLKPVLCRQMEVYAGFLEYTDHHVGRLVDGLQRLGVLDDTLVFYIIGDNGASAEGTIN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEC GTYNEMLNFNGLADIETPRFMTDRLDKFGGPESYNHYSVGWAHAMDTPYQWTKQVASHWG CCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHCC GTRNGTIVHWPNGIAAKGEMRWQFHHVIDVAPTILEAAGLPEPLFVNGVQQHPIEGVSMA CCCCCEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCEECCHHHCCCCCEEEE YSFDDAQAPDRHETQYFEMFGNRGIYHKGWTAVTKHKTPWILVGEQTVAFDDDVWELYDT EECCCCCCCCCHHHHHHHHHCCCCCEECCCEEEECCCCCEEEECCEEEECCCCHHHHHHC TKDWSQAKDLAKEMPEKLHELQRLWLIEATRYNVLPLDDDTASRINPDLAGRPVLIRGNT CCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCCHHHCCCCCCCCEEEEECCC QVLFSNMGRLSENCVLNLKNKSHTVTAEVEVPETGAEGVIVAQGASIGGWSLYANDGKLK EEEEHHHCCCCCCEEEEECCCCEEEEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCEE YCYNLGGIKHFYAESADPLPAGAHQVRMEFAYAGGGLGKGGEVTLYVDGQQVGEGHVEAT EEEECCCCHHHHHCCCCCCCCCCHHEEEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEE LAIVFSADDGCDVGMDSGSPVSPDYAPGSNAFNGRIKGVQLAIAEAAAAAGHLVDPEHAI EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECEEEEEEHHHHHHCCCCCCCCCEE RIALARQ EEEEECC >Mature Secondary Structure PQPRTHLPIPSAARTGLITYDAKDPDSTYPPIEQLRPPAGAPNVLLILLDDVGFGASSA CCCCCCCCCCCHHCCCEEEECCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCCCCCCCC FGGPCRTSTAELLAGNGLRYNRFHTTALCSPTRQALLTGRNHHSAGMGGITEIATGAPGY CCCCCCCCHHHHHCCCCEEECEEEEEEECCHHHHHHHCCCCCCCCCCCCHHHHHCCCCCH SSVLPNTMSPIARTLKLNGYNTAQFGKCHEVPVWQTSPVGPFDAWPSGGGGFEYFYGFIG HHHCCCHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEEC GEANQWYPSLYEGTTPVEVNRTPEEGYHFMADMTDKALGWIGQQKALAPDRPFFVYFAPG CCCCCCCCHHHCCCCCEEECCCCHHCCEEEHHHHHHHHHHCCCCCCCCCCCCEEEEECCC ATHAPHHVPREWADKYRGRFDVGWDALREETFARQKELGVIPADCQLTARHAEIPAWDDM CCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEECCCCEEEEECCCCCCCCCC PEDLKPVLCRQMEVYAGFLEYTDHHVGRLVDGLQRLGVLDDTLVFYIIGDNGASAEGTIN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEC GTYNEMLNFNGLADIETPRFMTDRLDKFGGPESYNHYSVGWAHAMDTPYQWTKQVASHWG CCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHCC GTRNGTIVHWPNGIAAKGEMRWQFHHVIDVAPTILEAAGLPEPLFVNGVQQHPIEGVSMA CCCCCEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCEECCHHHCCCCCEEEE YSFDDAQAPDRHETQYFEMFGNRGIYHKGWTAVTKHKTPWILVGEQTVAFDDDVWELYDT EECCCCCCCCCHHHHHHHHHCCCCCEECCCEEEECCCCCEEEECCEEEECCCCHHHHHHC TKDWSQAKDLAKEMPEKLHELQRLWLIEATRYNVLPLDDDTASRINPDLAGRPVLIRGNT CCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCCHHHCCCCCCCCEEEEECCC QVLFSNMGRLSENCVLNLKNKSHTVTAEVEVPETGAEGVIVAQGASIGGWSLYANDGKLK EEEEHHHCCCCCCEEEEECCCCEEEEEEEECCCCCCCEEEEECCCCCCCEEEEECCCCEE YCYNLGGIKHFYAESADPLPAGAHQVRMEFAYAGGGLGKGGEVTLYVDGQQVGEGHVEAT EEEECCCCHHHHHCCCCCCCCCCHHEEEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEE LAIVFSADDGCDVGMDSGSPVSPDYAPGSNAFNGRIKGVQLAIAEAAAAAGHLVDPEHAI EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECEEEEEEHHHHHHCCCCCCCCCEE RIALARQ EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7744061; 10984043 [H]