| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is fabG [H]
Identifier: 121611423
GI number: 121611423
Start: 4992873
End: 4993709
Strand: Direct
Name: fabG [H]
Synonym: Veis_4512
Alternate gene names: 121611423
Gene position: 4992873-4993709 (Clockwise)
Preceding gene: 121611422
Following gene: 121611424
Centisome position: 89.69
GC content: 67.62
Gene sequence:
>837_bases ATGAGTTCAAAGGGCATTGATTTTGGCCACGCGGGGCCCCTGCGCGAGGCCGATCCTGCGCGCAACTGCAAGCGCTTTTC CGGGCGTGCGGCGCTGCTCACGGCCGCAGCACGCGGCATCGGTCTGGCCTGCGCGCTGCGGCTGGCGGCCGAAGGCGCAA CGGTGTGTGTCACCGACCGCGACGAGGACGCGCTGGCCGAAGCCGCGGCGCTGGCGCAGCAGGCTGGACTGACGCTGCAC ACCAGCGTCATGGATTCGTCCGATGTGCTCGACACCGCGACCCGCATCGAGACCCTGCAGCAGTTGCTCGGCCCCTTCGA CATCCTGGTCAACAACGCCGGCGGTTCGCTGCACACGCCCTACCACTTCATGGACGAGACCGACGCGCACTGGCAGAGCG TGATCGAGCTCAACATGTTGAGCGCCGTGTGGAGTTGCCGCGCAGTGCTGCCGGGCATGGTCGCGCGCGGCGTCGGGCGC ATCGTCAACTTCGGCTCGAAGGCGGGCCGCTTCGGAAGCCTGATTGCCGGAGCCAACTACGCCGCCGTGAAGGGCGCGAT GGCCTCTTTGACGCGCCAGCTCGCGCTGGAATACGGCGCGTATGGCATCACGGTCAATTGCATCTGCCCCGGCATCGTGA TGACGGCGCGCACGCGCAGCCTGTGGAGCGAGCGTCGCACGCCTGCCGAGCGAGCGCGCGTGCTGGACGAGATTCCGCTC AAGCGGCATTGCGAAGTCGAAGATGTCGCGGCCAGCGTCGCGTTCCTGGCTTCGGACGATGCCGCTTTCATCACCGGCGC CACGCTCGATCTCAACGGCGGTCAGGCCATGGCGTGA
Upstream 100 bases:
>100_bases GGGGCTCGATGGATGATTTGAAGCAGCGCATCCACAGCGAAAGCGAACGCTGGGGCAAGGTCATCCGCTTGGCCAACATC ACCGCAGATTGAGGCCACCC
Downstream 100 bases:
>100_bases ACCCCGAACGGCCGCCCGAAGGTGCTCATGCCGCAGCCGAAGGCGGGGGTACTCCAGTGAGCCATTTCATTGGGGAGTGC CGACGACGCGGTGCCGGCGC
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSSKGIDFGHAGPLREADPARNCKRFSGRAALLTAAARGIGLACALRLAAEGATVCVTDRDEDALAEAAALAQQAGLTLH TSVMDSSDVLDTATRIETLQQLLGPFDILVNNAGGSLHTPYHFMDETDAHWQSVIELNMLSAVWSCRAVLPGMVARGVGR IVNFGSKAGRFGSLIAGANYAAVKGAMASLTRQLALEYGAYGITVNCICPGIVMTARTRSLWSERRTPAERARVLDEIPL KRHCEVEDVAASVAFLASDDAAFITGATLDLNGGQAMA
Sequences:
>Translated_278_residues MSSKGIDFGHAGPLREADPARNCKRFSGRAALLTAAARGIGLACALRLAAEGATVCVTDRDEDALAEAAALAQQAGLTLH TSVMDSSDVLDTATRIETLQQLLGPFDILVNNAGGSLHTPYHFMDETDAHWQSVIELNMLSAVWSCRAVLPGMVARGVGR IVNFGSKAGRFGSLIAGANYAAVKGAMASLTRQLALEYGAYGITVNCICPGIVMTARTRSLWSERRTPAERARVLDEIPL KRHCEVEDVAASVAFLASDDAAFITGATLDLNGGQAMA >Mature_277_residues SSKGIDFGHAGPLREADPARNCKRFSGRAALLTAAARGIGLACALRLAAEGATVCVTDRDEDALAEAAALAQQAGLTLHT SVMDSSDVLDTATRIETLQQLLGPFDILVNNAGGSLHTPYHFMDETDAHWQSVIELNMLSAVWSCRAVLPGMVARGVGRI VNFGSKAGRFGSLIAGANYAAVKGAMASLTRQLALEYGAYGITVNCICPGIVMTARTRSLWSERRTPAERARVLDEIPLK RHCEVEDVAASVAFLASDDAAFITGATLDLNGGQAMA
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=252, Percent_Identity=34.5238095238095, Blast_Score=130, Evalue=9e-31, Organism=Homo sapiens, GI7705925, Length=250, Percent_Identity=32.8, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI126723750, Length=274, Percent_Identity=30.6569343065693, Blast_Score=112, Evalue=5e-25, Organism=Homo sapiens, GI66933014, Length=254, Percent_Identity=32.6771653543307, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI15277342, Length=264, Percent_Identity=32.1969696969697, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI19923817, Length=265, Percent_Identity=27.9245283018868, Blast_Score=101, Evalue=8e-22, Organism=Homo sapiens, GI59889578, Length=232, Percent_Identity=34.051724137931, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI5031737, Length=259, Percent_Identity=29.3436293436293, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI40254992, Length=239, Percent_Identity=31.3807531380753, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI210032110, Length=212, Percent_Identity=30.6603773584906, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI142976729, Length=206, Percent_Identity=31.0679611650485, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI4503817, Length=231, Percent_Identity=29.4372294372294, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI126723191, Length=185, Percent_Identity=31.8918918918919, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI7705855, Length=209, Percent_Identity=30.622009569378, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI4503301, Length=276, Percent_Identity=26.4492753623188, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI40807363, Length=197, Percent_Identity=28.4263959390863, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI33667109, Length=192, Percent_Identity=30.2083333333333, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI7657478, Length=191, Percent_Identity=33.5078534031414, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI31542939, Length=210, Percent_Identity=29.5238095238095, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI20149619, Length=190, Percent_Identity=31.0526315789474, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI4504505, Length=192, Percent_Identity=28.6458333333333, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1787335, Length=252, Percent_Identity=37.6984126984127, Blast_Score=148, Evalue=5e-37, Organism=Escherichia coli, GI2367175, Length=252, Percent_Identity=36.1111111111111, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI87082100, Length=262, Percent_Identity=34.7328244274809, Blast_Score=118, Evalue=5e-28, Organism=Escherichia coli, GI1790717, Length=261, Percent_Identity=28.3524904214559, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1788459, Length=252, Percent_Identity=30.952380952381, Blast_Score=100, Evalue=7e-23, Organism=Escherichia coli, GI1787905, Length=250, Percent_Identity=31.6, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI87082160, Length=251, Percent_Identity=29.4820717131474, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1789208, Length=253, Percent_Identity=29.2490118577075, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI2367365, Length=255, Percent_Identity=32.156862745098, Blast_Score=84, Evalue=9e-18, Organism=Escherichia coli, GI1789057, Length=262, Percent_Identity=27.4809160305344, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786812, Length=257, Percent_Identity=28.7937743190661, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787820, Length=184, Percent_Identity=33.1521739130435, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1789378, Length=256, Percent_Identity=25.78125, Blast_Score=74, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17561402, Length=257, Percent_Identity=33.0739299610895, Blast_Score=133, Evalue=8e-32, Organism=Caenorhabditis elegans, GI17560676, Length=258, Percent_Identity=32.5581395348837, Blast_Score=127, Evalue=7e-30, Organism=Caenorhabditis elegans, GI115534694, Length=253, Percent_Identity=33.9920948616601, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI25147288, Length=254, Percent_Identity=31.8897637795276, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17538480, Length=269, Percent_Identity=29.7397769516729, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17562910, Length=272, Percent_Identity=28.6764705882353, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17551412, Length=267, Percent_Identity=29.5880149812734, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17560332, Length=269, Percent_Identity=29.368029739777, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17544670, Length=268, Percent_Identity=29.1044776119403, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17562904, Length=273, Percent_Identity=28.2051282051282, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17555706, Length=253, Percent_Identity=30.4347826086957, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71994600, Length=256, Percent_Identity=31.25, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17559104, Length=263, Percent_Identity=28.1368821292776, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI17562906, Length=263, Percent_Identity=27.7566539923954, Blast_Score=91, Evalue=9e-19, Organism=Caenorhabditis elegans, GI71994604, Length=262, Percent_Identity=30.5343511450382, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17560150, Length=269, Percent_Identity=27.5092936802974, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17562908, Length=270, Percent_Identity=28.8888888888889, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17560220, Length=267, Percent_Identity=26.9662921348315, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI193204405, Length=266, Percent_Identity=25.9398496240602, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17562990, Length=262, Percent_Identity=27.4809160305344, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17531453, Length=263, Percent_Identity=26.9961977186312, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI25152911, Length=223, Percent_Identity=31.390134529148, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI72000259, Length=264, Percent_Identity=25, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17565030, Length=271, Percent_Identity=28.0442804428044, Blast_Score=81, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17563726, Length=265, Percent_Identity=24.1509433962264, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17538486, Length=278, Percent_Identity=26.2589928057554, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17568967, Length=192, Percent_Identity=30.2083333333333, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17564282, Length=195, Percent_Identity=28.2051282051282, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17536651, Length=271, Percent_Identity=28.0442804428044, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71997099, Length=206, Percent_Identity=28.6407766990291, Blast_Score=68, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6322861, Length=206, Percent_Identity=30.5825242718447, Blast_Score=80, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6324126, Length=253, Percent_Identity=23.3201581027668, Blast_Score=72, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6323882, Length=261, Percent_Identity=29.8850574712644, Blast_Score=70, Evalue=3e-13, Organism=Drosophila melanogaster, GI21355319, Length=257, Percent_Identity=32.295719844358, Blast_Score=110, Evalue=9e-25, Organism=Drosophila melanogaster, GI24643142, Length=255, Percent_Identity=30.9803921568627, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24644339, Length=264, Percent_Identity=32.9545454545455, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI23397609, Length=255, Percent_Identity=32.5490196078431, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24639444, Length=253, Percent_Identity=30.4347826086957, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI21357041, Length=263, Percent_Identity=31.5589353612167, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI28571526, Length=272, Percent_Identity=30.1470588235294, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI24644337, Length=259, Percent_Identity=32.4324324324324, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24581726, Length=199, Percent_Identity=30.6532663316583, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI18859837, Length=201, Percent_Identity=30.8457711442786, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI21356301, Length=196, Percent_Identity=29.0816326530612, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI221510726, Length=193, Percent_Identity=27.4611398963731, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24640492, Length=202, Percent_Identity=27.7227722772277, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24649181, Length=200, Percent_Identity=29.5, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24648693, Length=204, Percent_Identity=30.8823529411765, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI21355889, Length=204, Percent_Identity=30.8823529411765, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 29263; Mature: 29131
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKGIDFGHAGPLREADPARNCKRFSGRAALLTAAARGIGLACALRLAAEGATVCVTDR CCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC DEDALAEAAALAQQAGLTLHTSVMDSSDVLDTATRIETLQQLLGPFDILVNNAGGSLHTP CHHHHHHHHHHHHHCCCEEEEHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC YHFMDETDAHWQSVIELNMLSAVWSCRAVLPGMVARGVGRIVNFGSKAGRFGSLIAGANY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCH AAVKGAMASLTRQLALEYGAYGITVNCICPGIVMTARTRSLWSERRTPAERARVLDEIPL HHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCC KRHCEVEDVAASVAFLASDDAAFITGATLDLNGGQAMA CCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCC >Mature Secondary Structure SSKGIDFGHAGPLREADPARNCKRFSGRAALLTAAARGIGLACALRLAAEGATVCVTDR CCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC DEDALAEAAALAQQAGLTLHTSVMDSSDVLDTATRIETLQQLLGPFDILVNNAGGSLHTP CHHHHHHHHHHHHHCCCEEEEHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC YHFMDETDAHWQSVIELNMLSAVWSCRAVLPGMVARGVGRIVNFGSKAGRFGSLIAGANY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCH AAVKGAMASLTRQLALEYGAYGITVNCICPGIVMTARTRSLWSERRTPAERARVLDEIPL HHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCC KRHCEVEDVAASVAFLASDDAAFITGATLDLNGGQAMA CCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1556094; 8905232; 9278503; 1314802 [H]