| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is galE3 [C]
Identifier: 121636454
GI number: 121636454
Start: 658140
End: 659180
Strand: Direct
Name: galE3 [C]
Synonym: BCG_0580
Alternate gene names: 121636454
Gene position: 658140-659180 (Clockwise)
Preceding gene: 121636453
Following gene: 121636456
Centisome position: 15.04
GC content: 70.32
Gene sequence:
>1041_bases ATGAGGGTGCTGCTGACCGGCGCGGCCGGCTTCATCGGGTCGCGCGTGGATGCGGCGTTACGGGCTGCGGGTCACGACGT GGTGGGCGTCGACGCGCTGCTGCCCGCCGCGCACGGGCCAAACCCGGTGCTGCCACCGGGCTGCCAGCGGGTCGACGTGC GCGACGCCAGCGCGCTGGCCCCGTTGTTGGCCGGTGTCGATCTGGTGTGTCACCAGGCCGCCATGGTGGGTGCCGGCGTC AACGCCGCCGACGCACCCGCCTATGGCGGCCACAACGATTTCGCCACCACGGTGCTGCTGGCGCAGATGTTCGCCGCCGG GGTCCGCCGTTTGGTGCTGGCGTCGTCGATGGTGGTTTACGGGCAGGGGCGCTATGACTGTCCCCAGCATGGACCGGTCG ACCCGCTGCCGCGGCGGCGAGCCGACCTGGACAATGGGGTCTTCGAGCACCGTTGCCCGGGGTGCGGCGAGCCAGTCATC TGGCAATTGGTCGACGAGGATGCCCCGTTGCGCCCGCGCAGCCTGTACGCGGCCAGCAAGACCGCGCAGGAGCACTACGC GCTGGCGTGGTCGGAAGCGAGTGGCGGTTCGGTGGTGGCGTTGCGCTACCACAACGTCTACGGCCCCGGCATGCCGCGCG ACACCCCCTACTCCGGAGTGGCCGCGATCTTCCGCTCGGCGGTTGAAAAAGGCAAGCCACCAAAGGTTTTCGAAGACGGC GGCCAGATGCGGGACTTCGTGCACGTGGACGACGTGGCCGCGGCGAACCTCGCCGCGGTGCATCTGGGTGAAGCGGACCG CGACGGGTTTACCGCGGTCAACGTCTGTTCCGGGCGCCCCATCTCGATCCTTCAGGTGGCAACCGCGATATGCGACGCCC GCGGTGGCTCGATGTCCCCGGCCATCACCGGGCACTACCGCAGCGGCGACGTGCGCCACATTGTCGCCGATCCCGCGCGG GCCGCCCGCGTGCTCGGGTTCCGCGCGGCCGTCGATCCAGGCGAAGGACTGCGTGAGTTCGCGTTCGCGCCGCTTCGCTG A
Upstream 100 bases:
>100_bases TCAAAAGGCTGGTGCGGGCCGCCATCGATCGGGTCGCCGACGAGCGCACGTGCACGCACTGTCAACACCACGCCGGTGTT CCGTTGCCGTTCGAGCTGCC
Downstream 100 bases:
>100_bases CCGCTCGAGCTACGACGAGTGGTCCGGCGGCCGGTAGATCTTCGGCCGCACTGGGTGCGTCGACCCAGCTGACCTGAAAA TCCGGGGGGATCCAGCAGGC
Product: putative udp-glucose 4-epimerase galE3
Products: NA
Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MRVLLTGAAGFIGSRVDAALRAAGHDVVGVDALLPAAHGPNPVLPPGCQRVDVRDASALAPLLAGVDLVCHQAAMVGAGV NAADAPAYGGHNDFATTVLLAQMFAAGVRRLVLASSMVVYGQGRYDCPQHGPVDPLPRRRADLDNGVFEHRCPGCGEPVI WQLVDEDAPLRPRSLYAASKTAQEHYALAWSEASGGSVVALRYHNVYGPGMPRDTPYSGVAAIFRSAVEKGKPPKVFEDG GQMRDFVHVDDVAAANLAAVHLGEADRDGFTAVNVCSGRPISILQVATAICDARGGSMSPAITGHYRSGDVRHIVADPAR AARVLGFRAAVDPGEGLREFAFAPLR
Sequences:
>Translated_346_residues MRVLLTGAAGFIGSRVDAALRAAGHDVVGVDALLPAAHGPNPVLPPGCQRVDVRDASALAPLLAGVDLVCHQAAMVGAGV NAADAPAYGGHNDFATTVLLAQMFAAGVRRLVLASSMVVYGQGRYDCPQHGPVDPLPRRRADLDNGVFEHRCPGCGEPVI WQLVDEDAPLRPRSLYAASKTAQEHYALAWSEASGGSVVALRYHNVYGPGMPRDTPYSGVAAIFRSAVEKGKPPKVFEDG GQMRDFVHVDDVAAANLAAVHLGEADRDGFTAVNVCSGRPISILQVATAICDARGGSMSPAITGHYRSGDVRHIVADPAR AARVLGFRAAVDPGEGLREFAFAPLR >Mature_346_residues MRVLLTGAAGFIGSRVDAALRAAGHDVVGVDALLPAAHGPNPVLPPGCQRVDVRDASALAPLLAGVDLVCHQAAMVGAGV NAADAPAYGGHNDFATTVLLAQMFAAGVRRLVLASSMVVYGQGRYDCPQHGPVDPLPRRRADLDNGVFEHRCPGCGEPVI WQLVDEDAPLRPRSLYAASKTAQEHYALAWSEASGGSVVALRYHNVYGPGMPRDTPYSGVAAIFRSAVEKGKPPKVFEDG GQMRDFVHVDDVAAANLAAVHLGEADRDGFTAVNVCSGRPISILQVATAICDARGGSMSPAITGHYRSGDVRHIVADPAR AARVLGFRAAVDPGEGLREFAFAPLR
Specific function: Galactose metabolism; third step. [C]
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sugar epimerase family [H]
Homologues:
Organism=Homo sapiens, GI56237023, Length=359, Percent_Identity=28.9693593314763, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI56118217, Length=359, Percent_Identity=28.9693593314763, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI189083684, Length=359, Percent_Identity=28.9693593314763, Blast_Score=83, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001509 - InterPro: IPR016040 [H]
Pfam domain/function: PF01370 Epimerase [H]
EC number: =5.1.3.2 [H]
Molecular weight: Translated: 36219; Mature: 36219
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLLTGAAGFIGSRVDAALRAAGHDVVGVDALLPAAHGPNPVLPPGCQRVDVRDASALA CEEEEECCCHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCCCCCCCCCEECCCCHHHHH PLLAGVDLVCHQAAMVGAGVNAADAPAYGGHNDFATTVLLAQMFAAGVRRLVLASSMVVY HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEE GQGRYDCPQHGPVDPLPRRRADLDNGVFEHRCPGCGEPVIWQLVDEDAPLRPRSLYAASK ECCCCCCCCCCCCCCCCCHHCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHH TAQEHYALAWSEASGGSVVALRYHNVYGPGMPRDTPYSGVAAIFRSAVEKGKPPKVFEDG HHHHHEEEEEECCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCC GQMRDFVHVDDVAAANLAAVHLGEADRDGFTAVNVCSGRPISILQVATAICDARGGSMSP CCHHHEEECCHHHHHCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCC AITGHYRSGDVRHIVADPARAARVLGFRAAVDPGEGLREFAFAPLR CEEECCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHCCCCC >Mature Secondary Structure MRVLLTGAAGFIGSRVDAALRAAGHDVVGVDALLPAAHGPNPVLPPGCQRVDVRDASALA CEEEEECCCHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCCCCCCCCCEECCCCHHHHH PLLAGVDLVCHQAAMVGAGVNAADAPAYGGHNDFATTVLLAQMFAAGVRRLVLASSMVVY HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEE GQGRYDCPQHGPVDPLPRRRADLDNGVFEHRCPGCGEPVIWQLVDEDAPLRPRSLYAASK ECCCCCCCCCCCCCCCCCHHCCCCCCCHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHH TAQEHYALAWSEASGGSVVALRYHNVYGPGMPRDTPYSGVAAIFRSAVEKGKPPKVFEDG HHHHHEEEEEECCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHCC GQMRDFVHVDDVAAANLAAVHLGEADRDGFTAVNVCSGRPISILQVATAICDARGGSMSP CCHHHEEECCHHHHHCEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCC AITGHYRSGDVRHIVADPARAARVLGFRAAVDPGEGLREFAFAPLR CEEECCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]