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The map label for this gene is med [H]

Identifier: 121611903

GI number: 121611903

Start: 5555317

End: 5556465

Strand: Direct

Name: med [H]

Synonym: Veis_5006

Alternate gene names: 121611903

Gene position: 5555317-5556465 (Clockwise)

Preceding gene: 121611902

Following gene: 121611904

Centisome position: 99.79

GC content: 65.88

Gene sequence:

>1149_bases
ATGACTGATCTGCGCAAACGCTGCGAACTGGCGGCGCTCTTTGCCGCCGCTGCGGCCGCCCTGACGGGCTGTGGCAAGAA
GGAAGAACCGGCCCCGGCACCGGCCCCTGTGGCACAGGCGCCGGCGCCCAAGCCCGAGCCATTGAAGATCGCCTTTGCCT
ATGTCGGCCCGGTGGGGGACGGGGGCTGGTCGTTTGCGCACGACAACGGCCGCAAGGCCATCGAAAAGGAGTTCGGCGAC
AAGGTGGCCACCAGTTTCGTCGACAGCGTGCCCGAGTCGGCCGACGCCGACCGCGTGCTGCGCGATCTGGTCGGCCAGGG
CAACCAGCTGATATTCGGCACCACCTTCGGCTACATGGAGCCGATGCTCAAGGTGGCGCAAGACAACCCGGGCGTCCGGT
TCGAGCATGCCACGGGCTACAAGACCGCCGAGAACATGCGCACCTATGACAGCCGCACTTACGAAGGCGCGTACATGGCG
GGCATCATCGCCGGCGCGATGACCCGCACGAACCAGCTCGGCGTGGTCGGCTCGGTGCCCATTCCCGAAGTGCTGCGCAA
CATCAACAGCTTCACGCTCGGGGCGCAATCGGTCAACCCCAAGATCAAGACCCGTGTCGTGTGGGTCAACGAATGGTTCA
GCCCCCCGAAGGAAACCGAGGCCGCCACCACGCTGATCAACGGCGGTGCCGATGTGCTGTTCCAGAACACCGACTCGGCC
GCCGTGCTCAAGACCGCGCAGGACAAGGGCAAGCGCGCCTTTGGCTGGGACTCCGACATGACCGCCTACGGCCCCAAGGC
CCACCTGGCATCGGCCGTGATCAACTGGGGCCCCTACTATGTCAAGGCCACCCGGGATGCGCTCGAAGGCACCTGGGCCA
CGGGCCAAAGCTGGTGGGGCGTCAAGGAAGGCGCGATCGACATCGTCTCGATCGCCGATGACGTGCCCGCCGAAACCCGG
GCCAAGGTCGACGCCGTGAAAAAGGGCCTGGCCGACGGCAGCTACCAGATCTGGAAAGGCCCGATCCTGGGCCAGGACGG
CAAGCCCGTGCTGGCAACGGACGCCGTGGCCGACGACAAATTCCTGGGCGGCATCAACTTTTACGTCAAGGGCGTGGAAG
GCAAGATCCCGGGCGGCGACAAGCCGTAG

Upstream 100 bases:

>100_bases
CCGGCGGCCCTCGGCAAGCCGTTCCATCCCGGCTGATAATCCCCCCCCCCCCCGCTTTTGCCGGTGTTTCAACCCCTGAT
GTTCTGAAGAAGGATCCGAT

Downstream 100 bases:

>100_bases
TGTCGCGTCACCGGTCATCTGTCGGTCTGCGCTGGCCATCGAAGCGCATCGCGGCGTTGCATCGCTTGCCAATACAGCTC
GGTATGGGCAAGCGATGCGC

Product: basic membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MTDLRKRCELAALFAAAAAALTGCGKKEEPAPAPAPVAQAPAPKPEPLKIAFAYVGPVGDGGWSFAHDNGRKAIEKEFGD
KVATSFVDSVPESADADRVLRDLVGQGNQLIFGTTFGYMEPMLKVAQDNPGVRFEHATGYKTAENMRTYDSRTYEGAYMA
GIIAGAMTRTNQLGVVGSVPIPEVLRNINSFTLGAQSVNPKIKTRVVWVNEWFSPPKETEAATTLINGGADVLFQNTDSA
AVLKTAQDKGKRAFGWDSDMTAYGPKAHLASAVINWGPYYVKATRDALEGTWATGQSWWGVKEGAIDIVSIADDVPAETR
AKVDAVKKGLADGSYQIWKGPILGQDGKPVLATDAVADDKFLGGINFYVKGVEGKIPGGDKP

Sequences:

>Translated_382_residues
MTDLRKRCELAALFAAAAAALTGCGKKEEPAPAPAPVAQAPAPKPEPLKIAFAYVGPVGDGGWSFAHDNGRKAIEKEFGD
KVATSFVDSVPESADADRVLRDLVGQGNQLIFGTTFGYMEPMLKVAQDNPGVRFEHATGYKTAENMRTYDSRTYEGAYMA
GIIAGAMTRTNQLGVVGSVPIPEVLRNINSFTLGAQSVNPKIKTRVVWVNEWFSPPKETEAATTLINGGADVLFQNTDSA
AVLKTAQDKGKRAFGWDSDMTAYGPKAHLASAVINWGPYYVKATRDALEGTWATGQSWWGVKEGAIDIVSIADDVPAETR
AKVDAVKKGLADGSYQIWKGPILGQDGKPVLATDAVADDKFLGGINFYVKGVEGKIPGGDKP
>Mature_381_residues
TDLRKRCELAALFAAAAAALTGCGKKEEPAPAPAPVAQAPAPKPEPLKIAFAYVGPVGDGGWSFAHDNGRKAIEKEFGDK
VATSFVDSVPESADADRVLRDLVGQGNQLIFGTTFGYMEPMLKVAQDNPGVRFEHATGYKTAENMRTYDSRTYEGAYMAG
IIAGAMTRTNQLGVVGSVPIPEVLRNINSFTLGAQSVNPKIKTRVVWVNEWFSPPKETEAATTLINGGADVLFQNTDSAA
VLKTAQDKGKRAFGWDSDMTAYGPKAHLASAVINWGPYYVKATRDALEGTWATGQSWWGVKEGAIDIVSIADDVPAETRA
KVDAVKKGLADGSYQIWKGPILGQDGKPVLATDAVADDKFLGGINFYVKGVEGKIPGGDKP

Specific function: Positive activator of the comK gene [H]

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 40671; Mature: 40540

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLRKRCELAALFAAAAAALTGCGKKEEPAPAPAPVAQAPAPKPEPLKIAFAYVGPVGD
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC
GGWSFAHDNGRKAIEKEFGDKVATSFVDSVPESADADRVLRDLVGQGNQLIFGTTFGYME
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCHHHHH
PMLKVAQDNPGVRFEHATGYKTAENMRTYDSRTYEGAYMAGIIAGAMTRTNQLGVVGSVP
HHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEECCC
IPEVLRNINSFTLGAQSVNPKIKTRVVWVNEWFSPPKETEAATTLINGGADVLFQNTDSA
HHHHHHCCCCEEECCCCCCCCEEEEEEEEECCCCCCCHHHHHHEEECCCCEEEEECCCCC
AVLKTAQDKGKRAFGWDSDMTAYGPKAHLASAVINWGPYYVKATRDALEGTWATGQSWWG
EEEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCCCC
VKEGAIDIVSIADDVPAETRAKVDAVKKGLADGSYQIWKGPILGQDGKPVLATDAVADDK
CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCEECCCCCCEEEECCCCCCC
FLGGINFYVKGVEGKIPGGDKP
CCCCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
TDLRKRCELAALFAAAAAALTGCGKKEEPAPAPAPVAQAPAPKPEPLKIAFAYVGPVGD
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC
GGWSFAHDNGRKAIEKEFGDKVATSFVDSVPESADADRVLRDLVGQGNQLIFGTTFGYME
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCHHHHH
PMLKVAQDNPGVRFEHATGYKTAENMRTYDSRTYEGAYMAGIIAGAMTRTNQLGVVGSVP
HHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEECCC
IPEVLRNINSFTLGAQSVNPKIKTRVVWVNEWFSPPKETEAATTLINGGADVLFQNTDSA
HHHHHHCCCCEEECCCCCCCCEEEEEEEEECCCCCCCHHHHHHEEECCCCEEEEECCCCC
AVLKTAQDKGKRAFGWDSDMTAYGPKAHLASAVINWGPYYVKATRDALEGTWATGQSWWG
EEEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHCCCCCCCCCCCC
VKEGAIDIVSIADDVPAETRAKVDAVKKGLADGSYQIWKGPILGQDGKPVLATDAVADDK
CCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCEECCCCCCEEEECCCCCCC
FLGGINFYVKGVEGKIPGGDKP
CCCCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9335269; 9384377 [H]