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The map label for this gene is yliB [C]

Identifier: 121611632

GI number: 121611632

Start: 5214749

End: 5216338

Strand: Direct

Name: yliB [C]

Synonym: Veis_4726

Alternate gene names: 121611632

Gene position: 5214749-5216338 (Clockwise)

Preceding gene: 121611631

Following gene: 121611633

Centisome position: 93.68

GC content: 61.51

Gene sequence:

>1590_bases
ATGCCACCTTCAACCTCTCTGCCACGTCTGACAGCGCCAGCGGTTTTCCTGCTGCTGGCTGCAATGAGCGCAATGGGGGC
AATGGGGGCAACATCGACCCACGCACCGGCGCACATCGTGGTGGCGCAACCGGCGGATATCCGCTCCACCAATCCCGGTG
TCAATCGGGACAATACCACTGACGGCGTGCTGCTCAACATGCTCGAAGGTCTGGTCGGCTACCATGAAAATGGCTCGGTC
GGACCCTTGCTGGCCAAGGCCATCGATGTCAGCGCCGATGGCCTGACCTACACCTTCACGCTGCGCACCGGCGTGAAGTT
CCACAACGGCGAGCACATGACCTCTGCCGACGTGCTGTGGAGCTGGAATCGCTACATGAATCCCAAAACCGACTGGCGCT
GCCTGAACGATTTCGACGGGCATGCGGGCACCAGGGTGGTGTCGGCGAGCGCGCCCGATGCGCAAACCTTCGTGCTGCAA
ATCGACAAGCCCTCGGCGATTTTTCTGGACAATCTGGCGCGCACCGACTGCGCCATGGCCGCCGTGATCAGCAAAAAATC
GGTGCGGCAAGATGGCAGTTGGGACAAGCCCATCGGCACCGGCCCCTACAAGCTCGATGAATGGAAGCGCGGCGAATATG
TCGCCATGAGCGCCTTCGCGGATTACCAGTCGCCGCCGGGCAACGAGCCGGACGGCTATCTCGGCCTGAAGAAGCCGCAG
ATTGCGCAGGTCAAGTTTCTGGTCGTGCCAGACCTGTCTGCCGCCAAGGCCGGCCTGCAATCGGGCGCCATCGATGCCGG
CCAGATCACTTCGTCCGATGTCAAGGAGTTGAGGGCGCATCGCCATCTGCGCGTGATCGTGCCCGGCGAAGCCAGCAAGA
ACACCTTGCTGATGCAAACCCATGATCCGGTGCTCAAGGATGAACGCATCCGTTTGGCCATCGCGCTATCGCTGGACATG
CGGCAGATCGTCGAAGCGGCGTCCGAAGGCCTGGCCCAGGTCAACAACTCGGCCATCCACGGCAAGTCGCTGTTTTACAG
CGCGCAGCAAAAAAAGGGCTACCCCTACGACCCGGCCAAGGCCAGACTGCTGCTGCAACAGGCCGGCTATCGCGGCCAGC
CCATTGTGATTCAGGCCAACAAGCGCGCGCATGTGCCGAGCTACACCGTTGCCGTGCTAAGCCAGGCGATGATGCAGGCG
GCGGGCATCAATGCGCAGATCGAAGTGCTGGAGTGGGCCACGCAACTCGATCGCTACAACAGCGGCAACTACCAGATGAG
TTCCTTCACCTATTCCTCGCGCCTCGACCCGGCGTTGAGTTATGAGCAGTTCTCCGGCAGCAAGGCCGTGCAGCCGCGCA
AGGTCTGGGACGATCCCGATGCGCAAAGGCTGATCGTGCAGAGCTTCGTCGAAGCCGACAGCAAAAAACGCCAGGCGCTG
TTCGACCAATTGCACGCCATGATGATGCGCCAGACGCCGCTGATCGTGCTGTACAACACGTCAGGCGCCTGGGCCATACG
CAAGCGTGTGAACGGCTACACCGTCTGGGAAGGCAAGCCCCTGATGTGGACCGCCAGCGTGAAAGACTGA

Upstream 100 bases:

>100_bases
TGACGCAGATTCACACGGAGTGGGAAACAGGCTGAACTGAATTTCATCCATCGATACGAAGATCGACAAGACTTCACCCA
CCTTCATCGAGGAAGCCGCC

Downstream 100 bases:

>100_bases
AGCCGCCGCGCCAGCGGGCAGCAGCGCGGCGCATCGATACCATTTACTCCCGAATCCAGACACCATGACGACGACCATCG
CACAGTTTCCTTTCATCTCC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MPPSTSLPRLTAPAVFLLLAAMSAMGAMGATSTHAPAHIVVAQPADIRSTNPGVNRDNTTDGVLLNMLEGLVGYHENGSV
GPLLAKAIDVSADGLTYTFTLRTGVKFHNGEHMTSADVLWSWNRYMNPKTDWRCLNDFDGHAGTRVVSASAPDAQTFVLQ
IDKPSAIFLDNLARTDCAMAAVISKKSVRQDGSWDKPIGTGPYKLDEWKRGEYVAMSAFADYQSPPGNEPDGYLGLKKPQ
IAQVKFLVVPDLSAAKAGLQSGAIDAGQITSSDVKELRAHRHLRVIVPGEASKNTLLMQTHDPVLKDERIRLAIALSLDM
RQIVEAASEGLAQVNNSAIHGKSLFYSAQQKKGYPYDPAKARLLLQQAGYRGQPIVIQANKRAHVPSYTVAVLSQAMMQA
AGINAQIEVLEWATQLDRYNSGNYQMSSFTYSSRLDPALSYEQFSGSKAVQPRKVWDDPDAQRLIVQSFVEADSKKRQAL
FDQLHAMMMRQTPLIVLYNTSGAWAIRKRVNGYTVWEGKPLMWTASVKD

Sequences:

>Translated_529_residues
MPPSTSLPRLTAPAVFLLLAAMSAMGAMGATSTHAPAHIVVAQPADIRSTNPGVNRDNTTDGVLLNMLEGLVGYHENGSV
GPLLAKAIDVSADGLTYTFTLRTGVKFHNGEHMTSADVLWSWNRYMNPKTDWRCLNDFDGHAGTRVVSASAPDAQTFVLQ
IDKPSAIFLDNLARTDCAMAAVISKKSVRQDGSWDKPIGTGPYKLDEWKRGEYVAMSAFADYQSPPGNEPDGYLGLKKPQ
IAQVKFLVVPDLSAAKAGLQSGAIDAGQITSSDVKELRAHRHLRVIVPGEASKNTLLMQTHDPVLKDERIRLAIALSLDM
RQIVEAASEGLAQVNNSAIHGKSLFYSAQQKKGYPYDPAKARLLLQQAGYRGQPIVIQANKRAHVPSYTVAVLSQAMMQA
AGINAQIEVLEWATQLDRYNSGNYQMSSFTYSSRLDPALSYEQFSGSKAVQPRKVWDDPDAQRLIVQSFVEADSKKRQAL
FDQLHAMMMRQTPLIVLYNTSGAWAIRKRVNGYTVWEGKPLMWTASVKD
>Mature_528_residues
PPSTSLPRLTAPAVFLLLAAMSAMGAMGATSTHAPAHIVVAQPADIRSTNPGVNRDNTTDGVLLNMLEGLVGYHENGSVG
PLLAKAIDVSADGLTYTFTLRTGVKFHNGEHMTSADVLWSWNRYMNPKTDWRCLNDFDGHAGTRVVSASAPDAQTFVLQI
DKPSAIFLDNLARTDCAMAAVISKKSVRQDGSWDKPIGTGPYKLDEWKRGEYVAMSAFADYQSPPGNEPDGYLGLKKPQI
AQVKFLVVPDLSAAKAGLQSGAIDAGQITSSDVKELRAHRHLRVIVPGEASKNTLLMQTHDPVLKDERIRLAIALSLDMR
QIVEAASEGLAQVNNSAIHGKSLFYSAQQKKGYPYDPAKARLLLQQAGYRGQPIVIQANKRAHVPSYTVAVLSQAMMQAA
GINAQIEVLEWATQLDRYNSGNYQMSSFTYSSRLDPALSYEQFSGSKAVQPRKVWDDPDAQRLIVQSFVEADSKKRQALF
DQLHAMMMRQTPLIVLYNTSGAWAIRKRVNGYTVWEGKPLMWTASVKD

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=395, Percent_Identity=26.3291139240506, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1789966, Length=492, Percent_Identity=26.4227642276423, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI87081878, Length=484, Percent_Identity=25.2066115702479, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI1789397, Length=492, Percent_Identity=22.1544715447154, Blast_Score=105, Evalue=9e-24,
Organism=Escherichia coli, GI1787762, Length=493, Percent_Identity=21.9066937119675, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1787551, Length=466, Percent_Identity=24.2489270386266, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1787495, Length=554, Percent_Identity=20.5776173285199, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 57949; Mature: 57817

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPSTSLPRLTAPAVFLLLAAMSAMGAMGATSTHAPAHIVVAQPADIRSTNPGVNRDNTT
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
DGVLLNMLEGLVGYHENGSVGPLLAKAIDVSADGLTYTFTLRTGVKFHNGEHMTSADVLW
HHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCEEECCCCCCCCHHHEE
SWNRYMNPKTDWRCLNDFDGHAGTRVVSASAPDAQTFVLQIDKPSAIFLDNLARTDCAMA
EHHHCCCCCCCCEECCCCCCCCCCEEEECCCCCCEEEEEEECCCCEEEHHHHHHHHHHHH
AVISKKSVRQDGSWDKPIGTGPYKLDEWKRGEYVAMSAFADYQSPPGNEPDGYLGLKKPQ
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCEECCCCCC
IAQVKFLVVPDLSAAKAGLQSGAIDAGQITSSDVKELRAHRHLRVIVPGEASKNTLLMQT
EEEEEEEEECCCHHHHHCHHCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCEEEEEC
HDPVLKDERIRLAIALSLDMRQIVEAASEGLAQVNNSAIHGKSLFYSAQQKKGYPYDPAK
CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHEEEHHHCCCCCCCHHH
ARLLLQQAGYRGQPIVIQANKRAHVPSYTVAVLSQAMMQAAGINAQIEVLEWATQLDRYN
HHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCC
SGNYQMSSFTYSSRLDPALSYEQFSGSKAVQPRKVWDDPDAQRLIVQSFVEADSKKRQAL
CCCEEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHH
FDQLHAMMMRQTPLIVLYNTSGAWAIRKRVNGYTVWEGKPLMWTASVKD
HHHHHHHHHHCCCEEEEECCCCCEEEEECCCCEEEECCCCEEEEECCCC
>Mature Secondary Structure 
PPSTSLPRLTAPAVFLLLAAMSAMGAMGATSTHAPAHIVVAQPADIRSTNPGVNRDNTT
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
DGVLLNMLEGLVGYHENGSVGPLLAKAIDVSADGLTYTFTLRTGVKFHNGEHMTSADVLW
HHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCEEECCCCCCCCHHHEE
SWNRYMNPKTDWRCLNDFDGHAGTRVVSASAPDAQTFVLQIDKPSAIFLDNLARTDCAMA
EHHHCCCCCCCCEECCCCCCCCCCEEEECCCCCCEEEEEEECCCCEEEHHHHHHHHHHHH
AVISKKSVRQDGSWDKPIGTGPYKLDEWKRGEYVAMSAFADYQSPPGNEPDGYLGLKKPQ
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCCCCCEECCCCCC
IAQVKFLVVPDLSAAKAGLQSGAIDAGQITSSDVKELRAHRHLRVIVPGEASKNTLLMQT
EEEEEEEEECCCHHHHHCHHCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCEEEEEC
HDPVLKDERIRLAIALSLDMRQIVEAASEGLAQVNNSAIHGKSLFYSAQQKKGYPYDPAK
CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHEEEHHHCCCCCCCHHH
ARLLLQQAGYRGQPIVIQANKRAHVPSYTVAVLSQAMMQAAGINAQIEVLEWATQLDRYN
HHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCC
SGNYQMSSFTYSSRLDPALSYEQFSGSKAVQPRKVWDDPDAQRLIVQSFVEADSKKRQAL
CCCEEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHH
FDQLHAMMMRQTPLIVLYNTSGAWAIRKRVNGYTVWEGKPLMWTASVKD
HHHHHHHHHHCCCEEEEECCCCCEEEEECCCCEEEECCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA