| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611787
Identifier: 121611787
GI number: 121611787
Start: 5406006
End: 5406500
Strand: Direct
Name: 121611787
Synonym: Veis_4888
Alternate gene names: NA
Gene position: 5406006-5406500 (Clockwise)
Preceding gene: 121611786
Following gene: 121611790
Centisome position: 97.11
GC content: 67.88
Gene sequence:
>495_bases ATGACCGCTTTGCACCCCGCATCCCTGCGTCGCACCCGGCGCGCGCGCCGGGTATGCCGCGCCAGCATGGGCCTGGCACT GCTCGCGGCGCTGCTGGCCACCGCCCAGGAGGGGGCGCAACTGACGCTGCCACGGGTCGAACTGACGGCCGGCATGTACC GTATCGAGGCCCAGGTAGCCCAGGCGCCACAGGAGCGCCAGACCGGGCTGATGCACCGCCAGGAAATGCCGCAGCACGAA GGCATGCTGTTCGTGTTCGAGCAGCCGGCACAGCAGTGCTTCTGGATGAAGGACACCTTGCTGCCACTGACGGCCGCATT CGTTGCCGATGACGGCACCATCGTGAACCTCGCGGACATGCGGCCCCGGACGCTGGACTCGCACTGCTCGGCCAAGCCCG TGCGCTATGTGCTGGAGATGAACCAGGGCTGGTTTGCCAAAAAGGGGATCAGGGCCGGGGCCAGGCTCGGTGGCGCACCG TTTGCGCACAGGTGA
Upstream 100 bases:
>100_bases CAAGGCAGGCAAGACCGCCAAAAAGAAAACCCACAAGAAGATGGCCAAGAAAAAGGCGGCCCACAAGGTCGGCTGAAAGG CCGGGGATCGATCTGCGTCG
Downstream 100 bases:
>100_bases TCGGGCGCCGCGCCCAGAGCATCGGGTCGGAACCATGCGCGACGGCGGGCGCAGGCGGCGGCTCGAAGTCCCGCCATGCG TGCAGAAAGCCCAGTGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTALHPASLRRTRRARRVCRASMGLALLAALLATAQEGAQLTLPRVELTAGMYRIEAQVAQAPQERQTGLMHRQEMPQHE GMLFVFEQPAQQCFWMKDTLLPLTAAFVADDGTIVNLADMRPRTLDSHCSAKPVRYVLEMNQGWFAKKGIRAGARLGGAP FAHR
Sequences:
>Translated_164_residues MTALHPASLRRTRRARRVCRASMGLALLAALLATAQEGAQLTLPRVELTAGMYRIEAQVAQAPQERQTGLMHRQEMPQHE GMLFVFEQPAQQCFWMKDTLLPLTAAFVADDGTIVNLADMRPRTLDSHCSAKPVRYVLEMNQGWFAKKGIRAGARLGGAP FAHR >Mature_163_residues TALHPASLRRTRRARRVCRASMGLALLAALLATAQEGAQLTLPRVELTAGMYRIEAQVAQAPQERQTGLMHRQEMPQHEG MLFVFEQPAQQCFWMKDTLLPLTAAFVADDGTIVNLADMRPRTLDSHCSAKPVRYVLEMNQGWFAKKGIRAGARLGGAPF AHR
Specific function: Unknown
COG id: COG1430
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18239; Mature: 18107
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALHPASLRRTRRARRVCRASMGLALLAALLATAQEGAQLTLPRVELTAGMYRIEAQVA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHH QAPQERQTGLMHRQEMPQHEGMLFVFEQPAQQCFWMKDTLLPLTAAFVADDGTIVNLADM HCCHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHEECCCCEEEECCC RPRTLDSHCSAKPVRYVLEMNQGWFAKKGIRAGARLGGAPFAHR CCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TALHPASLRRTRRARRVCRASMGLALLAALLATAQEGAQLTLPRVELTAGMYRIEAQVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHH QAPQERQTGLMHRQEMPQHEGMLFVFEQPAQQCFWMKDTLLPLTAAFVADDGTIVNLADM HCCHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHEECCCCEEEECCC RPRTLDSHCSAKPVRYVLEMNQGWFAKKGIRAGARLGGAPFAHR CCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA