| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is PE6
Identifier: 121636249
GI number: 121636249
Start: 430462
End: 430977
Strand: Reverse
Name: PE6
Synonym: BCG_0374c
Alternate gene names: NA
Gene position: 430977-430462 (Counterclockwise)
Preceding gene: 121636251
Following gene: 121636244
Centisome position: 9.85
GC content: 69.77
Gene sequence:
>516_bases GTGCGGTCCATGGGGTTCTTGCACCGCGCATGCCGGGCGCCGTCGAGCTTGCCGGCTCCGCTCATGGCCCGGCCAGGGCG CAGCGTTCTTGCCCGGCCGGCCGCGACCCCACCGGGCCCACTGTGCGCCACCACCCGGCCCAGGCCACCACAAGGAAACC AGCCGCCAGCATCTCGGATCAGCAACTTCCCGCCGAAGCGCCACAAGACCCGCGTGCTGGCGGCGGCCGAAGACGAGGTG TCGGCGGCCGTCGCGGCACTGATTTCCGCACACGGTCGGCGGCATCACTCCCTCAACAATCAGGCGGCGGCGTTCCATGG CCAGTTTGCACAGAACCTGAACGTGGGTGCGGGCTCGTGTGCCAGCGCCGAGACCACCGCCGATGCGCCGCCCCAGGCGC TGTTGGGGCCCGCTGATCGCCAACGGCGCCAACGGCGGGCTGTTCGGCAATGGCTGGTCCGGTGGGCTGCTCATCCAGGA CGGGCTACCAGGGGGTTCCATAATCACCGACAATAA
Upstream 100 bases:
>100_bases CGCTACCCGACCGGCGCCCGGTAACCCAAGGCGCTGTGGATAACGTGGATGACTAGGGAGACACCGGCTCGGTAGCCGCC GAGGGCGAGCACGGCACTCG
Downstream 100 bases:
>100_bases CCCGCCGAAATCAGTTGCGCTCCAACAACTCCAGCAGGTAGTTACCATATCCGGACTTGACCAGAGCACGGGCTCGCTGC ACCAGCTGCTCGTCGTCGAT
Product: PE family protein
Products: NA
Alternate protein names: PE Family Protein
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MRSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRISNFPPKRHKTRVLAAAEDEV SAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPPQALLGPADRQRRQRRAVRQWLVRWAAHPG RATRGFHNHRQ
Sequences:
>Translated_171_residues MRSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRISNFPPKRHKTRVLAAAEDEV SAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPPQALLGPADRQRRQRRAVRQWLVRWAAHPG RATRGFHNHRQ >Mature_171_residues MRSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRISNFPPKRHKTRVLAAAEDEV SAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSCASAETTADAPPQALLGPADRQRRQRRAVRQWLVRWAAHPG RATRGFHNHRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18416; Mature: 18416
Theoretical pI: Translated: 12.62; Mature: 12.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRI CCCHHHHHHHHCCCCCCCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH SNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSC CCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC ASAETTADAPPQALLGPADRQRRQRRAVRQWLVRWAAHPGRATRGFHNHRQ CCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCC >Mature Secondary Structure MRSMGFLHRACRAPSSLPAPLMARPGRSVLARPAATPPGPLCATTRPRPPQGNQPPASRI CCCHHHHHHHHCCCCCCCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH SNFPPKRHKTRVLAAAEDEVSAAVAALISAHGRRHHSLNNQAAAFHGQFAQNLNVGAGSC CCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC ASAETTADAPPQALLGPADRQRRQRRAVRQWLVRWAAHPGRATRGFHNHRQ CCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA