Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121611432

Identifier: 121611432

GI number: 121611432

Start: 5003838

End: 5005169

Strand: Direct

Name: 121611432

Synonym: Veis_4522

Alternate gene names: NA

Gene position: 5003838-5005169 (Clockwise)

Preceding gene: 121611431

Following gene: 121611433

Centisome position: 89.89

GC content: 67.49

Gene sequence:

>1332_bases
ATGAACCGATCTCCCTCCTTGGCCGCCATCAGCGAACCGCCGCGACAGACGCCCGTGCGCCACCTGGTGGACGTGCTGGT
GGTCGGTGGCGGCAGCGCCGGCCTGATGGCCGCCGTGGCCGCAGCGCGCCAGGGCGCGCGCGTATTGTTGGTCGAGCGTA
ACGGCTATCTGGGCGGCACGCTGTCCATGGTCACCCTGGGCAGCTTCTGCGGCCTGTATACCGTAACCGAAACCGAAGTG
ATCCCGGTGGTTGGCGGCATGGCGGCTGAGTTCACAGAGCGCTTGGCGCATTGGGGCGGGCCGCGCGAGCCGTTGCGCTG
GCTGCAAACCGCCTCGCTCCCATACGACCCGACGCTGGTCAAACTGGCCGCCGATGAGCTCGTGCTGCAAGCCGGCGTGC
AACTCGCCTTTCACTGCCTGGCCGTTGGTGTGCTGCGGGAGGATCAACATGTGCGTGGCGCCATCTTTGAAGGTCGCGAT
GGCCGCTGGGCCTGCGCAGCGCATGTCGTGATCGACTGCACGGGCGATGGCGACATCGCCGCCCTGGCCGGGGCCGATTT
CGAGCACGACCCGCAGGTCATCCAGGCACCCACAACCATGTTTCGCTTGGGCGGTGTGGACGTGGCGCGCGCCAGTGCGT
TGAACCGCGACGAGCTGCGGCGCCACCTCGAGCAGGCCGTGGCCTGCGGCCTCAATCTGCCACGCACCAGCGGCGGCGCT
TTCAGCGTCCGGCCCGCCAGCATGCACCTGAATATCACCCGAGTCGTCAAAGACGGTCGCGCGCCTGACCCTCTGGACAC
GCAGGAGTTGACCGATTCGGAAGTGCAGGGCCGACGACAGATCAGCGCCTACCTGAAAGCTTTTCGCCGCTTCGTTCCCG
GCTATGAGAACTGCTTCATCGAGGACATTGGCGCACAAATCGGTGTGCGCGAAAGCCGCCGCGTGCGCGGCGACTATTGG
CTCACGCAGCACGACGTGCTCAACCAAGGCCGCTTTCGCGACGCGGTGGCGTGCAGCGCATGGCCCATGGAGGAGCATGG
CGTGGGCCGCGCCACGCTCTGGCGCTTTCTCGCACCAGGCACCTATTACCAACTGCCTTACCGAATGATGCTGCCCGCCG
GCCTTCATGGCTTGCTCGTGGCGGGGCGCTGCGCCTCGGCCTCGCATGAGGCCCACGCATCGATGCGGGTCGCCGCCGTG
TGCATGGCGCTGGGTGAAGCCGCCGGCGTGGCCGCCGCGCAGGCGGTTGCGGCGGGTGTCATGCCGCGTGACATCGACAC
CGATGCGTTGCGCCGGACATTGCGCGCACAAGGCGCGATCCTGGGCGACTGA

Upstream 100 bases:

>100_bases
GAGAGCGCAATCTGCCACGGCGCGGCGAGACCGTGCTGTTGCGGGCCGATACGCAACATGTCCATCTGTTCCATGCCGAC
ACTGGCGCGGTGGTGCAGGC

Downstream 100 bases:

>100_bases
GTTCCCTCACTTCGATACCCGAATCCGATGAGAAACTACCGTTCCAACTTCGAGCCAGGCACCACCCGGTGGGCCATTCG
CCGTGCCCAATGGCGCGCGC

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: Invasion Protein IbeA; Glucose-Inhibited Division Protein A; Fumarate Reductase/Succinate Dehydrogenase Flavoprotein; Dihydrolipoamide Dehydrogenase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Invasion Protein IbeA Family Protein; Protein Involved In Invasion; FAD Dependent Oxidoreductase Domain Protein; Invasion Protein; Pyridine Nucleotide-Disulfide Oxidoreductase Family; tRNA Uridine 5-Carboxymethylaminomethyl GidA; Pyridine Nucleotide-Disulfide Oxidoreductase

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MNRSPSLAAISEPPRQTPVRHLVDVLVVGGGSAGLMAAVAAARQGARVLLVERNGYLGGTLSMVTLGSFCGLYTVTETEV
IPVVGGMAAEFTERLAHWGGPREPLRWLQTASLPYDPTLVKLAADELVLQAGVQLAFHCLAVGVLREDQHVRGAIFEGRD
GRWACAAHVVIDCTGDGDIAALAGADFEHDPQVIQAPTTMFRLGGVDVARASALNRDELRRHLEQAVACGLNLPRTSGGA
FSVRPASMHLNITRVVKDGRAPDPLDTQELTDSEVQGRRQISAYLKAFRRFVPGYENCFIEDIGAQIGVRESRRVRGDYW
LTQHDVLNQGRFRDAVACSAWPMEEHGVGRATLWRFLAPGTYYQLPYRMMLPAGLHGLLVAGRCASASHEAHASMRVAAV
CMALGEAAGVAAAQAVAAGVMPRDIDTDALRRTLRAQGAILGD

Sequences:

>Translated_443_residues
MNRSPSLAAISEPPRQTPVRHLVDVLVVGGGSAGLMAAVAAARQGARVLLVERNGYLGGTLSMVTLGSFCGLYTVTETEV
IPVVGGMAAEFTERLAHWGGPREPLRWLQTASLPYDPTLVKLAADELVLQAGVQLAFHCLAVGVLREDQHVRGAIFEGRD
GRWACAAHVVIDCTGDGDIAALAGADFEHDPQVIQAPTTMFRLGGVDVARASALNRDELRRHLEQAVACGLNLPRTSGGA
FSVRPASMHLNITRVVKDGRAPDPLDTQELTDSEVQGRRQISAYLKAFRRFVPGYENCFIEDIGAQIGVRESRRVRGDYW
LTQHDVLNQGRFRDAVACSAWPMEEHGVGRATLWRFLAPGTYYQLPYRMMLPAGLHGLLVAGRCASASHEAHASMRVAAV
CMALGEAAGVAAAQAVAAGVMPRDIDTDALRRTLRAQGAILGD
>Mature_443_residues
MNRSPSLAAISEPPRQTPVRHLVDVLVVGGGSAGLMAAVAAARQGARVLLVERNGYLGGTLSMVTLGSFCGLYTVTETEV
IPVVGGMAAEFTERLAHWGGPREPLRWLQTASLPYDPTLVKLAADELVLQAGVQLAFHCLAVGVLREDQHVRGAIFEGRD
GRWACAAHVVIDCTGDGDIAALAGADFEHDPQVIQAPTTMFRLGGVDVARASALNRDELRRHLEQAVACGLNLPRTSGGA
FSVRPASMHLNITRVVKDGRAPDPLDTQELTDSEVQGRRQISAYLKAFRRFVPGYENCFIEDIGAQIGVRESRRVRGDYW
LTQHDVLNQGRFRDAVACSAWPMEEHGVGRATLWRFLAPGTYYQLPYRMMLPAGLHGLLVAGRCASASHEAHASMRVAAV
CMALGEAAGVAAAQAVAAGVMPRDIDTDALRRTLRAQGAILGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47555; Mature: 47555

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRSPSLAAISEPPRQTPVRHLVDVLVVGGGSAGLMAAVAAARQGARVLLVERNGYLGGT
CCCCCCCEECCCCCCCCHHHHHHHEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCH
LSMVTLGSFCGLYTVTETEVIPVVGGMAAEFTERLAHWGGPREPLRWLQTASLPYDPTLV
HHHHHHHHHHCEEEECCCEEEEHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHH
KLAADELVLQAGVQLAFHCLAVGVLREDQHVRGAIFEGRDGRWACAAHVVIDCTGDGDIA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEEEEEECCCCCEE
ALAGADFEHDPQVIQAPTTMFRLGGVDVARASALNRDELRRHLEQAVACGLNLPRTSGGA
EEECCCCCCCCCEEECCHHHHEECCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCE
FSVRPASMHLNITRVVKDGRAPDPLDTQELTDSEVQGRRQISAYLKAFRRFVPGYENCFI
EEEECCCEEEEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
EDIGAQIGVRESRRVRGDYWLTQHDVLNQGRFRDAVACSAWPMEEHGVGRATLWRFLAPG
HHHCCCCCCCHHHCCCCCEEEEHHHHHCCCCCCHHHEECCCCCHHCCCCHHHHHHHHCCC
TYYQLPYRMMLPAGLHGLLVAGRCASASHEAHASMRVAAVCMALGEAAGVAAAQAVAAGV
CEEECCHHHCCCCCCHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MPRDIDTDALRRTLRAQGAILGD
CCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNRSPSLAAISEPPRQTPVRHLVDVLVVGGGSAGLMAAVAAARQGARVLLVERNGYLGGT
CCCCCCCEECCCCCCCCHHHHHHHEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCH
LSMVTLGSFCGLYTVTETEVIPVVGGMAAEFTERLAHWGGPREPLRWLQTASLPYDPTLV
HHHHHHHHHHCEEEECCCEEEEHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHH
KLAADELVLQAGVQLAFHCLAVGVLREDQHVRGAIFEGRDGRWACAAHVVIDCTGDGDIA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEEEEEEECCCCCEE
ALAGADFEHDPQVIQAPTTMFRLGGVDVARASALNRDELRRHLEQAVACGLNLPRTSGGA
EEECCCCCCCCCEEECCHHHHEECCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCE
FSVRPASMHLNITRVVKDGRAPDPLDTQELTDSEVQGRRQISAYLKAFRRFVPGYENCFI
EEEECCCEEEEEEEEECCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
EDIGAQIGVRESRRVRGDYWLTQHDVLNQGRFRDAVACSAWPMEEHGVGRATLWRFLAPG
HHHCCCCCCCHHHCCCCCEEEEHHHHHCCCCCCHHHEECCCCCHHCCCCHHHHHHHHCCC
TYYQLPYRMMLPAGLHGLLVAGRCASASHEAHASMRVAAVCMALGEAAGVAAAQAVAAGV
CEEECCHHHCCCCCCHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MPRDIDTDALRRTLRAQGAILGD
CCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA