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The map label for this gene is exbD [C]

Identifier: 121611791

GI number: 121611791

Start: 5410187

End: 5410621

Strand: Direct

Name: exbD [C]

Synonym: Veis_4892

Alternate gene names: 121611791

Gene position: 5410187-5410621 (Clockwise)

Preceding gene: 121611790

Following gene: 121611792

Centisome position: 97.19

GC content: 67.13

Gene sequence:

>435_bases
ATGAACTTCCGCACCCTCTGCCGCGACGAACCCGAGATCAACCTGATCCCGTTCATCGACGTGCTGCTGGTGGTCCTCAT
CTTCCTGATGCTCACCACCACCTACAGCAAGTTCACGCAATTGCAACTGACGCTGCCCGTGGCCGACGCCGAGCAGCAGC
GCGACCGGCCCCGGGAAGTGATCGTTTCCGTGGCTGCCAATGGCCGCTATGCGGTCAACCAGACCGGCGTCGACGGGCGC
AGCCTCGAGGCCATCGTGCAAGCGTTGCGCAGCGCCACCCCGGCCGGCCGCGACAGCGTGCTGATCATCAGCGCCGACGC
CATGGCCTCGCACCAGTCCGTGGTCACGGTGATGGAGGCCGCGCGCCGCTTGGGCCTGGCCCAGATCACGTTTGCCACGC
AGTCCTCGGCCTCGGCACGGGCCAGCGGTCGCTGA

Upstream 100 bases:

>100_bases
GGCGCTACTTTCGCGCCCGCGTCGATGCCTACCTGCTGACGCTGGAACTGGCCGCCGAGCAATTCGTGCACCACATGCTG
CAACTGCGCCAGATAATGCG

Downstream 100 bases:

>100_bases
CCGGCATGGGCGCCTTGCGGCCGCAGCCGCCCCGCATGCCGGCAGGGCATGTTGCGCCAGCGTACTGGCAAAAACGCGGC
CTGGCCGCCTGGGCGCTGTG

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: Biopolymer Transport ExbD-Related Transmembrane Protein; Biopolymer Transport; Biopolymer Transporter; Biopolymer Transport Protein ExbD; Iopolymer Transport ExbD2 Protein; Biopolymer ExbD/lR Family Transporter; Biopolymer Transport Protein Exbd/lr

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MNFRTLCRDEPEINLIPFIDVLLVVLIFLMLTTTYSKFTQLQLTLPVADAEQQRDRPREVIVSVAANGRYAVNQTGVDGR
SLEAIVQALRSATPAGRDSVLIISADAMASHQSVVTVMEAARRLGLAQITFATQSSASARASGR

Sequences:

>Translated_144_residues
MNFRTLCRDEPEINLIPFIDVLLVVLIFLMLTTTYSKFTQLQLTLPVADAEQQRDRPREVIVSVAANGRYAVNQTGVDGR
SLEAIVQALRSATPAGRDSVLIISADAMASHQSVVTVMEAARRLGLAQITFATQSSASARASGR
>Mature_144_residues
MNFRTLCRDEPEINLIPFIDVLLVVLIFLMLTTTYSKFTQLQLTLPVADAEQQRDRPREVIVSVAANGRYAVNQTGVDGR
SLEAIVQALRSATPAGRDSVLIISADAMASHQSVVTVMEAARRLGLAQITFATQSSASARASGR

Specific function: Involved In The Tonb-Dependent Energy-Dependent Transport Of Various Receptor-Bound Substrates. [C]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Type II Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15633; Mature: 15633

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFRTLCRDEPEINLIPFIDVLLVVLIFLMLTTTYSKFTQLQLTLPVADAEQQRDRPREV
CCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHCCHHHH
IVSVAANGRYAVNQTGVDGRSLEAIVQALRSATPAGRDSVLIISADAMASHQSVVTVMEA
EEECCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHH
ARRLGLAQITFATQSSASARASGR
HHHCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MNFRTLCRDEPEINLIPFIDVLLVVLIFLMLTTTYSKFTQLQLTLPVADAEQQRDRPREV
CCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHCCHHHH
IVSVAANGRYAVNQTGVDGRSLEAIVQALRSATPAGRDSVLIISADAMASHQSVVTVMEA
EEECCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHH
ARRLGLAQITFATQSSASARASGR
HHHCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA