Click here to switch to the map view.

The map label for this gene is yufP [H]

Identifier: 121611901

GI number: 121611901

Start: 5553147

End: 5554220

Strand: Direct

Name: yufP [H]

Synonym: Veis_5004

Alternate gene names: 121611901

Gene position: 5553147-5554220 (Clockwise)

Preceding gene: 121611900

Following gene: 121611902

Centisome position: 99.76

GC content: 70.02

Gene sequence:

>1074_bases
ATGTTTAGGCTGGAGCCGCGCCCCGAAGCCTCCCGGCTCTGGAGCTATGGCTCGCCGCTGCTGGCGCTGGCGCTGACGGT
GCTGATCGGCACGGCCTTGTTCATCGCGCTGGGCAAGGACCCGGTGCGCGGGCTGCAATTGTTCTTCTGGGAGCCGCTCA
AGTCGCGCTATGCGCTCGGCGAGTTGATGGTCAAGGCCACGCCGCTGCTGCTGATCGCGCTCGGGCTGGCCCTGTGCTTT
CGCGCCAACGTCTGGAACATCGGCGCCGAGGGGCAGTACGTGATCGGCGCCGTCGCCGCCGGCGGCGTGGCGCTGCTGGC
CAACCAGCGCACGGGCGCCTGGATCTGGCCGGCCATCTTGCTCGCCGGCGTGCTGGGCGGCATGGCCTGGGCGGCGCTGG
TGGCCCTGTTGCGCGACCGGTTCCATGCGAACGAAATCCTGGTCAGCCTGATGCTGGTCTACGTGGCCGCGCTGGTGCTG
GGCTATCTGGTCTATGGCCCCTGGAAAGACCCGCTGGGCTACAACTTTCCGCAGACCCGGATGTTTGACAAAGGCACGCA
GATACCGCGGCTGATGCCAGGCTCGCGCATGACGATCGGCCTGCTGCTGGCGCTGGCCGGGGCGGCGGCGCTGTGGGTGT
ATTTGTTTCGCACCCGTGCCGGCTTTGCGCTGCAAGTGGGCGGGCTGGCGCCGGCAGCGGCCCGCTACGCCGGCTTTTGC
CCGCGCCGGGCGCTGTGGACGGCGCTGCTGATCTCCGGCGGCGCGGCCGGCCTGGCGGGCGCGCTGGAGGTGGCCGGCCC
GATTGGCCAGCTCACGCCGCATGTGCCGGCGGGCTACGGCTTTGCCGCGATCATCGTGGCCTTCGTCGGGCGCCTGCACC
CGGCGGGCATGATGGTCTCGGCGCTGCTGATGAGCATGTTCTACATCGGCGGCGAGCTGGCGCAATCGCGCCTGGGGCTG
CCCAAATCGCTCACCGGCGTGTTCCAGGGGCTGCTGCTGTTCACGCTGCTGGCCTGCGACACGCTGATCGCATACCGCGT
GCGCCGGGGCGCAGGCGCCAAAGGCGGTGCCTGA

Upstream 100 bases:

>100_bases
GGGCAGGCCACGGTCGAGCGCATCGGCGCATGGATGAGCGGGCTGTGGCAGGCCGATATGCAAACCCCTCCGGCGCCGGC
GCCGGCACGGCAGGTGCCGC

Downstream 100 bases:

>100_bases
AATGGCGCGCCCGCCCCGCGCCTGCGGCCCGGCGACGCCGGCTGCGCTGCCTGCCTGGCCCGGGCTGCGCCGGTTGCCCA
TTGCATGCGTTTCATGCGTT

Product: inner-membrane translocator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MFRLEPRPEASRLWSYGSPLLALALTVLIGTALFIALGKDPVRGLQLFFWEPLKSRYALGELMVKATPLLLIALGLALCF
RANVWNIGAEGQYVIGAVAAGGVALLANQRTGAWIWPAILLAGVLGGMAWAALVALLRDRFHANEILVSLMLVYVAALVL
GYLVYGPWKDPLGYNFPQTRMFDKGTQIPRLMPGSRMTIGLLLALAGAAALWVYLFRTRAGFALQVGGLAPAAARYAGFC
PRRALWTALLISGGAAGLAGALEVAGPIGQLTPHVPAGYGFAAIIVAFVGRLHPAGMMVSALLMSMFYIGGELAQSRLGL
PKSLTGVFQGLLLFTLLACDTLIAYRVRRGAGAKGGA

Sequences:

>Translated_357_residues
MFRLEPRPEASRLWSYGSPLLALALTVLIGTALFIALGKDPVRGLQLFFWEPLKSRYALGELMVKATPLLLIALGLALCF
RANVWNIGAEGQYVIGAVAAGGVALLANQRTGAWIWPAILLAGVLGGMAWAALVALLRDRFHANEILVSLMLVYVAALVL
GYLVYGPWKDPLGYNFPQTRMFDKGTQIPRLMPGSRMTIGLLLALAGAAALWVYLFRTRAGFALQVGGLAPAAARYAGFC
PRRALWTALLISGGAAGLAGALEVAGPIGQLTPHVPAGYGFAAIIVAFVGRLHPAGMMVSALLMSMFYIGGELAQSRLGL
PKSLTGVFQGLLLFTLLACDTLIAYRVRRGAGAKGGA
>Mature_357_residues
MFRLEPRPEASRLWSYGSPLLALALTVLIGTALFIALGKDPVRGLQLFFWEPLKSRYALGELMVKATPLLLIALGLALCF
RANVWNIGAEGQYVIGAVAAGGVALLANQRTGAWIWPAILLAGVLGGMAWAALVALLRDRFHANEILVSLMLVYVAALVL
GYLVYGPWKDPLGYNFPQTRMFDKGTQIPRLMPGSRMTIGLLLALAGAAALWVYLFRTRAGFALQVGGLAPAAARYAGFC
PRRALWTALLISGGAAGLAGALEVAGPIGQLTPHVPAGYGFAAIIVAFVGRLHPAGMMVSALLMSMFYIGGELAQSRLGL
PKSLTGVFQGLLLFTLLACDTLIAYRVRRGAGAKGGA

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 37793; Mature: 37793

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRLEPRPEASRLWSYGSPLLALALTVLIGTALFIALGKDPVRGLQLFFWEPLKSRYALG
CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ELMVKATPLLLIALGLALCFRANVWNIGAEGQYVIGAVAAGGVALLANQRTGAWIWPAIL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHCCEEEEECCCCCCHHHHHHH
LAGVLGGMAWAALVALLRDRFHANEILVSLMLVYVAALVLGYLVYGPWKDPLGYNFPQTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
MFDKGTQIPRLMPGSRMTIGLLLALAGAAALWVYLFRTRAGFALQVGGLAPAAARYAGFC
HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCC
PRRALWTALLISGGAAGLAGALEVAGPIGQLTPHVPAGYGFAAIIVAFVGRLHPAGMMVS
HHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHH
ALLMSMFYIGGELAQSRLGLPKSLTGVFQGLLLFTLLACDTLIAYRVRRGAGAKGGA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MFRLEPRPEASRLWSYGSPLLALALTVLIGTALFIALGKDPVRGLQLFFWEPLKSRYALG
CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ELMVKATPLLLIALGLALCFRANVWNIGAEGQYVIGAVAAGGVALLANQRTGAWIWPAIL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHCCEEEEECCCCCCHHHHHHH
LAGVLGGMAWAALVALLRDRFHANEILVSLMLVYVAALVLGYLVYGPWKDPLGYNFPQTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
MFDKGTQIPRLMPGSRMTIGLLLALAGAAALWVYLFRTRAGFALQVGGLAPAAARYAGFC
HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCC
PRRALWTALLISGGAAGLAGALEVAGPIGQLTPHVPAGYGFAAIIVAFVGRLHPAGMMVS
HHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHH
ALLMSMFYIGGELAQSRLGLPKSLTGVFQGLLLFTLLACDTLIAYRVRRGAGAKGGA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]