Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

Click here to switch to the map view.

The map label for this gene is 121611712

Identifier: 121611712

GI number: 121611712

Start: 5309349

End: 5309912

Strand: Direct

Name: 121611712

Synonym: Veis_4809

Alternate gene names: NA

Gene position: 5309349-5309912 (Clockwise)

Preceding gene: 121611711

Following gene: 121611716

Centisome position: 95.38

GC content: 59.57

Gene sequence:

>564_bases
ATGCAGACGCCACTTTGTAAAGACCTGGATACGCCGTTGCGTAAGGATCTGAACATGCCATTGTGCAGCGGCTTGGAAAC
GCCGCTGCACCCCCAGACGCCGCTGCGCGTCCACCCGGAGACACCGTTGCGTGTCCATTCGGAAACACCGCTGCGTGCTC
ACCAGGAAACGCCACTGCGTGGCGTGCGCACCAACATCGTGCAGTCGATTCGCGCCTTCCGCGTGCAGGACTTGCAAGAT
GCCGCCACTGTCATGGGCCAGCATTTCCTGTACGCCAACCTGGCCCATGCGCAGTCCAAGCAGGATGTGCTCGACCTGAT
TGCCGGGCAATTCATCTTCCCGGCGCATTTCGGCAAGAACTTTGATGCGCTGTACGACTGCATGACCGAGCCATTGCATC
AATCGGGCCAGCAGCCCGGTTTCATCGTGGTGCTCGAGCAGATTCCGGCCACCGGCAAGTTCGACAAGGAGGCGCGCGAG
CAGTTGCTCGATGTCTTTCGCGACGCTGCCGACTACTGGGGCGACCGAAAGATCCCGTTCCGGTGTTTCTATTCTTTTCT
GTAG

Upstream 100 bases:

>100_bases
CGGTGGCGCGCCCCACGAGCAAATCACCCATTCGCACAGGCGGCATCCCGCCGCCTTGCGAATGGCCGCAAGTTCTTGAT
AAAGAAAGAGTAGCGCACAG

Downstream 100 bases:

>100_bases
CCCGTTCTGCATCCACCAGCCAAGCAGAACGGGCGAACGAGGCGAACGGCACCCCGGCGGTCGCGGGCACGGCAGTCGAT
GCCGACCCCACCGAGAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Barstar Family Protein; Ribonuclease Inhibitor; Ribonuclease Inhibitor Barstar

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MQTPLCKDLDTPLRKDLNMPLCSGLETPLHPQTPLRVHPETPLRVHSETPLRAHQETPLRGVRTNIVQSIRAFRVQDLQD
AATVMGQHFLYANLAHAQSKQDVLDLIAGQFIFPAHFGKNFDALYDCMTEPLHQSGQQPGFIVVLEQIPATGKFDKEARE
QLLDVFRDAADYWGDRKIPFRCFYSFL

Sequences:

>Translated_187_residues
MQTPLCKDLDTPLRKDLNMPLCSGLETPLHPQTPLRVHPETPLRVHSETPLRAHQETPLRGVRTNIVQSIRAFRVQDLQD
AATVMGQHFLYANLAHAQSKQDVLDLIAGQFIFPAHFGKNFDALYDCMTEPLHQSGQQPGFIVVLEQIPATGKFDKEARE
QLLDVFRDAADYWGDRKIPFRCFYSFL
>Mature_187_residues
MQTPLCKDLDTPLRKDLNMPLCSGLETPLHPQTPLRVHPETPLRVHSETPLRAHQETPLRGVRTNIVQSIRAFRVQDLQD
AATVMGQHFLYANLAHAQSKQDVLDLIAGQFIFPAHFGKNFDALYDCMTEPLHQSGQQPGFIVVLEQIPATGKFDKEARE
QLLDVFRDAADYWGDRKIPFRCFYSFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21325; Mature: 21325

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTPLCKDLDTPLRKDLNMPLCSGLETPLHPQTPLRVHPETPLRVHSETPLRAHQETPLR
CCCCCCCCCCCHHHHHCCCCHHCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCHH
GVRTNIVQSIRAFRVQDLQDAATVMGQHFLYANLAHAQSKQDVLDLIAGQFIFPAHFGKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCCC
FDALYDCMTEPLHQSGQQPGFIVVLEQIPATGKFDKEAREQLLDVFRDAADYWGDRKIPF
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHH
RCFYSFL
HHHHHCC
>Mature Secondary Structure
MQTPLCKDLDTPLRKDLNMPLCSGLETPLHPQTPLRVHPETPLRVHSETPLRAHQETPLR
CCCCCCCCCCCHHHHHCCCCHHCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCHH
GVRTNIVQSIRAFRVQDLQDAATVMGQHFLYANLAHAQSKQDVLDLIAGQFIFPAHFGKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCCC
FDALYDCMTEPLHQSGQQPGFIVVLEQIPATGKFDKEAREQLLDVFRDAADYWGDRKIPF
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHH
RCFYSFL
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA