| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611432
Identifier: 121611432
GI number: 121611432
Start: 5003838
End: 5005169
Strand: Direct
Name: 121611432
Synonym: Veis_4522
Alternate gene names: NA
Gene position: 5003838-5005169 (Clockwise)
Preceding gene: 121611431
Following gene: 121611433
Centisome position: 89.89
GC content: 67.49
Gene sequence:
>1332_bases ATGAACCGATCTCCCTCCTTGGCCGCCATCAGCGAACCGCCGCGACAGACGCCCGTGCGCCACCTGGTGGACGTGCTGGT GGTCGGTGGCGGCAGCGCCGGCCTGATGGCCGCCGTGGCCGCAGCGCGCCAGGGCGCGCGCGTATTGTTGGTCGAGCGTA ACGGCTATCTGGGCGGCACGCTGTCCATGGTCACCCTGGGCAGCTTCTGCGGCCTGTATACCGTAACCGAAACCGAAGTG ATCCCGGTGGTTGGCGGCATGGCGGCTGAGTTCACAGAGCGCTTGGCGCATTGGGGCGGGCCGCGCGAGCCGTTGCGCTG GCTGCAAACCGCCTCGCTCCCATACGACCCGACGCTGGTCAAACTGGCCGCCGATGAGCTCGTGCTGCAAGCCGGCGTGC AACTCGCCTTTCACTGCCTGGCCGTTGGTGTGCTGCGGGAGGATCAACATGTGCGTGGCGCCATCTTTGAAGGTCGCGAT GGCCGCTGGGCCTGCGCAGCGCATGTCGTGATCGACTGCACGGGCGATGGCGACATCGCCGCCCTGGCCGGGGCCGATTT CGAGCACGACCCGCAGGTCATCCAGGCACCCACAACCATGTTTCGCTTGGGCGGTGTGGACGTGGCGCGCGCCAGTGCGT TGAACCGCGACGAGCTGCGGCGCCACCTCGAGCAGGCCGTGGCCTGCGGCCTCAATCTGCCACGCACCAGCGGCGGCGCT TTCAGCGTCCGGCCCGCCAGCATGCACCTGAATATCACCCGAGTCGTCAAAGACGGTCGCGCGCCTGACCCTCTGGACAC GCAGGAGTTGACCGATTCGGAAGTGCAGGGCCGACGACAGATCAGCGCCTACCTGAAAGCTTTTCGCCGCTTCGTTCCCG GCTATGAGAACTGCTTCATCGAGGACATTGGCGCACAAATCGGTGTGCGCGAAAGCCGCCGCGTGCGCGGCGACTATTGG CTCACGCAGCACGACGTGCTCAACCAAGGCCGCTTTCGCGACGCGGTGGCGTGCAGCGCATGGCCCATGGAGGAGCATGG CGTGGGCCGCGCCACGCTCTGGCGCTTTCTCGCACCAGGCACCTATTACCAACTGCCTTACCGAATGATGCTGCCCGCCG GCCTTCATGGCTTGCTCGTGGCGGGGCGCTGCGCCTCGGCCTCGCATGAGGCCCACGCATCGATGCGGGTCGCCGCCGTG TGCATGGCGCTGGGTGAAGCCGCCGGCGTGGCCGCCGCGCAGGCGGTTGCGGCGGGTGTCATGCCGCGTGACATCGACAC CGATGCGTTGCGCCGGACATTGCGCGCACAAGGCGCGATCCTGGGCGACTGA
Upstream 100 bases:
>100_bases GAGAGCGCAATCTGCCACGGCGCGGCGAGACCGTGCTGTTGCGGGCCGATACGCAACATGTCCATCTGTTCCATGCCGAC ACTGGCGCGGTGGTGCAGGC
Downstream 100 bases:
>100_bases GTTCCCTCACTTCGATACCCGAATCCGATGAGAAACTACCGTTCCAACTTCGAGCCAGGCACCACCCGGTGGGCCATTCG CCGTGCCCAATGGCGCGCGC
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: Invasion Protein IbeA; Glucose-Inhibited Division Protein A; Fumarate Reductase/Succinate Dehydrogenase Flavoprotein; Dihydrolipoamide Dehydrogenase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Invasion Protein IbeA Family Protein; Protein Involved In Invasion; FAD Dependent Oxidoreductase Domain Protein; Invasion Protein; Pyridine Nucleotide-Disulfide Oxidoreductase Family; tRNA Uridine 5-Carboxymethylaminomethyl GidA; Pyridine Nucleotide-Disulfide Oxidoreductase
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MNRSPSLAAISEPPRQTPVRHLVDVLVVGGGSAGLMAAVAAARQGARVLLVERNGYLGGTLSMVTLGSFCGLYTVTETEV IPVVGGMAAEFTERLAHWGGPREPLRWLQTASLPYDPTLVKLAADELVLQAGVQLAFHCLAVGVLREDQHVRGAIFEGRD GRWACAAHVVIDCTGDGDIAALAGADFEHDPQVIQAPTTMFRLGGVDVARASALNRDELRRHLEQAVACGLNLPRTSGGA FSVRPASMHLNITRVVKDGRAPDPLDTQELTDSEVQGRRQISAYLKAFRRFVPGYENCFIEDIGAQIGVRESRRVRGDYW LTQHDVLNQGRFRDAVACSAWPMEEHGVGRATLWRFLAPGTYYQLPYRMMLPAGLHGLLVAGRCASASHEAHASMRVAAV CMALGEAAGVAAAQAVAAGVMPRDIDTDALRRTLRAQGAILGD
Sequences:
>Translated_443_residues MNRSPSLAAISEPPRQTPVRHLVDVLVVGGGSAGLMAAVAAARQGARVLLVERNGYLGGTLSMVTLGSFCGLYTVTETEV IPVVGGMAAEFTERLAHWGGPREPLRWLQTASLPYDPTLVKLAADELVLQAGVQLAFHCLAVGVLREDQHVRGAIFEGRD GRWACAAHVVIDCTGDGDIAALAGADFEHDPQVIQAPTTMFRLGGVDVARASALNRDELRRHLEQAVACGLNLPRTSGGA FSVRPASMHLNITRVVKDGRAPDPLDTQELTDSEVQGRRQISAYLKAFRRFVPGYENCFIEDIGAQIGVRESRRVRGDYW LTQHDVLNQGRFRDAVACSAWPMEEHGVGRATLWRFLAPGTYYQLPYRMMLPAGLHGLLVAGRCASASHEAHASMRVAAV CMALGEAAGVAAAQAVAAGVMPRDIDTDALRRTLRAQGAILGD >Mature_443_residues MNRSPSLAAISEPPRQTPVRHLVDVLVVGGGSAGLMAAVAAARQGARVLLVERNGYLGGTLSMVTLGSFCGLYTVTETEV IPVVGGMAAEFTERLAHWGGPREPLRWLQTASLPYDPTLVKLAADELVLQAGVQLAFHCLAVGVLREDQHVRGAIFEGRD GRWACAAHVVIDCTGDGDIAALAGADFEHDPQVIQAPTTMFRLGGVDVARASALNRDELRRHLEQAVACGLNLPRTSGGA FSVRPASMHLNITRVVKDGRAPDPLDTQELTDSEVQGRRQISAYLKAFRRFVPGYENCFIEDIGAQIGVRESRRVRGDYW LTQHDVLNQGRFRDAVACSAWPMEEHGVGRATLWRFLAPGTYYQLPYRMMLPAGLHGLLVAGRCASASHEAHASMRVAAV CMALGEAAGVAAAQAVAAGVMPRDIDTDALRRTLRAQGAILGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47555; Mature: 47555
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRSPSLAAISEPPRQTPVRHLVDVLVVGGGSAGLMAAVAAARQGARVLLVERNGYLGGT CCCCCCCEECCCCCCCCHHHHHHHEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCH LSMVTLGSFCGLYTVTETEVIPVVGGMAAEFTERLAHWGGPREPLRWLQTASLPYDPTLV HHHHHHHHHHCEEEECCCEEEEHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHH KLAADELVLQAGVQLAFHCLAVGVLREDQHVRGAIFEGRDGRWACAAHVVIDCTGDGDIA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEEEEEECCCCCEE ALAGADFEHDPQVIQAPTTMFRLGGVDVARASALNRDELRRHLEQAVACGLNLPRTSGGA EEECCCCCCCCCEEECCHHHHEECCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCE FSVRPASMHLNITRVVKDGRAPDPLDTQELTDSEVQGRRQISAYLKAFRRFVPGYENCFI EEEECCCEEEEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH EDIGAQIGVRESRRVRGDYWLTQHDVLNQGRFRDAVACSAWPMEEHGVGRATLWRFLAPG HHHCCCCCCCHHHCCCCCEEEEHHHHHCCCCCCHHHEECCCCCHHCCCCHHHHHHHHCCC TYYQLPYRMMLPAGLHGLLVAGRCASASHEAHASMRVAAVCMALGEAAGVAAAQAVAAGV CEEECCHHHCCCCCCHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MPRDIDTDALRRTLRAQGAILGD CCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNRSPSLAAISEPPRQTPVRHLVDVLVVGGGSAGLMAAVAAARQGARVLLVERNGYLGGT CCCCCCCEECCCCCCCCHHHHHHHEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCH LSMVTLGSFCGLYTVTETEVIPVVGGMAAEFTERLAHWGGPREPLRWLQTASLPYDPTLV HHHHHHHHHHCEEEECCCEEEEHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHH KLAADELVLQAGVQLAFHCLAVGVLREDQHVRGAIFEGRDGRWACAAHVVIDCTGDGDIA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEEEEEECCCCCEE ALAGADFEHDPQVIQAPTTMFRLGGVDVARASALNRDELRRHLEQAVACGLNLPRTSGGA EEECCCCCCCCCEEECCHHHHEECCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCE FSVRPASMHLNITRVVKDGRAPDPLDTQELTDSEVQGRRQISAYLKAFRRFVPGYENCFI EEEECCCEEEEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH EDIGAQIGVRESRRVRGDYWLTQHDVLNQGRFRDAVACSAWPMEEHGVGRATLWRFLAPG HHHCCCCCCCHHHCCCCCEEEEHHHHHCCCCCCHHHEECCCCCHHCCCCHHHHHHHHCCC TYYQLPYRMMLPAGLHGLLVAGRCASASHEAHASMRVAAVCMALGEAAGVAAAQAVAAGV CEEECCHHHCCCCCCHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC MPRDIDTDALRRTLRAQGAILGD CCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA