Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121611456

Identifier: 121611456

GI number: 121611456

Start: 5030028

End: 5031299

Strand: Direct

Name: 121611456

Synonym: Veis_4547

Alternate gene names: NA

Gene position: 5030028-5031299 (Clockwise)

Preceding gene: 121611441

Following gene: 121611457

Centisome position: 90.36

GC content: 58.41

Gene sequence:

>1272_bases
TTGACATCACGCCGCCGCATAATGACCGCCACGGTCCTTGCCCTCACCACCGCACTGGGCCTCTCTGCCTGTTCACAGGG
TGGCGCAGGCTCGCTCACCTTCATGGTCTTCGAGACTCCCGCACTGGACGCCAAATTTTGGGATACCTCCATCGCCACCG
CCGCAAAAGAGGTGTCCGGTGCCGCCATCAAAAAGATCGTGTCTCCCGATGCCGACCGCACCAAGTATGCAAAACAGTTG
CAGGCCAGCGGCCAATTTCCAGACATTCTGGCCTCCATCAGTCCGAAAGATTTCGCCGGTGCAAAGTTGCTGAAGCCGTT
CGATCAGAAGTGGCTCGATGACAACTTCCTTCAACCCACGGCCAATGCGATCGGTGGCGAAACATACATTCCGCCGACCA
ACTCGCAAATCATTCCGCTCGTCTTCTACAACAAGAAGATCTTTGCGGACAACGGCATCAGCGTTCCCACCACCTGGGCG
GCCTTTACGGCGGCGATCACCAAACTTCGCGCTGCGGGTATCACCCCACTGGAACTTGCGGGATCGGAAACATGGGCAGC
GAGCATGCCGCTGGTCGGACTGGCAAGTGCCGACGTGCTCGGCAAAGACCCCGCCTGGATCCAAAAGCTCTACAAGGGGG
AGGCAAAACTCTCGGATCCAATCTTCGCCAACGCGATGCAGAAGGCGGTGGATCTCGTCAAGATGGGCGCCTACAGCCCG
GCCGCGCTGAGCGTTGACTTCAAGACCGCAAACAGCAACTTTCTCGCTGGCAAGAGTGCGATGTATCCGATGGGAAGCTG
GTTCACCGGATCGAGTTATGTCAGCGCCGCGCAAGCAGACAATATCGGAGTCTTCCCCTGGCCGACGGACGACGGCTCGG
TCGTCATTCCGTTCAACGTGGGTGGCACCACCTCGGTCAGCGCGGCCTCCAAGAACGTGGACGCAGCGCAGAAATTTGCC
CAGGCATGGTCGCTCGCACCCGCCAATCTCAAGGTGCTCATCGAGACCGACGGAGCCTTCCCGATGATGAAAAAGCTCGG
CATCAAAGACTTTGGCGCCACGGTAAACGGCCTGTACAACAGCTCGTACTCCTACGTGACCGACAGCAATACCAAGGTGT
CCTCCTTCGGGTGGGTCAACAACGACGACGCACTCGCACCGGGGATCAACGACTCCTTCTACGCGCTGGCACAGTCGGTG
TTCTCTGACTCCGACGTCAAAAAACAGCTGACGAAACTGGACGCGGACTGGGCCGCTGCGACAAAGAAATAA

Upstream 100 bases:

>100_bases
ACCTACTTAGCATCAATCGAGTCCAATAAATGGATAAAACACAGCAATCGAGCACGGACTACTGGTCCGTCCAACGCCAT
CCAACATCGAGGAGACTGCT

Downstream 100 bases:

>100_bases
GCACGCAGCGCGCCGTGAGGGTGTGGGGAATCCTGCTGATTCCCCGCGCCCTCACGCAGTTACTTGCAAAACCGCAGAAG
GTACCGACAAGTGTCTACCC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: Sugar ABC Transporter; Transcriptional Regulator; MalE-Type ABC Sugar Transport System Periplasmic Component; Sugar ABC Transporter Periplasmic Component-Like Protein; ABC Transporter

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MTSRRRIMTATVLALTTALGLSACSQGGAGSLTFMVFETPALDAKFWDTSIATAAKEVSGAAIKKIVSPDADRTKYAKQL
QASGQFPDILASISPKDFAGAKLLKPFDQKWLDDNFLQPTANAIGGETYIPPTNSQIIPLVFYNKKIFADNGISVPTTWA
AFTAAITKLRAAGITPLELAGSETWAASMPLVGLASADVLGKDPAWIQKLYKGEAKLSDPIFANAMQKAVDLVKMGAYSP
AALSVDFKTANSNFLAGKSAMYPMGSWFTGSSYVSAAQADNIGVFPWPTDDGSVVIPFNVGGTTSVSAASKNVDAAQKFA
QAWSLAPANLKVLIETDGAFPMMKKLGIKDFGATVNGLYNSSYSYVTDSNTKVSSFGWVNNDDALAPGINDSFYALAQSV
FSDSDVKKQLTKLDADWAAATKK

Sequences:

>Translated_423_residues
MTSRRRIMTATVLALTTALGLSACSQGGAGSLTFMVFETPALDAKFWDTSIATAAKEVSGAAIKKIVSPDADRTKYAKQL
QASGQFPDILASISPKDFAGAKLLKPFDQKWLDDNFLQPTANAIGGETYIPPTNSQIIPLVFYNKKIFADNGISVPTTWA
AFTAAITKLRAAGITPLELAGSETWAASMPLVGLASADVLGKDPAWIQKLYKGEAKLSDPIFANAMQKAVDLVKMGAYSP
AALSVDFKTANSNFLAGKSAMYPMGSWFTGSSYVSAAQADNIGVFPWPTDDGSVVIPFNVGGTTSVSAASKNVDAAQKFA
QAWSLAPANLKVLIETDGAFPMMKKLGIKDFGATVNGLYNSSYSYVTDSNTKVSSFGWVNNDDALAPGINDSFYALAQSV
FSDSDVKKQLTKLDADWAAATKK
>Mature_422_residues
TSRRRIMTATVLALTTALGLSACSQGGAGSLTFMVFETPALDAKFWDTSIATAAKEVSGAAIKKIVSPDADRTKYAKQLQ
ASGQFPDILASISPKDFAGAKLLKPFDQKWLDDNFLQPTANAIGGETYIPPTNSQIIPLVFYNKKIFADNGISVPTTWAA
FTAAITKLRAAGITPLELAGSETWAASMPLVGLASADVLGKDPAWIQKLYKGEAKLSDPIFANAMQKAVDLVKMGAYSPA
ALSVDFKTANSNFLAGKSAMYPMGSWFTGSSYVSAAQADNIGVFPWPTDDGSVVIPFNVGGTTSVSAASKNVDAAQKFAQ
AWSLAPANLKVLIETDGAFPMMKKLGIKDFGATVNGLYNSSYSYVTDSNTKVSSFGWVNNDDALAPGINDSFYALAQSVF
SDSDVKKQLTKLDADWAAATKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44786; Mature: 44655

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRRRIMTATVLALTTALGLSACSQGGAGSLTFMVFETPALDAKFWDTSIATAAKEVSG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHCCHHHHHHHHHHHH
AAIKKIVSPDADRTKYAKQLQASGQFPDILASISPKDFAGAKLLKPFDQKWLDDNFLQPT
HHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHCHHHHHHCCCCCCCCH
ANAIGGETYIPPTNSQIIPLVFYNKKIFADNGISVPTTWAAFTAAITKLRAAGITPLELA
HHHCCCCEECCCCCCCEEEEEEECCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEC
GSETWAASMPLVGLASADVLGKDPAWIQKLYKGEAKLSDPIFANAMQKAVDLVKMGAYSP
CCCCHHCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
AALSVDFKTANSNFLAGKSAMYPMGSWFTGSSYVSAAQADNIGVFPWPTDDGSVVIPFNV
CEEEEEEEECCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
GGTTSVSAASKNVDAAQKFAQAWSLAPANLKVLIETDGAFPMMKKLGIKDFGATVNGLYN
CCCCCCCHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHCCCCHHCCHHHHHCC
SSYSYVTDSNTKVSSFGWVNNDDALAPGINDSFYALAQSVFSDSDVKKQLTKLDADWAAA
CCCCEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHC
TKK
CCC
>Mature Secondary Structure 
TSRRRIMTATVLALTTALGLSACSQGGAGSLTFMVFETPALDAKFWDTSIATAAKEVSG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHCCHHHHHHHHHHHH
AAIKKIVSPDADRTKYAKQLQASGQFPDILASISPKDFAGAKLLKPFDQKWLDDNFLQPT
HHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHCHHHHHHCCCCCCCCH
ANAIGGETYIPPTNSQIIPLVFYNKKIFADNGISVPTTWAAFTAAITKLRAAGITPLELA
HHHCCCCEECCCCCCCEEEEEEECCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEC
GSETWAASMPLVGLASADVLGKDPAWIQKLYKGEAKLSDPIFANAMQKAVDLVKMGAYSP
CCCCHHCCCCEEEECCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
AALSVDFKTANSNFLAGKSAMYPMGSWFTGSSYVSAAQADNIGVFPWPTDDGSVVIPFNV
CEEEEEEEECCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
GGTTSVSAASKNVDAAQKFAQAWSLAPANLKVLIETDGAFPMMKKLGIKDFGATVNGLYN
CCCCCCCHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHCCCCHHCCHHHHHCC
SSYSYVTDSNTKVSSFGWVNNDDALAPGINDSFYALAQSVFSDSDVKKQLTKLDADWAAA
CCCCEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHC
TKK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA