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The map label for this gene is 121611604

Identifier: 121611604

GI number: 121611604

Start: 5184712

End: 5186229

Strand: Direct

Name: 121611604

Synonym: Veis_4696

Alternate gene names: NA

Gene position: 5184712-5186229 (Clockwise)

Preceding gene: 121611603

Following gene: 121611605

Centisome position: 93.14

GC content: 68.45

Gene sequence:

>1518_bases
ATGCGCCAGATACGACAAGTTCTTCGCCTGCACCTGGATGCAGGCCTTCCCTATGCGAAGGTCGCCCGCGCGCTTGGCCT
GCCGAAGTCCGCCGTGGGCAAGTTCGCACTGCTGGCGCGCGCCGCCGGCGTCGATTGGGCTGTTGCTCAGACGCTCACCG
ACCAAGAGCTCGAAGCCCGGCTGTACCGCTCGGCGGTGCCGCGTGCGGCGCACCACCTGGAACCCGACTACGCGCTCATC
CACCAGGAGCTCAAGCGCCCCGGCGTCACGCTGCAGCTGCTCTGGAAGGAGTACGCCCAGGCCAACGCGCTGGCCTACAA
GTACACCAGCTTTTGCATCAAGTACCGCGCCTGGGCGCTGGGCCTGAAGCGCTCGATGCGACAGACCCACATCGCCGGCG
ACAAGCTCTTCGTCGACTACGACGGCGACACCGTGCCGATCGTGGACGCGGCCACCGGCGAGATTCGCCAGGCACAGATC
TTTGTGGCGGCCCTGGGTGCCTCCAGCTACACCTATGCCTGCGCCACCATGACGCAGACGGCGCCCGACTGGGTCGCCTC
GATCATGAACGCGCTGGAGTTCATCGGCGGCGTGCCGCGGCTGGTGGTGCCCGACCAGCCACGCGCCGTCGTCGCACGGC
CCGACCGCTACGAGCCCGGCCTGGGCCGCCTGGTCGAGGAGTTCTGCGATCACTACAGCGTGGCGATGCTCCCGGCACGC
CCGGCGCGCCCGAAGGACAAGCCCAAGGTCGAAGTCGCGGTGCAAATCGTCCAGCGATGGATTCTCGCGCGGCTTCGCAA
CCGCCGCTTCTTCAGCCTGGGCGAGCTCAACTGCGCTCTCGCCGACTTGCTGGCCGATCTGAACCAGCGCCCCTTCAAGA
AGCTGCCAGGCTGCCGACGCGAGGCCTTCGAGAAGTTGGACAAGCCGGCGCTGCGTGCGCTGCCGCCCGCGCGCATGCCC
ATCGTGCGCTTCAAGAGCGCCCGCGTGAACATTGACTATCACGTCGACCTCGGCGGCCACTACTACAGCGTGCCGCACCG
ACTGGTGCGCACCACGGTGGAGTTGCGCATCGCCGGCGCGACGCTGGAGATCTTCGCCGGCCAGCAGCGCGTGGCCGTGC
ACCCGGTGAGCACTGCCAAGGGCAAGCACTCGACTATCTCCGAGCACATGCCGGCCTCGCACCGCGCCCATCTGGAGTGG
ACGCCGGCCAAGCTCATTGCCTGGGGCGAGCGCATCGGCGTGGGGTGCGCTGCGCTCGTGCGCTGGCAGATGGACAACCG
CCCGCACCCGGGGCAAGGCTACCGCTGCTGCCTGGGCCTGCAGCGCCTGGCGCGCCAGCACGGCCACGAACGCCTGGAAG
CCGCGTGCACGCGGGCGATGGCCATCCATTCGCCGATCTACCGCAGCGTCAACTCGATTCTGGCCAGCGGCACGGACCGC
CAGCCACTGCCGGCCCAGTCGACCCAGACCTCGCTGCCGCTGCACGAGAACGTGCGTGGCCCTGATTACTACCACTGA

Upstream 100 bases:

>100_bases
TTGATCGTGGACGATTCAGGCGCGCGGGAGTGATCCGACCGCGGGCATAGGCCCACCGCTTTTTTTGCGGACCAGACCTA
TGTCCACTCCGAGGATCACG

Downstream 100 bases:

>100_bases
AGGAGAACCTGTGATCCCTGCCCACACCCTGGACCAACTCAAGGCGCTGCGCCTGGACGGCATGGTGGCTGCGTTGAGCG
ACCAAGCCATCAGCAGTGCG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MRQIRQVLRLHLDAGLPYAKVARALGLPKSAVGKFALLARAAGVDWAVAQTLTDQELEARLYRSAVPRAAHHLEPDYALI
HQELKRPGVTLQLLWKEYAQANALAYKYTSFCIKYRAWALGLKRSMRQTHIAGDKLFVDYDGDTVPIVDAATGEIRQAQI
FVAALGASSYTYACATMTQTAPDWVASIMNALEFIGGVPRLVVPDQPRAVVARPDRYEPGLGRLVEEFCDHYSVAMLPAR
PARPKDKPKVEVAVQIVQRWILARLRNRRFFSLGELNCALADLLADLNQRPFKKLPGCRREAFEKLDKPALRALPPARMP
IVRFKSARVNIDYHVDLGGHYYSVPHRLVRTTVELRIAGATLEIFAGQQRVAVHPVSTAKGKHSTISEHMPASHRAHLEW
TPAKLIAWGERIGVGCAALVRWQMDNRPHPGQGYRCCLGLQRLARQHGHERLEAACTRAMAIHSPIYRSVNSILASGTDR
QPLPAQSTQTSLPLHENVRGPDYYH

Sequences:

>Translated_505_residues
MRQIRQVLRLHLDAGLPYAKVARALGLPKSAVGKFALLARAAGVDWAVAQTLTDQELEARLYRSAVPRAAHHLEPDYALI
HQELKRPGVTLQLLWKEYAQANALAYKYTSFCIKYRAWALGLKRSMRQTHIAGDKLFVDYDGDTVPIVDAATGEIRQAQI
FVAALGASSYTYACATMTQTAPDWVASIMNALEFIGGVPRLVVPDQPRAVVARPDRYEPGLGRLVEEFCDHYSVAMLPAR
PARPKDKPKVEVAVQIVQRWILARLRNRRFFSLGELNCALADLLADLNQRPFKKLPGCRREAFEKLDKPALRALPPARMP
IVRFKSARVNIDYHVDLGGHYYSVPHRLVRTTVELRIAGATLEIFAGQQRVAVHPVSTAKGKHSTISEHMPASHRAHLEW
TPAKLIAWGERIGVGCAALVRWQMDNRPHPGQGYRCCLGLQRLARQHGHERLEAACTRAMAIHSPIYRSVNSILASGTDR
QPLPAQSTQTSLPLHENVRGPDYYH
>Mature_505_residues
MRQIRQVLRLHLDAGLPYAKVARALGLPKSAVGKFALLARAAGVDWAVAQTLTDQELEARLYRSAVPRAAHHLEPDYALI
HQELKRPGVTLQLLWKEYAQANALAYKYTSFCIKYRAWALGLKRSMRQTHIAGDKLFVDYDGDTVPIVDAATGEIRQAQI
FVAALGASSYTYACATMTQTAPDWVASIMNALEFIGGVPRLVVPDQPRAVVARPDRYEPGLGRLVEEFCDHYSVAMLPAR
PARPKDKPKVEVAVQIVQRWILARLRNRRFFSLGELNCALADLLADLNQRPFKKLPGCRREAFEKLDKPALRALPPARMP
IVRFKSARVNIDYHVDLGGHYYSVPHRLVRTTVELRIAGATLEIFAGQQRVAVHPVSTAKGKHSTISEHMPASHRAHLEW
TPAKLIAWGERIGVGCAALVRWQMDNRPHPGQGYRCCLGLQRLARQHGHERLEAACTRAMAIHSPIYRSVNSILASGTDR
QPLPAQSTQTSLPLHENVRGPDYYH

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG4584

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017895
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 56448; Mature: 56448

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQIRQVLRLHLDAGLPYAKVARALGLPKSAVGKFALLARAAGVDWAVAQTLTDQELEAR
CHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LYRSAVPRAAHHLEPDYALIHQELKRPGVTLQLLWKEYAQANALAYKYTSFCIKYRAWAL
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLKRSMRQTHIAGDKLFVDYDGDTVPIVDAATGEIRQAQIFVAALGASSYTYACATMTQT
HHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCHHHHEEEEEEECCCCCEEEEHHHHCC
APDWVASIMNALEFIGGVPRLVVPDQPRAVVARPDRYEPGLGRLVEEFCDHYSVAMLPAR
CHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCCEEEEECCC
PARPKDKPKVEVAVQIVQRWILARLRNRRFFSLGELNCALADLLADLNQRPFKKLPGCRR
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCCHHHHCCCHHH
EAFEKLDKPALRALPPARMPIVRFKSARVNIDYHVDLGGHYYSVPHRLVRTTVELRIAGA
HHHHHHCCCHHHHCCCCCCCCEEEECEEEEEEEEEECCCEEEHHHHHHHHHHHEEEEECC
TLEIFAGQQRVAVHPVSTAKGKHSTISEHMPASHRAHLEWTPAKLIAWGERIGVGCAALV
EEEEECCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCEEECHHHHHHHHHHHCHHHHHHH
RWQMDNRPHPGQGYRCCLGLQRLARQHGHERLEAACTRAMAIHSPIYRSVNSILASGTDR
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QPLPAQSTQTSLPLHENVRGPDYYH
CCCCCCCCCCCCCHHCCCCCCCCCC
>Mature Secondary Structure
MRQIRQVLRLHLDAGLPYAKVARALGLPKSAVGKFALLARAAGVDWAVAQTLTDQELEAR
CHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LYRSAVPRAAHHLEPDYALIHQELKRPGVTLQLLWKEYAQANALAYKYTSFCIKYRAWAL
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLKRSMRQTHIAGDKLFVDYDGDTVPIVDAATGEIRQAQIFVAALGASSYTYACATMTQT
HHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCHHHHEEEEEEECCCCCEEEEHHHHCC
APDWVASIMNALEFIGGVPRLVVPDQPRAVVARPDRYEPGLGRLVEEFCDHYSVAMLPAR
CHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCCCHHHHHHHHHCCCEEEEECCC
PARPKDKPKVEVAVQIVQRWILARLRNRRFFSLGELNCALADLLADLNQRPFKKLPGCRR
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCCCHHHHCCCHHH
EAFEKLDKPALRALPPARMPIVRFKSARVNIDYHVDLGGHYYSVPHRLVRTTVELRIAGA
HHHHHHCCCHHHHCCCCCCCCEEEECEEEEEEEEEECCCEEEHHHHHHHHHHHEEEEECC
TLEIFAGQQRVAVHPVSTAKGKHSTISEHMPASHRAHLEWTPAKLIAWGERIGVGCAALV
EEEEECCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCEEECHHHHHHHHHHHCHHHHHHH
RWQMDNRPHPGQGYRCCLGLQRLARQHGHERLEAACTRAMAIHSPIYRSVNSILASGTDR
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QPLPAQSTQTSLPLHENVRGPDYYH
CCCCCCCCCCCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7518087 [H]