| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121636162
Identifier: 121636162
GI number: 121636162
Start: 328865
End: 329686
Strand: Reverse
Name: 121636162
Synonym: BCG_0287c
Alternate gene names: NA
Gene position: 329686-328865 (Counterclockwise)
Preceding gene: 121636163
Following gene: 121636161
Centisome position: 7.54
GC content: 58.39
Gene sequence:
>822_bases ATGAGCGCACCCACGGCGAACCGTCCTGCGATCGGCGTTTTCACACCCACCCGCGCACAAATCCCAGAACGGACGCTTCG CACCGACCTCTGGTGGTTGCCACCGCTGCTGACCAACCTCGGTCTTTTGGCGTTCATCTGCTATGCGACCACTCGGGCGT TCTGGGGCAGCCAATACTGGGTGGAAAAATATCATTACCTGACGCCGTTCTACTCGCCGTGCGTCAGCGCGTCCTGCCAG CCCGGCGCCAGTCATCTCGGCGTCTGGTTCGGGCATTTTCCAGGGTGGATTCCGTTGGGAGCGATGGTATTACCGTTCCT GCTTGGATTCCGGCTCACCTGCTATTATTACCGCAAGGCCTACTACCGGTCGGTATGGCAGTCGCCGACAAGCTGCGCAG TGCCCGAGCCGCGGGCTCATTACACCGGTGAAACCCGGCTTCCGCTGATCGTCCAGAACACCCACCGGTATTTCTTCTAT ATCGCGGTGGTGGTGTCGCTGATCAACACCTATGACGCGATCGCGGCATTTCACTCGCCGTCCGGATTCGGCTTCGGTTT GGGCAATGTCATTTTGACGATCAATGTGGTTCTGCTGTGGGCATACACCATCTCGTGCCATTCGTGCCGGCACGCCACCG GCGGTCGGCTCAAGCATTTCTCCAAGCACCCAGTGCGATACTGGATCTGGACACAGGTCAGCAAGCTCAATACCCGACAC ATGCAATTCGCGTGGATCACGCTGGGGACCCTGGCGCTCACCGATTTCTACATCATGCTGGTGGCCAGTGGCAGCATCAC AGATCTCAGATTTATTGGCTGA
Upstream 100 bases:
>100_bases GTCGGAGGTCACAGGTACTGAACAACCGAGCCCCCCAGAAAAAGGGGGCCGTTCTCTGTGTACCCTTCAACGAGATAACA CGCGAAGAGGATCACATTAG
Downstream 100 bases:
>100_bases AGGATCGTTTCAGAAGCTGAGCGAGGTTTTATGGTTGAGGTCGAGCGGCACTCCTACGACGTAGTCGTGATCGGTGCCGG CGGCGCGGGGTTACGCGCGG
Product: putative succinate dehydrogenase membrane anchor subunit
Products: NA
Alternate protein names: Succinate Dehydrogenase; Succinate Dehydrogenase Membrane Anchor Subunit
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSAPTANRPAIGVFTPTRAQIPERTLRTDLWWLPPLLTNLGLLAFICYATTRAFWGSQYWVEKYHYLTPFYSPCVSASCQ PGASHLGVWFGHFPGWIPLGAMVLPFLLGFRLTCYYYRKAYYRSVWQSPTSCAVPEPRAHYTGETRLPLIVQNTHRYFFY IAVVVSLINTYDAIAAFHSPSGFGFGLGNVILTINVVLLWAYTISCHSCRHATGGRLKHFSKHPVRYWIWTQVSKLNTRH MQFAWITLGTLALTDFYIMLVASGSITDLRFIG
Sequences:
>Translated_273_residues MSAPTANRPAIGVFTPTRAQIPERTLRTDLWWLPPLLTNLGLLAFICYATTRAFWGSQYWVEKYHYLTPFYSPCVSASCQ PGASHLGVWFGHFPGWIPLGAMVLPFLLGFRLTCYYYRKAYYRSVWQSPTSCAVPEPRAHYTGETRLPLIVQNTHRYFFY IAVVVSLINTYDAIAAFHSPSGFGFGLGNVILTINVVLLWAYTISCHSCRHATGGRLKHFSKHPVRYWIWTQVSKLNTRH MQFAWITLGTLALTDFYIMLVASGSITDLRFIG >Mature_272_residues SAPTANRPAIGVFTPTRAQIPERTLRTDLWWLPPLLTNLGLLAFICYATTRAFWGSQYWVEKYHYLTPFYSPCVSASCQP GASHLGVWFGHFPGWIPLGAMVLPFLLGFRLTCYYYRKAYYRSVWQSPTSCAVPEPRAHYTGETRLPLIVQNTHRYFFYI AVVVSLINTYDAIAAFHSPSGFGFGLGNVILTINVVLLWAYTISCHSCRHATGGRLKHFSKHPVRYWIWTQVSKLNTRHM QFAWITLGTLALTDFYIMLVASGSITDLRFIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31077; Mature: 30946
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPTANRPAIGVFTPTRAQIPERTLRTDLWWLPPLLTNLGLLAFICYATTRAFWGSQYW CCCCCCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VEKYHYLTPFYSPCVSASCQPGASHLGVWFGHFPGWIPLGAMVLPFLLGFRLTCYYYRKA HHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YYRSVWQSPTSCAVPEPRAHYTGETRLPLIVQNTHRYFFYIAVVVSLINTYDAIAAFHSP HHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC SGFGFGLGNVILTINVVLLWAYTISCHSCRHATGGRLKHFSKHPVRYWIWTQVSKLNTRH CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEEHHHHHCCCCC MQFAWITLGTLALTDFYIMLVASGSITDLRFIG EEEEEHHHHHHHHHHHHHHHEECCCCCEEEECC >Mature Secondary Structure SAPTANRPAIGVFTPTRAQIPERTLRTDLWWLPPLLTNLGLLAFICYATTRAFWGSQYW CCCCCCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VEKYHYLTPFYSPCVSASCQPGASHLGVWFGHFPGWIPLGAMVLPFLLGFRLTCYYYRKA HHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YYRSVWQSPTSCAVPEPRAHYTGETRLPLIVQNTHRYFFYIAVVVSLINTYDAIAAFHSP HHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCC SGFGFGLGNVILTINVVLLWAYTISCHSCRHATGGRLKHFSKHPVRYWIWTQVSKLNTRH CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEEHHHHHCCCCC MQFAWITLGTLALTDFYIMLVASGSITDLRFIG EEEEEHHHHHHHHHHHHHHHEECCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA