| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611712
Identifier: 121611712
GI number: 121611712
Start: 5309349
End: 5309912
Strand: Direct
Name: 121611712
Synonym: Veis_4809
Alternate gene names: NA
Gene position: 5309349-5309912 (Clockwise)
Preceding gene: 121611711
Following gene: 121611716
Centisome position: 95.38
GC content: 59.57
Gene sequence:
>564_bases ATGCAGACGCCACTTTGTAAAGACCTGGATACGCCGTTGCGTAAGGATCTGAACATGCCATTGTGCAGCGGCTTGGAAAC GCCGCTGCACCCCCAGACGCCGCTGCGCGTCCACCCGGAGACACCGTTGCGTGTCCATTCGGAAACACCGCTGCGTGCTC ACCAGGAAACGCCACTGCGTGGCGTGCGCACCAACATCGTGCAGTCGATTCGCGCCTTCCGCGTGCAGGACTTGCAAGAT GCCGCCACTGTCATGGGCCAGCATTTCCTGTACGCCAACCTGGCCCATGCGCAGTCCAAGCAGGATGTGCTCGACCTGAT TGCCGGGCAATTCATCTTCCCGGCGCATTTCGGCAAGAACTTTGATGCGCTGTACGACTGCATGACCGAGCCATTGCATC AATCGGGCCAGCAGCCCGGTTTCATCGTGGTGCTCGAGCAGATTCCGGCCACCGGCAAGTTCGACAAGGAGGCGCGCGAG CAGTTGCTCGATGTCTTTCGCGACGCTGCCGACTACTGGGGCGACCGAAAGATCCCGTTCCGGTGTTTCTATTCTTTTCT GTAG
Upstream 100 bases:
>100_bases CGGTGGCGCGCCCCACGAGCAAATCACCCATTCGCACAGGCGGCATCCCGCCGCCTTGCGAATGGCCGCAAGTTCTTGAT AAAGAAAGAGTAGCGCACAG
Downstream 100 bases:
>100_bases CCCGTTCTGCATCCACCAGCCAAGCAGAACGGGCGAACGAGGCGAACGGCACCCCGGCGGTCGCGGGCACGGCAGTCGAT GCCGACCCCACCGAGAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Barstar Family Protein; Ribonuclease Inhibitor; Ribonuclease Inhibitor Barstar
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MQTPLCKDLDTPLRKDLNMPLCSGLETPLHPQTPLRVHPETPLRVHSETPLRAHQETPLRGVRTNIVQSIRAFRVQDLQD AATVMGQHFLYANLAHAQSKQDVLDLIAGQFIFPAHFGKNFDALYDCMTEPLHQSGQQPGFIVVLEQIPATGKFDKEARE QLLDVFRDAADYWGDRKIPFRCFYSFL
Sequences:
>Translated_187_residues MQTPLCKDLDTPLRKDLNMPLCSGLETPLHPQTPLRVHPETPLRVHSETPLRAHQETPLRGVRTNIVQSIRAFRVQDLQD AATVMGQHFLYANLAHAQSKQDVLDLIAGQFIFPAHFGKNFDALYDCMTEPLHQSGQQPGFIVVLEQIPATGKFDKEARE QLLDVFRDAADYWGDRKIPFRCFYSFL >Mature_187_residues MQTPLCKDLDTPLRKDLNMPLCSGLETPLHPQTPLRVHPETPLRVHSETPLRAHQETPLRGVRTNIVQSIRAFRVQDLQD AATVMGQHFLYANLAHAQSKQDVLDLIAGQFIFPAHFGKNFDALYDCMTEPLHQSGQQPGFIVVLEQIPATGKFDKEARE QLLDVFRDAADYWGDRKIPFRCFYSFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21325; Mature: 21325
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTPLCKDLDTPLRKDLNMPLCSGLETPLHPQTPLRVHPETPLRVHSETPLRAHQETPLR CCCCCCCCCCCHHHHHCCCCHHCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCHH GVRTNIVQSIRAFRVQDLQDAATVMGQHFLYANLAHAQSKQDVLDLIAGQFIFPAHFGKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCCC FDALYDCMTEPLHQSGQQPGFIVVLEQIPATGKFDKEAREQLLDVFRDAADYWGDRKIPF HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHH RCFYSFL HHHHHCC >Mature Secondary Structure MQTPLCKDLDTPLRKDLNMPLCSGLETPLHPQTPLRVHPETPLRVHSETPLRAHQETPLR CCCCCCCCCCCHHHHHCCCCHHCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCHH GVRTNIVQSIRAFRVQDLQDAATVMGQHFLYANLAHAQSKQDVLDLIAGQFIFPAHFGKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCCC FDALYDCMTEPLHQSGQQPGFIVVLEQIPATGKFDKEAREQLLDVFRDAADYWGDRKIPF HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHH RCFYSFL HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA