Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121611572

Identifier: 121611572

GI number: 121611572

Start: 5155048

End: 5156190

Strand: Direct

Name: 121611572

Synonym: Veis_4664

Alternate gene names: NA

Gene position: 5155048-5156190 (Clockwise)

Preceding gene: 121611571

Following gene: 121611573

Centisome position: 92.6

GC content: 60.98

Gene sequence:

>1143_bases
ATGCTGAACCTGAGCCCGCTTTTCTTTACCACCGTCGATGACGAATCCTGCATGCATGACGAGCTGGATCTGTCGCCCGG
GCAACGAGCCTGGATCGCCAGCGCCCGAAATGATGTCAGGAACTGCCTTCGCACCGGAATTCCGCGCGTGCTGCGCGAAC
GTGGGTACACGGAAGACGTGCCGCAGCCGCGCTTCTTCACGCAAGGATCGTGGGCGTACAAGACCTTGAATGGCCCGGCA
CAACGGCCCCAGCAGGCGGATGTCGATGATGGTTGCTATCTGCCGTTGAGTTTTGTCTCGCAGACGAAGCGTCCCAGCCG
CGCAACAACGGTGTTCTTTGCCGCTGCAGAAGAAGCGTTGAAGCCGCTGGTCGAGGAAAAGCGCTGGAAGCTCGTCACCG
ACAAGCCGACCTGCATCCGGATCGTCATTACAGCGTATGCCCACATCGACATTCCGCTGTACGCCATTCCCGACGAAGAA
TTCGTCACGCTCGCGAAAGCCTCGATGGAGCGATACGGCTATGACTCGCTGACGGAGGCGGTGAATATGGCAGAGCGGGA
TGCCTGGACGGCATTGCCCGCTGACAAAGTTCTGCTGGCGCATCGTGAATGCAACTGGATGTCTTCGGACCCCAGGCCCG
TGAAGGAATGGTTTCTGGGCGAGGTGGAAGCCAAGGGCGAACAGTTCCGCCGCGTGATTCGCTACTTGAAGGCGTTCCGT
GATTGGCGGTGGTCCAGCGGCGGGCCGGCTTCGATTCTGTTAATGGCCGCTGCGGCTCCGCTGTTCGAGAAGCGGGATCG
GCGCGACGACCTGGCATTGTTGGCTGTTGTCGCGGCATTGCCGGCCCGGCTGCGTGCGGGGGTGAACAACCCAGTGGATG
AGTCGGAGTCACTCACTGTACGCCTTGGCAAAGAGGGCGTCGAAGAGGCTGCGAAAGCGTTCGAAGCATTGGAAAAGGTG
CTGCGCGGTGCCACCGACGCCGGCAGTCCTTCACAGGCCTGCATCTGGATGCAAGGCGAGTTCGGTCCACGTTTTCCGAA
CGAGCCGGACCGGGTCAAGGTGGTATCCGTTGCCGCCACCATTGCCGCAGCGCCGGCCACAGATGGTCCGAGTGAATTGG
TCGGGCGAACGAAAGCCGGATGA

Upstream 100 bases:

>100_bases
AGCGCGCGCTTGGCGACCCGCTTTTCCAACCGTTTCGAGCGCACAAGGCCGGCGCACCCACCTTCTATCACGGCCCTAAC
AAGAATGTGTCGGAGGCCAC

Downstream 100 bases:

>100_bases
GCAGCGTCGCCGCAGTCGCGGACGTGATCGAAGCCTTCAAGCAGCAAGGCTTCGAGTTTGTCGGTAAGACGGACGACGGT
TGGTTCAAGCTGCGGGGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MLNLSPLFFTTVDDESCMHDELDLSPGQRAWIASARNDVRNCLRTGIPRVLRERGYTEDVPQPRFFTQGSWAYKTLNGPA
QRPQQADVDDGCYLPLSFVSQTKRPSRATTVFFAAAEEALKPLVEEKRWKLVTDKPTCIRIVITAYAHIDIPLYAIPDEE
FVTLAKASMERYGYDSLTEAVNMAERDAWTALPADKVLLAHRECNWMSSDPRPVKEWFLGEVEAKGEQFRRVIRYLKAFR
DWRWSSGGPASILLMAAAAPLFEKRDRRDDLALLAVVAALPARLRAGVNNPVDESESLTVRLGKEGVEEAAKAFEALEKV
LRGATDAGSPSQACIWMQGEFGPRFPNEPDRVKVVSVAATIAAAPATDGPSELVGRTKAG

Sequences:

>Translated_380_residues
MLNLSPLFFTTVDDESCMHDELDLSPGQRAWIASARNDVRNCLRTGIPRVLRERGYTEDVPQPRFFTQGSWAYKTLNGPA
QRPQQADVDDGCYLPLSFVSQTKRPSRATTVFFAAAEEALKPLVEEKRWKLVTDKPTCIRIVITAYAHIDIPLYAIPDEE
FVTLAKASMERYGYDSLTEAVNMAERDAWTALPADKVLLAHRECNWMSSDPRPVKEWFLGEVEAKGEQFRRVIRYLKAFR
DWRWSSGGPASILLMAAAAPLFEKRDRRDDLALLAVVAALPARLRAGVNNPVDESESLTVRLGKEGVEEAAKAFEALEKV
LRGATDAGSPSQACIWMQGEFGPRFPNEPDRVKVVSVAATIAAAPATDGPSELVGRTKAG
>Mature_380_residues
MLNLSPLFFTTVDDESCMHDELDLSPGQRAWIASARNDVRNCLRTGIPRVLRERGYTEDVPQPRFFTQGSWAYKTLNGPA
QRPQQADVDDGCYLPLSFVSQTKRPSRATTVFFAAAEEALKPLVEEKRWKLVTDKPTCIRIVITAYAHIDIPLYAIPDEE
FVTLAKASMERYGYDSLTEAVNMAERDAWTALPADKVLLAHRECNWMSSDPRPVKEWFLGEVEAKGEQFRRVIRYLKAFR
DWRWSSGGPASILLMAAAAPLFEKRDRRDDLALLAVVAALPARLRAGVNNPVDESESLTVRLGKEGVEEAAKAFEALEKV
LRGATDAGSPSQACIWMQGEFGPRFPNEPDRVKVVSVAATIAAAPATDGPSELVGRTKAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42185; Mature: 42185

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLSPLFFTTVDDESCMHDELDLSPGQRAWIASARNDVRNCLRTGIPRVLRERGYTEDV
CCCCCCEEEEECCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCC
PQPRFFTQGSWAYKTLNGPAQRPQQADVDDGCYLPLSFVSQTKRPSRATTVFFAAAEEAL
CCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHEEEHHHHHHHH
KPLVEEKRWKLVTDKPTCIRIVITAYAHIDIPLYAIPDEEFVTLAKASMERYGYDSLTEA
HHHHHHHCCEEECCCCCEEEEEEEEHHEECEEEEECCCHHHHHHHHHHHHHCCHHHHHHH
VNMAERDAWTALPADKVLLAHRECNWMSSDPRPVKEWFLGEVEAKGEQFRRVIRYLKAFR
HHHHHHHHHHCCCHHHHHEEHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
DWRWSSGGPASILLMAAAAPLFEKRDRRDDLALLAVVAALPARLRAGVNNPVDESESLTV
CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
RLGKEGVEEAAKAFEALEKVLRGATDAGSPSQACIWMQGEFGPRFPNEPDRVKVVSVAAT
EECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEHHHH
IAAAPATDGPSELVGRTKAG
HHHCCCCCCHHHHHCCCCCC
>Mature Secondary Structure
MLNLSPLFFTTVDDESCMHDELDLSPGQRAWIASARNDVRNCLRTGIPRVLRERGYTEDV
CCCCCCEEEEECCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCC
PQPRFFTQGSWAYKTLNGPAQRPQQADVDDGCYLPLSFVSQTKRPSRATTVFFAAAEEAL
CCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHEEEHHHHHHHH
KPLVEEKRWKLVTDKPTCIRIVITAYAHIDIPLYAIPDEEFVTLAKASMERYGYDSLTEA
HHHHHHHCCEEECCCCCEEEEEEEEHHEECEEEEECCCHHHHHHHHHHHHHCCHHHHHHH
VNMAERDAWTALPADKVLLAHRECNWMSSDPRPVKEWFLGEVEAKGEQFRRVIRYLKAFR
HHHHHHHHHHCCCHHHHHEEHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
DWRWSSGGPASILLMAAAAPLFEKRDRRDDLALLAVVAALPARLRAGVNNPVDESESLTV
CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
RLGKEGVEEAAKAFEALEKVLRGATDAGSPSQACIWMQGEFGPRFPNEPDRVKVVSVAAT
EECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEHHHH
IAAAPATDGPSELVGRTKAG
HHHCCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA