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The map label for this gene is mmpS2 [H]

Identifier: 121636424

GI number: 121636424

Start: 627557

End: 628000

Strand: Direct

Name: mmpS2 [H]

Synonym: BCG_0549

Alternate gene names: 121636424

Gene position: 627557-628000 (Clockwise)

Preceding gene: 121636420

Following gene: 121636425

Centisome position: 14.35

GC content: 61.26

Gene sequence:

>444_bases
GTGAGGATGATTTCGGTTAGCGGCGCCGTGAAACGCATGTGGTTGCTGCTGGCCATCGTCGTGGTGGCCGTTGTCGGGGG
GCTTGGTATCTATCGGCTGCACAGCATCTTCGGTGTTCACGAGCAACCCACTGTCATGGTCAAGCCTGATTTCGACGTCC
CGCTGTTCAACCCCAAGCGGGTGACCTACGAAGTCTTTGGCCCCGCCAAGACCGCAAAGATCGCCTACCTGGACCCTGAT
GCCCGGGTGCATCGACTCGATAGCGTGTCCCTGCCGTGGTCCGTCACGGTCGAGACGACGCTGCCCGCGGTCAGCGTCAA
CCTCATGGCGCAGAGTAACGCCGACGTGATCAGCTGCCGGATCATCGTCAACGGCGCCGTTAAGGACGAAAGGTCTGAGA
CCTCGCCGCGAGCGCTAACCTCCTGCCAGGTGTCATCCGGATGA

Upstream 100 bases:

>100_bases
AACGCAACGAGACATCCGATTACTACGCACGTTAGGACATTTCAGGAGGTATCGGGAGGCCTAAGGGTCACTAGGTCCGC
GCGATGGGCGGAACACGAGG

Downstream 100 bases:

>100_bases
GCGAAAGACACGCCGCACTGACGTCACTGCCGCCCATTCTGCCGCGGCTGATCCGCCGGTTTGCGGTGGTGATCGTCCTG
CTCTGGCTGGGCTTCACCGC

Product: putative membrane protein mmpS2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MRMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRVTYEVFGPAKTAKIAYLDPD
ARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCRIIVNGAVKDERSETSPRALTSCQVSSG

Sequences:

>Translated_147_residues
MRMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRVTYEVFGPAKTAKIAYLDPD
ARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCRIIVNGAVKDERSETSPRALTSCQVSSG
>Mature_147_residues
MRMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKRVTYEVFGPAKTAKIAYLDPD
ARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCRIIVNGAVKDERSETSPRALTSCQVSSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008693 [H]

Pfam domain/function: PF05423 Mycobact_memb [H]

EC number: NA

Molecular weight: Translated: 15964; Mature: 15964

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKR
CEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCE
VTYEVFGPAKTAKIAYLDPDARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCR
EEEEEECCCCEEEEEEECCCCCEEECCCCCCCEEEEEECCCCEEEEEEEECCCCCEEEEE
IIVNGAVKDERSETSPRALTSCQVSSG
EEEECCCCCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MRMISVSGAVKRMWLLLAIVVVAVVGGLGIYRLHSIFGVHEQPTVMVKPDFDVPLFNPKR
CEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCE
VTYEVFGPAKTAKIAYLDPDARVHRLDSVSLPWSVTVETTLPAVSVNLMAQSNADVISCR
EEEEEECCCCEEEEEEECCCCCEEECCCCCCCEEEEEECCCCEEEEEEEECCCCCEEEEE
IIVNGAVKDERSETSPRALTSCQVSSG
EEEECCCCCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]