| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
Click here to switch to the map view.
The map label for this gene is 121611667
Identifier: 121611667
GI number: 121611667
Start: 5257657
End: 5259003
Strand: Direct
Name: 121611667
Synonym: Veis_4763
Alternate gene names: NA
Gene position: 5257657-5259003 (Clockwise)
Preceding gene: 121611666
Following gene: 121611668
Centisome position: 94.45
GC content: 71.05
Gene sequence:
>1347_bases ATGCTCACCATCAAAAACATAGCTGCACGCGCATTGCTCATCGGCGCATCGACCCTCGTTCATTGCCATCCGGCCTGGGC GCTGCTGCCCATCGAGCATTGGACCGAGCCCAGCGGCGCCCGGGTCTGGCTGGTGCAAAGCCCGGCCATCCCGATGCTGG ACCTGCGCATCGACTTTGACGCCGGCAGCCGCCGCGACCCGGCCGCGCAGGCCGGCCTGGCCAGCGCCGTGGCGACCATG GCCGGCAAAGGCGTGCAAGGCACGGACACCGAGCCGCCGCTGGACGAAAACGGCCTGGGCCAAGCCTGGGCCGACCTGGG CGCCCGCTTTCAGGCCAACGCCGACAACGACGCGCTGCACTATGCGCTGCGCTCGCTGACCGACGCGCCGCTGCTCGCGC AGGCCGCGCGCCTGGCAGCCCGGCAGATCGCCGAACCCGCCTGGATCGACGCCCCGTGGCAGCGCGAGCGCGAGCGCTGG AGCGCCCGCCTCCGGGAAGACGACACCCGCCCCGCCAACGTGGCCGACCAGGCCTTTGCCGCCGCCGTGTACGGCCAGCA TCCCTATGGTGTGCGCGCCACGCCGCAAACGCTCGAGCGCATCGGCGTGGCCGACATGCAGGACTTTCACCGCCGGCATA TCGCCGCTTGCCGCGCGCGGGTGAGCATCGTCGGCGCCGTCTCGCGCGCGCAAGCGCAGACGCTGGTGGCCACGCTGCTG GCGCGCCTGCCCGCGACCCCGGACTGCGCGCCGCTGCCGGCCGTGGGCGAGGTCGCGGCCCTGGCGGCAGCGCTGGAGCG AAACATCCCGTTCGCCTCGGCCCAGGCCCACGTGCTCATCGGCCAGCCCGGCTTTGCGCGGCGCGACCCGGACTTTCTGG CGCTGCTGGTGGGCAACCACATTCTGGGCGGAGGCGGTTTTGTCTCGCGCCTGACCCACGAGGTGCGTGAACGGCGCGGC CTGAGCTACAACGTCTACAGCTACTTTGCCGCCGGTCTGCACGCCGGCGCCTTCACCGTGGGCCTGCAAACCCGCCCCGA CCAGGCCGCCGAGGCCGTCGGGATCGCGCGCGAAGTGATCGCCCGCTTTGTCGCCGACGGCCCCACCGAGGCCGAATTGC GCGCCGCCAAAGACCAGCTGATCGGCGGCTTTGCGCTGCGCATCGACAGCAACGAAAAACTGCTGGGCAATGTGGCCAAC ATCGCCTGGAACGACTTGCCGCTCGATTACCTGGAGCAATGGTCGAGCCAGGTGCAGGCCCTCACCGTCGCCGACGTGCG CGCCGCAATGGCCCGCAAACTGCAACCCGGGCGCATGGTGACCGTGGTGGTCGGTGGCCGGCCATGA
Upstream 100 bases:
>100_bases GCCACCTTGCTGCCGCAACCCCTGGCCCCACGCAAGCGCACTGCGCCCCTGTCGTCGCCCCACGACGCCGCCATCCGCTG AACCCGCCCGGGATCACCCC
Downstream 100 bases:
>100_bases GCGCCGCACGGCCGCCCGAAGGCGCTCATACCGTAGCCGAAGGCGAAGGTGCTCCATCCTTCGCCGCACGGCCGCCCGAA GGCACTCATACCGCAGCCGA
Product: peptidase M16 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MLTIKNIAARALLIGASTLVHCHPAWALLPIEHWTEPSGARVWLVQSPAIPMLDLRIDFDAGSRRDPAAQAGLASAVATM AGKGVQGTDTEPPLDENGLGQAWADLGARFQANADNDALHYALRSLTDAPLLAQAARLAARQIAEPAWIDAPWQRERERW SARLREDDTRPANVADQAFAAAVYGQHPYGVRATPQTLERIGVADMQDFHRRHIAACRARVSIVGAVSRAQAQTLVATLL ARLPATPDCAPLPAVGEVAALAAALERNIPFASAQAHVLIGQPGFARRDPDFLALLVGNHILGGGGFVSRLTHEVRERRG LSYNVYSYFAAGLHAGAFTVGLQTRPDQAAEAVGIAREVIARFVADGPTEAELRAAKDQLIGGFALRIDSNEKLLGNVAN IAWNDLPLDYLEQWSSQVQALTVADVRAAMARKLQPGRMVTVVVGGRP
Sequences:
>Translated_448_residues MLTIKNIAARALLIGASTLVHCHPAWALLPIEHWTEPSGARVWLVQSPAIPMLDLRIDFDAGSRRDPAAQAGLASAVATM AGKGVQGTDTEPPLDENGLGQAWADLGARFQANADNDALHYALRSLTDAPLLAQAARLAARQIAEPAWIDAPWQRERERW SARLREDDTRPANVADQAFAAAVYGQHPYGVRATPQTLERIGVADMQDFHRRHIAACRARVSIVGAVSRAQAQTLVATLL ARLPATPDCAPLPAVGEVAALAAALERNIPFASAQAHVLIGQPGFARRDPDFLALLVGNHILGGGGFVSRLTHEVRERRG LSYNVYSYFAAGLHAGAFTVGLQTRPDQAAEAVGIAREVIARFVADGPTEAELRAAKDQLIGGFALRIDSNEKLLGNVAN IAWNDLPLDYLEQWSSQVQALTVADVRAAMARKLQPGRMVTVVVGGRP >Mature_448_residues MLTIKNIAARALLIGASTLVHCHPAWALLPIEHWTEPSGARVWLVQSPAIPMLDLRIDFDAGSRRDPAAQAGLASAVATM AGKGVQGTDTEPPLDENGLGQAWADLGARFQANADNDALHYALRSLTDAPLLAQAARLAARQIAEPAWIDAPWQRERERW SARLREDDTRPANVADQAFAAAVYGQHPYGVRATPQTLERIGVADMQDFHRRHIAACRARVSIVGAVSRAQAQTLVATLL ARLPATPDCAPLPAVGEVAALAAALERNIPFASAQAHVLIGQPGFARRDPDFLALLVGNHILGGGGFVSRLTHEVRERRG LSYNVYSYFAAGLHAGAFTVGLQTRPDQAAEAVGIAREVIARFVADGPTEAELRAAKDQLIGGFALRIDSNEKLLGNVAN IAWNDLPLDYLEQWSSQVQALTVADVRAAMARKLQPGRMVTVVVGGRP
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 48021; Mature: 48021
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTIKNIAARALLIGASTLVHCHPAWALLPIEHWTEPSGARVWLVQSPAIPMLDLRIDFD CCCHHHHHHHHHHHCCHHEEEECCCEEEEEHHHCCCCCCCEEEEEECCCCCEEEEEEECC AGSRRDPAAQAGLASAVATMAGKGVQGTDTEPPLDENGLGQAWADLGARFQANADNDALH CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCEEECCCCCHHHH YALRSLTDAPLLAQAARLAARQIAEPAWIDAPWQRERERWSARLREDDTRPANVADQAFA HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH AAVYGQHPYGVRATPQTLERIGVADMQDFHRRHIAACRARVSIVGAVSRAQAQTLVATLL HHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLPATPDCAPLPAVGEVAALAAALERNIPFASAQAHVLIGQPGFARRDPDFLALLVGNH HHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCE ILGGGGFVSRLTHEVRERRGLSYNVYSYFAAGLHAGAFTVGLQTRPDQAAEAVGIAREVI EECCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH ARFVADGPTEAELRAAKDQLIGGFALRIDSNEKLLGNVANIAWNDLPLDYLEQWSSQVQA HHHHHCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH LTVADVRAAMARKLQPGRMVTVVVGGRP HHHHHHHHHHHHHCCCCCEEEEEECCCC >Mature Secondary Structure MLTIKNIAARALLIGASTLVHCHPAWALLPIEHWTEPSGARVWLVQSPAIPMLDLRIDFD CCCHHHHHHHHHHHCCHHEEEECCCEEEEEHHHCCCCCCCEEEEEECCCCCEEEEEEECC AGSRRDPAAQAGLASAVATMAGKGVQGTDTEPPLDENGLGQAWADLGARFQANADNDALH CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCEEECCCCCHHHH YALRSLTDAPLLAQAARLAARQIAEPAWIDAPWQRERERWSARLREDDTRPANVADQAFA HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH AAVYGQHPYGVRATPQTLERIGVADMQDFHRRHIAACRARVSIVGAVSRAQAQTLVATLL HHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLPATPDCAPLPAVGEVAALAAALERNIPFASAQAHVLIGQPGFARRDPDFLALLVGNH HHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCE ILGGGGFVSRLTHEVRERRGLSYNVYSYFAAGLHAGAFTVGLQTRPDQAAEAVGIAREVI EECCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHH ARFVADGPTEAELRAAKDQLIGGFALRIDSNEKLLGNVANIAWNDLPLDYLEQWSSQVQA HHHHHCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH LTVADVRAAMARKLQPGRMVTVVVGGRP HHHHHHHHHHHHHCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]