| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is fabG [H]
Identifier: 121611610
GI number: 121611610
Start: 5192577
End: 5193353
Strand: Direct
Name: fabG [H]
Synonym: Veis_4702
Alternate gene names: 121611610
Gene position: 5192577-5193353 (Clockwise)
Preceding gene: 121611609
Following gene: 121611611
Centisome position: 93.28
GC content: 69.24
Gene sequence:
>777_bases ATGGACATCGGCCTCAACGGCAAGCGCGTGCTGGTCACCGCAGGCGCACAGGGCATCGGCCTGGCGATCACCGAGGCCTT CGTGGCCGCAGGCGCGCAGGTGCACATCTGCGACGTCGACGAGGGCTTCTTGGCCCAGGCGACGCGGCAACTGCCGCAGC TCTGCCACAGCCGCACCGACGTCTCCGACGCCGCCCAGGTCGATGCCATGTTCGCCGGCATCGCCGAGCGCTGGGGCAGG CTGGACGTGCTGGTCAACAACGCAGGCATCGCCGGCCCCACCTCCGCAGTGGAGGACACGGCGCTGGCCGACTGGGAGCA GACCATCGCCGTCAACCTGACCGGCCCCTTCCTCTGCACGCGGCGCGCCGTGCCGCTGCTCAAGGCGGCGGGCGGGGGCT CCATCGTCAACCTGTCGTCGGCGGCGGGTCGGCTGGGCTTTCCGCTGCGCACCCCGTATTCGGCATCCAAGTTCGGCGTC ATCGGTCTGACGGAAAGCTGGGCCATGGAGCTGGGGCCCTCTCGCATCCGCGTCAACGCCATCCTGCCGGGCATCGTCGC CGGCGCGCGGCAGGAGCGCGTGATCGCCGCCAGGGCGGCCTCTTATGGCATCGACCATGAAGCGATGCGCGAGAGGCTGC TGTCCAAGGTGTCGCTGCGCAGCATGGTCACGGCGCAGGACATCGCCAACCAGATCGTTTTCATCTGCTCGCCGGCGGGC GCGACGATCAGCGGCCAAAGCCTTTCGGTGTGCGGCAACGTCGAACATCTGGGCTGA
Upstream 100 bases:
>100_bases CGCTGTGTTCCACACCGGACCGGCCGCGCCGCTGCTGACCGATCTCACCTACCGCAAGCAAATTCTCTGGCTCTGAACCC ACTTCGACAAAGGACTTCTC
Downstream 100 bases:
>100_bases GCCGATGCAAGACCGCATTGCCATCGTCGGTGCCGGGCTCATCGGCCGCGCCTGGGCCATCGTGTTCGCGCGCGCCGGTT GCCAGGTGCGTCTGCACGAC
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MDIGLNGKRVLVTAGAQGIGLAITEAFVAAGAQVHICDVDEGFLAQATRQLPQLCHSRTDVSDAAQVDAMFAGIAERWGR LDVLVNNAGIAGPTSAVEDTALADWEQTIAVNLTGPFLCTRRAVPLLKAAGGGSIVNLSSAAGRLGFPLRTPYSASKFGV IGLTESWAMELGPSRIRVNAILPGIVAGARQERVIAARAASYGIDHEAMRERLLSKVSLRSMVTAQDIANQIVFICSPAG ATISGQSLSVCGNVEHLG
Sequences:
>Translated_258_residues MDIGLNGKRVLVTAGAQGIGLAITEAFVAAGAQVHICDVDEGFLAQATRQLPQLCHSRTDVSDAAQVDAMFAGIAERWGR LDVLVNNAGIAGPTSAVEDTALADWEQTIAVNLTGPFLCTRRAVPLLKAAGGGSIVNLSSAAGRLGFPLRTPYSASKFGV IGLTESWAMELGPSRIRVNAILPGIVAGARQERVIAARAASYGIDHEAMRERLLSKVSLRSMVTAQDIANQIVFICSPAG ATISGQSLSVCGNVEHLG >Mature_258_residues MDIGLNGKRVLVTAGAQGIGLAITEAFVAAGAQVHICDVDEGFLAQATRQLPQLCHSRTDVSDAAQVDAMFAGIAERWGR LDVLVNNAGIAGPTSAVEDTALADWEQTIAVNLTGPFLCTRRAVPLLKAAGGGSIVNLSSAAGRLGFPLRTPYSASKFGV IGLTESWAMELGPSRIRVNAILPGIVAGARQERVIAARAASYGIDHEAMRERLLSKVSLRSMVTAQDIANQIVFICSPAG ATISGQSLSVCGNVEHLG
Specific function: Sorbitol metabolism. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=256, Percent_Identity=30.078125, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI15277342, Length=257, Percent_Identity=31.5175097276265, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI31542939, Length=207, Percent_Identity=34.7826086956522, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI59889578, Length=230, Percent_Identity=32.1739130434783, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI19923817, Length=257, Percent_Identity=28.0155642023346, Blast_Score=95, Evalue=5e-20, Organism=Homo sapiens, GI66933014, Length=249, Percent_Identity=33.3333333333333, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI224922801, Length=177, Percent_Identity=33.8983050847458, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI4503817, Length=191, Percent_Identity=33.5078534031414, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI126723191, Length=185, Percent_Identity=31.8918918918919, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI7705925, Length=253, Percent_Identity=28.8537549407115, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI20149619, Length=205, Percent_Identity=27.8048780487805, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI5031737, Length=250, Percent_Identity=26.8, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI109715829, Length=246, Percent_Identity=27.6422764227642, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI126723750, Length=259, Percent_Identity=25.4826254826255, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI4758504, Length=193, Percent_Identity=33.160621761658, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI302344755, Length=103, Percent_Identity=36.8932038834951, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI40254992, Length=246, Percent_Identity=28.0487804878049, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI4504505, Length=209, Percent_Identity=33.4928229665072, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI44680136, Length=107, Percent_Identity=39.2523364485981, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI44680133, Length=107, Percent_Identity=39.2523364485981, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI17738292, Length=107, Percent_Identity=39.2523364485981, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI10190704, Length=254, Percent_Identity=26.3779527559055, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI33667109, Length=184, Percent_Identity=29.8913043478261, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI210032110, Length=187, Percent_Identity=26.2032085561497, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI209862901, Length=197, Percent_Identity=31.9796954314721, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI19923983, Length=197, Percent_Identity=31.9796954314721, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI83715985, Length=181, Percent_Identity=32.0441988950276, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI223718074, Length=200, Percent_Identity=32.5, Blast_Score=65, Evalue=4e-11, Organism=Escherichia coli, GI1789057, Length=250, Percent_Identity=29.6, Blast_Score=114, Evalue=7e-27, Organism=Escherichia coli, GI1787905, Length=255, Percent_Identity=29.8039215686275, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI87082160, Length=256, Percent_Identity=31.25, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI87082100, Length=249, Percent_Identity=31.3253012048193, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1788459, Length=178, Percent_Identity=33.1460674157303, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1786812, Length=258, Percent_Identity=32.5581395348837, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI2367175, Length=257, Percent_Identity=30.7392996108949, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1787335, Length=256, Percent_Identity=29.296875, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1790717, Length=252, Percent_Identity=29.7619047619048, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1787820, Length=182, Percent_Identity=30.2197802197802, Blast_Score=80, Evalue=9e-17, Organism=Escherichia coli, GI1789208, Length=258, Percent_Identity=28.2945736434109, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI2367365, Length=255, Percent_Identity=26.2745098039216, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1789378, Length=267, Percent_Identity=24.3445692883895, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787526, Length=187, Percent_Identity=30.4812834224599, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1787545, Length=265, Percent_Identity=27.9245283018868, Blast_Score=61, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17555706, Length=251, Percent_Identity=33.0677290836653, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI25147288, Length=264, Percent_Identity=32.1969696969697, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17560676, Length=254, Percent_Identity=28.740157480315, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17561402, Length=257, Percent_Identity=25.2918287937743, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17538182, Length=187, Percent_Identity=35.8288770053476, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI115534694, Length=253, Percent_Identity=29.6442687747036, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17559104, Length=264, Percent_Identity=29.5454545454545, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71994604, Length=179, Percent_Identity=31.8435754189944, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI71994600, Length=196, Percent_Identity=31.6326530612245, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI72000259, Length=262, Percent_Identity=27.4809160305344, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17564282, Length=183, Percent_Identity=30.6010928961749, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17544670, Length=274, Percent_Identity=27.3722627737226, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17536025, Length=264, Percent_Identity=28.4090909090909, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17562904, Length=194, Percent_Identity=30.9278350515464, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI193203117, Length=175, Percent_Identity=26.8571428571429, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17538480, Length=199, Percent_Identity=29.1457286432161, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17562910, Length=194, Percent_Identity=26.8041237113402, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193203115, Length=171, Percent_Identity=27.4853801169591, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17536651, Length=263, Percent_Identity=26.9961977186312, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17508895, Length=177, Percent_Identity=28.2485875706215, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI17560150, Length=196, Percent_Identity=29.0816326530612, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17551412, Length=193, Percent_Identity=27.979274611399, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17568967, Length=115, Percent_Identity=35.6521739130435, Blast_Score=65, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=29.4339622641509, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17562908, Length=262, Percent_Identity=30.1526717557252, Blast_Score=64, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17562990, Length=192, Percent_Identity=27.0833333333333, Blast_Score=64, Evalue=6e-11, Organism=Caenorhabditis elegans, GI32563809, Length=110, Percent_Identity=36.3636363636364, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=263, Percent_Identity=28.5171102661597, Blast_Score=96, Evalue=6e-21, Organism=Saccharomyces cerevisiae, GI6323882, Length=195, Percent_Identity=30.2564102564103, Blast_Score=83, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6322861, Length=194, Percent_Identity=28.3505154639175, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI21355319, Length=252, Percent_Identity=30.952380952381, Blast_Score=110, Evalue=7e-25, Organism=Drosophila melanogaster, GI24644339, Length=254, Percent_Identity=29.1338582677165, Blast_Score=91, Evalue=7e-19, Organism=Drosophila melanogaster, GI23397609, Length=260, Percent_Identity=27.6923076923077, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24643142, Length=253, Percent_Identity=30.8300395256917, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24644337, Length=258, Percent_Identity=32.1705426356589, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI21356301, Length=186, Percent_Identity=31.7204301075269, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI21357041, Length=255, Percent_Identity=29.4117647058824, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI28571526, Length=264, Percent_Identity=28.4090909090909, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI24639444, Length=264, Percent_Identity=28.030303030303, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI281364494, Length=194, Percent_Identity=33.5051546391753, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI221331218, Length=191, Percent_Identity=31.9371727748691, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24665243, Length=191, Percent_Identity=31.9371727748691, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI116007236, Length=243, Percent_Identity=27.5720164609054, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI281364892, Length=188, Percent_Identity=30.8510638297872, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI221331216, Length=192, Percent_Identity=31.7708333333333, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24665247, Length=192, Percent_Identity=31.7708333333333, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI18859837, Length=106, Percent_Identity=39.622641509434, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI116007238, Length=206, Percent_Identity=29.126213592233, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI17737361, Length=187, Percent_Identity=31.0160427807487, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI24641232, Length=192, Percent_Identity=31.7708333333333, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI28571387, Length=195, Percent_Identity=32.3076923076923, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI21358495, Length=207, Percent_Identity=25.6038647342995, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24665264, Length=221, Percent_Identity=27.6018099547511, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 26832; Mature: 26832
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIGLNGKRVLVTAGAQGIGLAITEAFVAAGAQVHICDVDEGFLAQATRQLPQLCHSRTD CCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCC VSDAAQVDAMFAGIAERWGRLDVLVNNAGIAGPTSAVEDTALADWEQTIAVNLTGPFLCT CHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCHHHH RRAVPLLKAAGGGSIVNLSSAAGRLGFPLRTPYSASKFGVIGLTESWAMELGPSRIRVNA HHCCHHEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHCCCCEEEEEE ILPGIVAGARQERVIAARAASYGIDHEAMRERLLSKVSLRSMVTAQDIANQIVFICSPAG ECCHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC ATISGQSLSVCGNVEHLG CEECCCCEEEECCCCCCC >Mature Secondary Structure MDIGLNGKRVLVTAGAQGIGLAITEAFVAAGAQVHICDVDEGFLAQATRQLPQLCHSRTD CCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCC VSDAAQVDAMFAGIAERWGRLDVLVNNAGIAGPTSAVEDTALADWEQTIAVNLTGPFLCT CHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCHHHH RRAVPLLKAAGGGSIVNLSSAAGRLGFPLRTPYSASKFGVIGLTESWAMELGPSRIRVNA HHCCHHEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHCCCCEEEEEE ILPGIVAGARQERVIAARAASYGIDHEAMRERLLSKVSLRSMVTAQDIANQIVFICSPAG ECCHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC ATISGQSLSVCGNVEHLG CEECCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]