| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121636269
Identifier: 121636269
GI number: 121636269
Start: 465643
End: 466287
Strand: Reverse
Name: 121636269
Synonym: BCG_0394c
Alternate gene names: NA
Gene position: 466287-465643 (Counterclockwise)
Preceding gene: 121636270
Following gene: 121636268
Centisome position: 10.66
GC content: 67.13
Gene sequence:
>645_bases GTGACAGATGCGTCAGTGCACCCCGACGAACTCGATCCCGAGTATCACCACCACGGTGGATTTCCGGAGTACGGTCCGGC CAGTCCCGGTGCGGGGTTCGGCCAGTTCGTGGCGACCATGCGCCGGTTGCAGGACCTGGCGGTCGCGGCGGACCCCGGCG ACGCCGTGTGGGACGAGGCGGCCGAGCGCGCCGCCGCGCTCGTCGAGTTGCTGAGCCCATTTGAGGCCGACGAAGGCAAG GCGCCGGCCGGGCGGACCCCCGGCCTGCCCGGCATGGGCAGCCTGCTGCTACCGCCATGGACGGTGACCCGGTACGGCAC CGACGGTGTTGAGATGCGGGGGTCGTTTAGCCGGTTTCACGTCGGGGGCAACTCCGCGGTGCACGGCGGCGTGTTGCCGC TGTTGTTTGATCACATGTTCGGCATGATCTCGCATGCGGCGGGACGGCCGATCAGCCGGACCGCCTTTCTGCACGTTGAT TACCGCCGAATCACCCCGATTGATGTGCCGTTGATCGTACGCGGACGAGTCACCAATACCGAGGGCCGAAAGGCGTTTGT GTGCGCGGAACTGTTTGACAGCGACGAGACGCTGTTGGCCGAAGGCAACGGCCTGATGGTGCGGCTACTGCCCGGCCAGC CCTAG
Upstream 100 bases:
>100_bases TGCGACTGGAACAGCTTGCCGGAGCACCGGTTTCGTGCATTGGAGTCGGTCCGGGGCGGGAACAGACCATCGTGCGCCGG GACGTCCTGCAGGATCGCCC
Downstream 100 bases:
>100_bases CTGAGATTTTCTGTCTCGACACTCCAAAGCCAAACCTGCGTCAGGCGTCTGTTGAATAATCGTCACTGTCAAGACACCCA AGCGCGGAACGGGACGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase Family Protein; Thioesterase Superfamily; Thioesterase
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTDASVHPDELDPEYHHHGGFPEYGPASPGAGFGQFVATMRRLQDLAVAADPGDAVWDEAAERAAALVELLSPFEADEGK APAGRTPGLPGMGSLLLPPWTVTRYGTDGVEMRGSFSRFHVGGNSAVHGGVLPLLFDHMFGMISHAAGRPISRTAFLHVD YRRITPIDVPLIVRGRVTNTEGRKAFVCAELFDSDETLLAEGNGLMVRLLPGQP
Sequences:
>Translated_214_residues MTDASVHPDELDPEYHHHGGFPEYGPASPGAGFGQFVATMRRLQDLAVAADPGDAVWDEAAERAAALVELLSPFEADEGK APAGRTPGLPGMGSLLLPPWTVTRYGTDGVEMRGSFSRFHVGGNSAVHGGVLPLLFDHMFGMISHAAGRPISRTAFLHVD YRRITPIDVPLIVRGRVTNTEGRKAFVCAELFDSDETLLAEGNGLMVRLLPGQP >Mature_213_residues TDASVHPDELDPEYHHHGGFPEYGPASPGAGFGQFVATMRRLQDLAVAADPGDAVWDEAAERAAALVELLSPFEADEGKA PAGRTPGLPGMGSLLLPPWTVTRYGTDGVEMRGSFSRFHVGGNSAVHGGVLPLLFDHMFGMISHAAGRPISRTAFLHVDY RRITPIDVPLIVRGRVTNTEGRKAFVCAELFDSDETLLAEGNGLMVRLLPGQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22911; Mature: 22780
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDASVHPDELDPEYHHHGGFPEYGPASPGAGFGQFVATMRRLQDLAVAADPGDAVWDEA CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHH AERAAALVELLSPFEADEGKAPAGRTPGLPGMGSLLLPPWTVTRYGTDGVEMRGSFSRFH HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCEEEE VGGNSAVHGGVLPLLFDHMFGMISHAAGRPISRTAFLHVDYRRITPIDVPLIVRGRVTNT ECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEECCCCCCCEEEECEEECC EGRKAFVCAELFDSDETLLAEGNGLMVRLLPGQP CCCEEEEEHHHHCCCCEEEECCCCEEEEECCCCC >Mature Secondary Structure TDASVHPDELDPEYHHHGGFPEYGPASPGAGFGQFVATMRRLQDLAVAADPGDAVWDEA CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCHHHHHHH AERAAALVELLSPFEADEGKAPAGRTPGLPGMGSLLLPPWTVTRYGTDGVEMRGSFSRFH HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEECCCCEEEE VGGNSAVHGGVLPLLFDHMFGMISHAAGRPISRTAFLHVDYRRITPIDVPLIVRGRVTNT ECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEECCCCCCCEEEECEEECC EGRKAFVCAELFDSDETLLAEGNGLMVRLLPGQP CCCEEEEEHHHHCCCCEEEECCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA