| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121635967
Identifier: 121635967
GI number: 121635967
Start: 89555
End: 90076
Strand: Direct
Name: 121635967
Synonym: BCG_0088
Alternate gene names: NA
Gene position: 89555-90076 (Clockwise)
Preceding gene: 121635966
Following gene: 121635968
Centisome position: 2.05
GC content: 60.73
Gene sequence:
>522_bases ATGCCGGTGGTGACCGCGGTCGGCCGCCGCCGGGGTTTCGCCATGCCCTGGGTGTCCACCGCACGGTCCGGTGCGGTGAT GCTGGCGAACTATTCGGCCGGCGTTTGCGGGCGGGTGTCTTCACCGGGCCTTAACGTCAGGAAAATGTGTCTGAAAGCCA ACACGCCCGGCGCGGTAACCTGGCTCGACACGCCGAAGAGATTCTTGTCCACACAAACGGCGTCGCGTTGTATGGCCGTT AACAGCAGTGATGTCGTAACGGGCCGTATTGATCCACAGGTTCTCCACACCCCGCTCAACACAGACGTCGACGGATATGC ACATGCGATGCACAGCTCCATAAACAGTGGCCCCTTGGAGTACTTGCCAGCAACGTTTAGCGTCTTCCCGGCGCTAGGCG ATGTGGGTGACTTGGGCGGTGGTGTCGGTGCGGCGACTTACGCTCTGGATAGGTTGTCGAATATGCGTTCGGGTGCTTGT GTCGGAGGAGGTGAGAGCCCATGGCGGTCGTTGATGACCTAG
Upstream 100 bases:
>100_bases CATTTTGTGTCGGTGCACCTGCACCCGGAAATCGATGTCGAGGTATCGCTGGACGTCGTGGCGCAGAGCTAAGGCGAGCT GAGGCCACAACAGTTTGCGC
Downstream 100 bases:
>100_bases CGCCCGGCATGGACTCCTCACCGCCCAGTGAAGATTACGGCCGTCAACCACCGCAGGATCTCGCCGCCGAGCAGTCCGTG CTGGGCGGGATGTTGCTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVTWLDTPKRFLSTQTASRCMAV NSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLEYLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGAC VGGGESPWRSLMT
Sequences:
>Translated_173_residues MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVTWLDTPKRFLSTQTASRCMAV NSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLEYLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGAC VGGGESPWRSLMT >Mature_172_residues PVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVTWLDTPKRFLSTQTASRCMAVN SSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLEYLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACV GGGESPWRSLMT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y057_MYCTU (P64679)
Other databases:
- EMBL: BX842572 - EMBL: AE000516 - PIR: A70914 - RefSeq: NP_214571.1 - RefSeq: NP_334471.1 - EnsemblBacteria: EBMYCT00000001519 - EnsemblBacteria: EBMYCT00000072593 - GeneID: 887008 - GeneID: 922728 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0063 - KEGG: mtu:Rv0057 - TIGR: MT0063 - TubercuList: Rv0057 - GeneTree: EBGT00050000018274 - HOGENOM: HBG128112 - OMA: MRMPVVT - ProtClustDB: CLSK790226
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18063; Mature: 17932
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT CCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHEEECCCCCEEE WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE ECCCHHHHHHHHHHHHEEECCCCCEEEECCCHHEEECCCCCCCHHHHHHHHHCCCCCCHH YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT HCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCHHHHHCC >Mature Secondary Structure PVVTAVGRRRGFAMPWVSTARSGAVMLANYSAGVCGRVSSPGLNVRKMCLKANTPGAVT CCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHEEECCCCCEEE WLDTPKRFLSTQTASRCMAVNSSDVVTGRIDPQVLHTPLNTDVDGYAHAMHSSINSGPLE ECCCHHHHHHHHHHHHEEECCCCCEEEECCCHHEEECCCCCCCHHHHHHHHHCCCCCCHH YLPATFSVFPALGDVGDLGGGVGAATYALDRLSNMRSGACVGGGESPWRSLMT HCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036