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The map label for this gene is mtc28

Identifier: 121635950

GI number: 121635950

Start: 72083

End: 73015

Strand: Reverse

Name: mtc28

Synonym: BCG_0071c

Alternate gene names: 121635950

Gene position: 73015-72083 (Counterclockwise)

Preceding gene: 121635952

Following gene: 121635949

Centisome position: 1.67

GC content: 67.52

Gene sequence:

>933_bases
ATGATCCAGATCGCGCGCACCTGGCGGGTCTTCGCAGGCGGCATGGCCACCGGTTTCATCGGCGTGGTGCTGGTCACCGC
CGGGAAGGCCTCAGCGGATCCCCTGCTGCCACCGCCGCCTATCCCTGCCCCAGTCTCGGCGCCGGCAACAGTCCCGCCCG
TGCAGAACCTCACGGCGCTTCCGGGCGGGAGCAGCAACAGGTTCTCACCGGCGCCAGCACCCGCACCGATCGCGTCGCCG
ATTCCGGTCGGAGCACCCGGGTCCACCGCTGTGCCCCCGCTGCCGCCGCCAGTGACTCCCGCGATCAGCGGCACACTTCG
GGACCACCTCCGGGAGAAGGGCGTCAAGCTGGAGGCACAGCGACCGCACGGATTCAAGGCGCTCGACATCACACTGCCGA
TGCCGCCGCGCTGGACTCAGGTGCCCGACCCCAACGTGCCCGACGCGTTCGTGGTGATCGCCGACCGGTTGGGCAACAGC
GTCTACACGTCGAATGCGCAGCTGGTGGTGTATAGGCTGATCGGTGACTTCGATCCCGCTGAGGCCATCACACACGGCTA
CATTGACAGCCAGAAATTGCTCGCATGGCAGACCACAAACGCCTCGATGGCCAATTTCGACGGCTTTCCGTCATCAATCA
TCGAGGGCACCTACCGCGAAAACGACATGACCCTCAACACCTCCCGGCGCCACGTCATCGCCACCTCCGGAGCCGACAAG
TACCTGGTTTCGCTGTCGGTGACCACCGCGCTGTCGCAGGCGGTCACCGACGGGCCGGCCACCGATGCGATTGTCAACGG
ATTCCAAGTGGTTGCGCATGCGGCGCCCGCTCAGGCGCCTGCCCCGGCACCCGGTTCGGCACCGGTGGGACTACCCGGGC
AGGCGCCTGGGTATCCGCCCGCGGGCACCCTGACACCAGTCCCGCCGCGCTAG

Upstream 100 bases:

>100_bases
TCCAGCTGCATTTCAAGCCTGTGCACTGCCATGGAGCGCTGGTTACATTCAGCCTCGACGACGGGCACCGTCGCCCGGCC
ATTCGGAGGGACCGACGCAA

Downstream 100 bases:

>100_bases
GTCGCGATGAGGCCGAGCAGAAACACGGGCCCGCATGGAGCTCGGTGAGCGGATTCGTCGGCGGCCTCGTATGGTGAACG
AATGTTCCTCGCGGGTGTGC

Product: secreted proline rich protein MTC28 (proline rich 28 kDa antigen)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MIQIARTWRVFAGGMATGFIGVVLVTAGKASADPLLPPPPIPAPVSAPATVPPVQNLTALPGGSSNRFSPAPAPAPIASP
IPVGAPGSTAVPPLPPPVTPAISGTLRDHLREKGVKLEAQRPHGFKALDITLPMPPRWTQVPDPNVPDAFVVIADRLGNS
VYTSNAQLVVYRLIGDFDPAEAITHGYIDSQKLLAWQTTNASMANFDGFPSSIIEGTYRENDMTLNTSRRHVIATSGADK
YLVSLSVTTALSQAVTDGPATDAIVNGFQVVAHAAPAQAPAPAPGSAPVGLPGQAPGYPPAGTLTPVPPR

Sequences:

>Translated_310_residues
MIQIARTWRVFAGGMATGFIGVVLVTAGKASADPLLPPPPIPAPVSAPATVPPVQNLTALPGGSSNRFSPAPAPAPIASP
IPVGAPGSTAVPPLPPPVTPAISGTLRDHLREKGVKLEAQRPHGFKALDITLPMPPRWTQVPDPNVPDAFVVIADRLGNS
VYTSNAQLVVYRLIGDFDPAEAITHGYIDSQKLLAWQTTNASMANFDGFPSSIIEGTYRENDMTLNTSRRHVIATSGADK
YLVSLSVTTALSQAVTDGPATDAIVNGFQVVAHAAPAQAPAPAPGSAPVGLPGQAPGYPPAGTLTPVPPR
>Mature_310_residues
MIQIARTWRVFAGGMATGFIGVVLVTAGKASADPLLPPPPIPAPVSAPATVPPVQNLTALPGGSSNRFSPAPAPAPIASP
IPVGAPGSTAVPPLPPPVTPAISGTLRDHLREKGVKLEAQRPHGFKALDITLPMPPRWTQVPDPNVPDAFVVIADRLGNS
VYTSNAQLVVYRLIGDFDPAEAITHGYIDSQKLLAWQTTNASMANFDGFPSSIIEGTYRENDMTLNTSRRHVIATSGADK
YLVSLSVTTALSQAVTDGPATDAIVNGFQVVAHAAPAQAPAPAPGSAPVGLPGQAPGYPPAGTLTPVPPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.leprae ML0031

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PR28_MYCBO (P0A5Q7)

Other databases:

- EMBL:   BX248334
- RefSeq:   NP_853710.1
- EnsemblBacteria:   EBMYCT00000014362
- GeneID:   1090742
- GenomeReviews:   BX248333_GR
- KEGG:   mbo:Mb0041c
- GeneTree:   EBGT00050000014985
- HOGENOM:   HBG569806
- OMA:   NAQVVVY
- ProtClustDB:   CLSK799339
- BioCyc:   MBOV233413:MB0041C-MONOMER
- InterPro:   IPR019674

Pfam domain/function: PF10738 Lpp-LpqN

EC number: NA

Molecular weight: Translated: 31924; Mature: 31924

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQIARTWRVFAGGMATGFIGVVLVTAGKASADPLLPPPPIPAPVSAPATVPPVQNLTAL
CEEEECCHHHHHCCHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
PGGSSNRFSPAPAPAPIASPIPVGAPGSTAVPPLPPPVTPAISGTLRDHLREKGVKLEAQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEC
RPHGFKALDITLPMPPRWTQVPDPNVPDAFVVIADRLGNSVYTSNAQLVVYRLIGDFDPA
CCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEHHHCCEEEECCCCEEEEEECCCCCHH
EAITHGYIDSQKLLAWQTTNASMANFDGFPSSIIEGTYRENDMTLNTSRRHVIATSGADK
HHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCEEEEECCCCE
YLVSLSVTTALSQAVTDGPATDAIVNGFQVVAHAAPAQAPAPAPGSAPVGLPGQAPGYPP
EEEEEEHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
AGTLTPVPPR
CCCCCCCCCC
>Mature Secondary Structure
MIQIARTWRVFAGGMATGFIGVVLVTAGKASADPLLPPPPIPAPVSAPATVPPVQNLTAL
CEEEECCHHHHHCCHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
PGGSSNRFSPAPAPAPIASPIPVGAPGSTAVPPLPPPVTPAISGTLRDHLREKGVKLEAQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEC
RPHGFKALDITLPMPPRWTQVPDPNVPDAFVVIADRLGNSVYTSNAQLVVYRLIGDFDPA
CCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEHHHCCEEEECCCCEEEEEECCCCCHH
EAITHGYIDSQKLLAWQTTNASMANFDGFPSSIIEGTYRENDMTLNTSRRHVIATSGADK
HHHHHCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCEEEEECCCCE
YLVSLSVTTALSQAVTDGPATDAIVNGFQVVAHAAPAQAPAPAPGSAPVGLPGQAPGYPP
EEEEEEHHHHHHHHHCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
AGTLTPVPPR
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972