| Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
|---|---|
| Accession | NC_008769 |
| Length | 4,374,522 |
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The map label for this gene is 121635947
Identifier: 121635947
GI number: 121635947
Start: 69527
End: 70852
Strand: Reverse
Name: 121635947
Synonym: BCG_0068c
Alternate gene names: NA
Gene position: 70852-69527 (Counterclockwise)
Preceding gene: 121635949
Following gene: 121635946
Centisome position: 1.62
GC content: 67.72
Gene sequence:
>1326_bases GTGCCCAGGGTGGAAGTGGGTTTAGTGATTCACTCCCGGATGCACGCACGCGCACCCGTCGACGTTTGGCGGTCGGTGCG CAGCTTGCCCGACTTCTGGCGTCTGCTGCAGGTGCGGGTTGCGAGTCAGTTCGGCGACGGGTTGTTTCAGGCGGGGCTGG CCGGAGCGTTGCTGTTCAACCCGGACCGGGCGGCCGACCCGATGGCCATCGCGGGGGCCTTCGCGGTGCTGTTTCTGCCC TATTCGCTGCTGGGGCCCTTCGCCGGGGCCCTAATGGACCGGTGGGATCGGCGGTGGGTGCTGGTTGGCGCCAACACCGG CCGGCTAGCCCTGATCGCCGGGGTCGGCACGATACTCGCGGTCGGAGCCGGCGACGTGCCGCTGTTGGTCGGAGCGCTGG TCGCCAACGGCTTGGCACGATTCGTCGCCTCGGGACTGTCGGCGGCACTGCCCCACGTGGTGCCGCGCGAACAGGTGGTC ACGATGAACTCGGTGGCCATCGCGTCGGGGGCGGTCTCCGCGTTCCTGGGCGCCAACTTCATGCTGTTGCCTCGTTGGCT GCTCGGCAGCGGCGACGAGGGGGCCTCCGCGATCGTCTTCCTGGTGGCGATCCCCGTATCGATCGCGTTGCTTTGGTCGC TGCGGTTCGGCCCGCGGGTACTCGGCCCGGACGACACCGAACGCGCGATCCACGGATCTGCTGTCTACGCCGTGGTCACC GGTTGGCTACATGGAGCGCGCACCGTGGTGCAACTTCCGACCGTCGCTGCCGGCCTGTCCGGTTTGGCAGCGCATCGGAT GGTGGTCGGTATCAACTCACTGCTGATCTTGCTCCTGGTCCGCCACGTGACCGCCCGGGCCGTTGGGGGGTTGGGTACCG CACTGCTGTTCTTCGCGGCCACCGGGCTGGGAGCCTTCCTGGCCAACGTCTTGACTCCGACCGCGATCCGGCGCTGGGGA CGCTACGCCACGGCAAATGGCGCGTTGGCTGCGGCCGCCACTATCCAGGTCGCGGCCGCCGGGCTGCTGGTCCCGGTGAT GGTGGTATGCGGCTTCCTTTTAGGTGTGGCCGGCCAGGTGGTCAAGCTGTGCGCCGATTCGGCGATGCAGATGGACGTCG ACGACGCATTGCGCGGGCACGTGTTCGCCGTGCAGGATGCACTGTTTTGGGTCTCATACATCCTCTCGATTACCGTGGCC GCAGCCTTGATTCCCGAGCACGGGCACGCGCCCGTATTTGTGCTGTTCGGGTCGGCGATCTACCTAGCCGGGCTGGTGGT GCACACCATCGTCGGGCGCCGCGGCCAGCCTGTGATCGGTCGCTAG
Upstream 100 bases:
>100_bases CCATCATCGCACCACCGTCGCATCGCCCGGGGCGAACAAGCAGGGTCGGCGAATATTTGTACTGTGGTTGGGGCGGCACG GGGTGGACCGAACCTTGCCT
Downstream 100 bases:
>100_bases GGTACAAACATGCCTTTCCCGACGAACTGTTACCTCAGGAGGTGGTGATGGCGGATCCTGGGCCGTTCGTGGCAGACCTG CGTGCCGAAAGCGACGACCT
Product: putative integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MPRVEVGLVIHSRMHARAPVDVWRSVRSLPDFWRLLQVRVASQFGDGLFQAGLAGALLFNPDRAADPMAIAGAFAVLFLP YSLLGPFAGALMDRWDRRWVLVGANTGRLALIAGVGTILAVGAGDVPLLVGALVANGLARFVASGLSAALPHVVPREQVV TMNSVAIASGAVSAFLGANFMLLPRWLLGSGDEGASAIVFLVAIPVSIALLWSLRFGPRVLGPDDTERAIHGSAVYAVVT GWLHGARTVVQLPTVAAGLSGLAAHRMVVGINSLLILLLVRHVTARAVGGLGTALLFFAATGLGAFLANVLTPTAIRRWG RYATANGALAAAATIQVAAAGLLVPVMVVCGFLLGVAGQVVKLCADSAMQMDVDDALRGHVFAVQDALFWVSYILSITVA AALIPEHGHAPVFVLFGSAIYLAGLVVHTIVGRRGQPVIGR
Sequences:
>Translated_441_residues MPRVEVGLVIHSRMHARAPVDVWRSVRSLPDFWRLLQVRVASQFGDGLFQAGLAGALLFNPDRAADPMAIAGAFAVLFLP YSLLGPFAGALMDRWDRRWVLVGANTGRLALIAGVGTILAVGAGDVPLLVGALVANGLARFVASGLSAALPHVVPREQVV TMNSVAIASGAVSAFLGANFMLLPRWLLGSGDEGASAIVFLVAIPVSIALLWSLRFGPRVLGPDDTERAIHGSAVYAVVT GWLHGARTVVQLPTVAAGLSGLAAHRMVVGINSLLILLLVRHVTARAVGGLGTALLFFAATGLGAFLANVLTPTAIRRWG RYATANGALAAAATIQVAAAGLLVPVMVVCGFLLGVAGQVVKLCADSAMQMDVDDALRGHVFAVQDALFWVSYILSITVA AALIPEHGHAPVFVLFGSAIYLAGLVVHTIVGRRGQPVIGR >Mature_440_residues PRVEVGLVIHSRMHARAPVDVWRSVRSLPDFWRLLQVRVASQFGDGLFQAGLAGALLFNPDRAADPMAIAGAFAVLFLPY SLLGPFAGALMDRWDRRWVLVGANTGRLALIAGVGTILAVGAGDVPLLVGALVANGLARFVASGLSAALPHVVPREQVVT MNSVAIASGAVSAFLGANFMLLPRWLLGSGDEGASAIVFLVAIPVSIALLWSLRFGPRVLGPDDTERAIHGSAVYAVVTG WLHGARTVVQLPTVAAGLSGLAAHRMVVGINSLLILLLVRHVTARAVGGLGTALLFFAATGLGAFLANVLTPTAIRRWGR YATANGALAAAATIQVAAAGLLVPVMVVCGFLLGVAGQVVKLCADSAMQMDVDDALRGHVFAVQDALFWVSYILSITVAA ALIPEHGHAPVFVLFGSAIYLAGLVVHTIVGRRGQPVIGR
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y037_MYCTU (P0A5C1)
Other databases:
- EMBL: BX842572 - EMBL: AE000516 - PIR: C70702 - RefSeq: NP_214551.1 - RefSeq: NP_334451.1 - ProteinModelPortal: P0A5C1 - EnsemblBacteria: EBMYCT00000001856 - EnsemblBacteria: EBMYCT00000070138 - GeneID: 887042 - GeneID: 922611 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0042 - KEGG: mtu:Rv0037c - TIGR: MT0042 - TubercuList: Rv0037c - GeneTree: EBGT00050000014798 - HOGENOM: HBG565047 - OMA: AILFNPE - ProtClustDB: CLSK871747 - InterPro: IPR011701 - InterPro: IPR016196
Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter
EC number: NA
Molecular weight: Translated: 45867; Mature: 45736
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x12e61a28)-; HASH(0x1271b910)-; HASH(0x12dd0ebc)-; HASH(0x12fb81f4)-; HASH(0x12fa19ec)-; HASH(0x12fa5cb0)-; HASH(0x12727ac0)-; HASH(0x1270f7d0)-; HASH(0x129de3fc)-; HASH(0x1271d81c)-; HASH(0x12ed4be4)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRVEVGLVIHSRMHARAPVDVWRSVRSLPDFWRLLQVRVASQFGDGLFQAGLAGALLFN CCCEEEEHEEHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEC PDRAADPMAIAGAFAVLFLPYSLLGPFAGALMDRWDRRWVLVGANTGRLALIAGVGTILA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEHHHHHHE VGAGDVPLLVGALVANGLARFVASGLSAALPHVVPREQVVTMNSVAIASGAVSAFLGANF ECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEHHHHHHHHHHHHHHHCCCH MLLPRWLLGSGDEGASAIVFLVAIPVSIALLWSLRFGPRVLGPDDTERAIHGSAVYAVVT HEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHH GWLHGARTVVQLPTVAAGLSGLAAHRMVVGINSLLILLLVRHVTARAVGGLGTALLFFAA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGLGAFLANVLTPTAIRRWGRYATANGALAAAATIQVAAAGLLVPVMVVCGFLLGVAGQV HHHHHHHHHHHCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKLCADSAMQMDVDDALRGHVFAVQDALFWVSYILSITVAAALIPEHGHAPVFVLFGSAI HHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHH YLAGLVVHTIVGRRGQPVIGR HHHHHHHHHHHCCCCCCCCCH >Mature Secondary Structure PRVEVGLVIHSRMHARAPVDVWRSVRSLPDFWRLLQVRVASQFGDGLFQAGLAGALLFN CCEEEEHEEHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEC PDRAADPMAIAGAFAVLFLPYSLLGPFAGALMDRWDRRWVLVGANTGRLALIAGVGTILA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEHHHHHHE VGAGDVPLLVGALVANGLARFVASGLSAALPHVVPREQVVTMNSVAIASGAVSAFLGANF ECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEHHHHHHHHHHHHHHHCCCH MLLPRWLLGSGDEGASAIVFLVAIPVSIALLWSLRFGPRVLGPDDTERAIHGSAVYAVVT HEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHH GWLHGARTVVQLPTVAAGLSGLAAHRMVVGINSLLILLLVRHVTARAVGGLGTALLFFAA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGLGAFLANVLTPTAIRRWGRYATANGALAAAATIQVAAAGLLVPVMVVCGFLLGVAGQV HHHHHHHHHHHCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKLCADSAMQMDVDDALRGHVFAVQDALFWVSYILSITVAAALIPEHGHAPVFVLFGSAI HHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHH YLAGLVVHTIVGRRGQPVIGR HHHHHHHHHHHCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036