Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121611824

Identifier: 121611824

GI number: 121611824

Start: 5445727

End: 5446110

Strand: Direct

Name: 121611824

Synonym: Veis_4925

Alternate gene names: NA

Gene position: 5445727-5446110 (Clockwise)

Preceding gene: 121611823

Following gene: 121611825

Centisome position: 97.83

GC content: 70.31

Gene sequence:

>384_bases
ATGAACCACGCCATCGTCTTGTTGTCCCACGGCTCCCGTGATCCGCTGTGGCGCGCCCCGGTGCAGGCCGTGGCGGCCCG
GATTGCCGCGCAAAAGCCCGGCCGCCAGGTGCGCTGCGCCTATCTGGAACTGTGCGCCCCGTCCCTGGCCGACGCCGCCG
GCCAACTCGTGGCCCGGGGTGCGACACAGGTCACCGTGGTGCCGATGTTCCTCGGTGCCGGCCGGCATGTCCGCGAGGAT
TTGCCGCTGCTCGTGCAGCAACTGCGCGGCGCCCACCCGGGCGTGCAATTTGACGTGCAGGCGGCCATTGGCGCAGACCC
GCGCGTCACCGCATTGATGGCGGACATCGCGTGCGAGGCCCCGCCGGAGTCGAAACCTTTCTGA

Upstream 100 bases:

>100_bases
TGGCTGACCGCTGCGGCGCCGGGACTGATCTATTCGCTGCTCTCGTTGGCGGCCTTTGGCTGGCTGGTGCTCAGGCGCTG
ACCCCTGCCCCACCCAACCC

Downstream 100 bases:

>100_bases
ACTGCCATGAACCTGCACCAATTTCGCTTCGTCCAAGAGGCTGCGCGCCGCAACCTGAACCTGACCGAGGCCGCCAAGGC
CCTGCACACATCGCAGCCGG

Product: cobalamin (vitamin B12) biosynthesis CbiX protein

Products: NA

Alternate protein names: Sirohydrochlorin Cobaltochelatase; Cobalamin Biosynthesis Cbix Protein; Cobalamin Biosynthesis CbiX; Cobaltochelatase; Cobalamin Biosynthesis-Related Protein

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MNHAIVLLSHGSRDPLWRAPVQAVAARIAAQKPGRQVRCAYLELCAPSLADAAGQLVARGATQVTVVPMFLGAGRHVRED
LPLLVQQLRGAHPGVQFDVQAAIGADPRVTALMADIACEAPPESKPF

Sequences:

>Translated_127_residues
MNHAIVLLSHGSRDPLWRAPVQAVAARIAAQKPGRQVRCAYLELCAPSLADAAGQLVARGATQVTVVPMFLGAGRHVRED
LPLLVQQLRGAHPGVQFDVQAAIGADPRVTALMADIACEAPPESKPF
>Mature_127_residues
MNHAIVLLSHGSRDPLWRAPVQAVAARIAAQKPGRQVRCAYLELCAPSLADAAGQLVARGATQVTVVPMFLGAGRHVRED
LPLLVQQLRGAHPGVQFDVQAAIGADPRVTALMADIACEAPPESKPF

Specific function: Unknown

COG id: COG2138

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13434; Mature: 13434

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHAIVLLSHGSRDPLWRAPVQAVAARIAAQKPGRQVRCAYLELCAPSLADAAGQLVARG
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHCC
ATQVTVVPMFLGAGRHVREDLPLLVQQLRGAHPGVQFDVQAAIGADPRVTALMADIACEA
CCEEEEEEHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCC
PPESKPF
CCCCCCC
>Mature Secondary Structure
MNHAIVLLSHGSRDPLWRAPVQAVAARIAAQKPGRQVRCAYLELCAPSLADAAGQLVARG
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHCC
ATQVTVVPMFLGAGRHVREDLPLLVQQLRGAHPGVQFDVQAAIGADPRVTALMADIACEA
CCEEEEEEHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCC
PPESKPF
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA