| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611305
Identifier: 121611305
GI number: 121611305
Start: 4838213
End: 4840009
Strand: Direct
Name: 121611305
Synonym: Veis_4391
Alternate gene names: NA
Gene position: 4838213-4840009 (Clockwise)
Preceding gene: 121611304
Following gene: 121611312
Centisome position: 86.91
GC content: 64.5
Gene sequence:
>1797_bases ATGATCGATCTGTCACCGACACAGCAAGTGAGCCACTGGCTCACAGCCTTTGAGCAGGCGCTGGCAAAAGGCGATGTCGC CCAAGCCGCCGCCATGTTCGACGCCGACAGCTACTGGCGCGATCTGGTCGCATTCACCTGGAACATCAAGACCTGCGAAG GCCAGGCCGCCATCGCCGACATGCTCGGCACCGTGCTCGCCGGCGTGCAGCCGTCGAACTGGCGCCTGGAGGGCGAAGCC AGCCAGGCCAATGGCCTGACCGAAGCCTGGTTCACTTTCGAGACCGCCACCGCCCGGGGCCTGGGCCAGTTGCGGCTCAA GGGCGACAAATGCTGGACCCTGCTGACCACCATGGCCGAGCTCAAAGACTTCCCGGAGCGCAAAGGGCCGGCGCGGGCGC TGGGCACCGTCCATGGCGTCGTGCGCGGGCGCAAAAACTGGCTCGACCACAAAACCGAGGAAGAAGCCACCCTGGGCTAC AGCCGGCAGCCCTACTGCCTGATCATCGGCGGCGGCCAATGCGGCATTGCGCTGGCCGCCCGGTTGCGCCGCCTCGATGT CCCGACCATCGTCATCGAAAGGCAGGCCCGCGCCGGCGATTCCTGGCGCAACCGCTACAAGTCGCTGTGCCTGCATGACC CGGTCTGGTACGACCATCTGCCCTACCTGCCCTTCCCCGACGACTGGCCGGTGTTTGCGCCCAAGGACAAGATCGGCGAC TGGCTGGAGATGTACACCAAGGTCATGGAGATCAATTACTGGGCCTCGACCGAATGCAAAAGCGCGCAGTACGACGAGGC CGCAGGGCAATGGACCGTCAACGTCGAACGCGCAGGCCAGCCGGTCACGCTGCGGCCCACGCAACTGGTGCTGGCCACCG GCATCGCCTCGTTTCCGAACCTGGTCCGCTTCCCGGGCGCCGAGCGCTTCAAGGGCGTGCAGCACCACTCCAGCCGCCAT CCCGGCGGCGATGGCTATGCCGGCAAGGACTGCATCGTCATCGGCTCCAACAACTCGGCCCATGACATCAGCGCCGACCT GTGGGAGCATGGCGCCAACGTCACCATGGTGCAGCGCTCCTCGACCCTGGTCGCCAAATCCGAAACACTGATGGAACTGG GCCTGGGCGACCTGTACTCCGAGCGCGCGCTCAGCAACGGCATCAGCACCGACAAGGCCGACCTGATTTTTGCCTCGCTG CCCTACAAAGTCCTGCCGGCCCTGCAAGTGCCGGTCTATCAGGAGATGGCGCGGCGCGATGCCGACCTGTACGAACGGCT GAAAAAGGTCGGCTTCAAGCTCGACTTCGGCGAGGACGACTCCGGCGTGTTCATGAAAGCCGTGCGCCGTGGCGGCGGCT ACTACATCGATGTCGGCGCCTCGGAGTTGGTCGCCACAGGCAAGATCAAATTGAAAAGCGGCGTCACCGTCAAAGAAATC AAGGAGCATTCGGTGCTCTTTAGCGACGGCACCGAGTTGCCGGCCGATCTGATCGTCTATGCCACGGGCTACGGCTCGAT GGATGGCTGGATCGCCCAGTTGATCTCGCAGCAAGTGGCCGACAAGGTCGGACTGTGCTGGGGCCTGGGCTCGGGCACCA CCAAAGACCCCGGCCCCTGGGAAGGCGAACTGCGCAACATGTGGAAGCCGACCCGGCAACCCGGCCTGTGGCTGCATGGC GGCAACCTGCACCTGTCGCGCCACTATTCACAATTCCTGGCGTTGCAGCTCAAGGCCCGCATGGAAAACCTGCCGACGCC GGTCTATGGCATGAGTCCGGTGCCGCAGACCGCTTGA
Upstream 100 bases:
>100_bases TTCATCGTGATACAAAAAGAGTTCCGGTCAGCGGACATGAACCCATGTCCACCGCTGTGTCGGGCCATCACGATCCACCC CCCATTGAAGAGGCATACCC
Downstream 100 bases:
>100_bases GCCAGCGCCCGCCAACCGCCCGGAGTGCGCGCCCCCCGGGCGGTTGGTTCCACATGAAGTGGCCAAACGAGGCCGCCGGC ATCGGCGGCAATGCGCGCCA
Product: putative potassium transport flavoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 598; Mature: 598
Protein sequence:
>598_residues MIDLSPTQQVSHWLTAFEQALAKGDVAQAAAMFDADSYWRDLVAFTWNIKTCEGQAAIADMLGTVLAGVQPSNWRLEGEA SQANGLTEAWFTFETATARGLGQLRLKGDKCWTLLTTMAELKDFPERKGPARALGTVHGVVRGRKNWLDHKTEEEATLGY SRQPYCLIIGGGQCGIALAARLRRLDVPTIVIERQARAGDSWRNRYKSLCLHDPVWYDHLPYLPFPDDWPVFAPKDKIGD WLEMYTKVMEINYWASTECKSAQYDEAAGQWTVNVERAGQPVTLRPTQLVLATGIASFPNLVRFPGAERFKGVQHHSSRH PGGDGYAGKDCIVIGSNNSAHDISADLWEHGANVTMVQRSSTLVAKSETLMELGLGDLYSERALSNGISTDKADLIFASL PYKVLPALQVPVYQEMARRDADLYERLKKVGFKLDFGEDDSGVFMKAVRRGGGYYIDVGASELVATGKIKLKSGVTVKEI KEHSVLFSDGTELPADLIVYATGYGSMDGWIAQLISQQVADKVGLCWGLGSGTTKDPGPWEGELRNMWKPTRQPGLWLHG GNLHLSRHYSQFLALQLKARMENLPTPVYGMSPVPQTA
Sequences:
>Translated_598_residues MIDLSPTQQVSHWLTAFEQALAKGDVAQAAAMFDADSYWRDLVAFTWNIKTCEGQAAIADMLGTVLAGVQPSNWRLEGEA SQANGLTEAWFTFETATARGLGQLRLKGDKCWTLLTTMAELKDFPERKGPARALGTVHGVVRGRKNWLDHKTEEEATLGY SRQPYCLIIGGGQCGIALAARLRRLDVPTIVIERQARAGDSWRNRYKSLCLHDPVWYDHLPYLPFPDDWPVFAPKDKIGD WLEMYTKVMEINYWASTECKSAQYDEAAGQWTVNVERAGQPVTLRPTQLVLATGIASFPNLVRFPGAERFKGVQHHSSRH PGGDGYAGKDCIVIGSNNSAHDISADLWEHGANVTMVQRSSTLVAKSETLMELGLGDLYSERALSNGISTDKADLIFASL PYKVLPALQVPVYQEMARRDADLYERLKKVGFKLDFGEDDSGVFMKAVRRGGGYYIDVGASELVATGKIKLKSGVTVKEI KEHSVLFSDGTELPADLIVYATGYGSMDGWIAQLISQQVADKVGLCWGLGSGTTKDPGPWEGELRNMWKPTRQPGLWLHG GNLHLSRHYSQFLALQLKARMENLPTPVYGMSPVPQTA >Mature_598_residues MIDLSPTQQVSHWLTAFEQALAKGDVAQAAAMFDADSYWRDLVAFTWNIKTCEGQAAIADMLGTVLAGVQPSNWRLEGEA SQANGLTEAWFTFETATARGLGQLRLKGDKCWTLLTTMAELKDFPERKGPARALGTVHGVVRGRKNWLDHKTEEEATLGY SRQPYCLIIGGGQCGIALAARLRRLDVPTIVIERQARAGDSWRNRYKSLCLHDPVWYDHLPYLPFPDDWPVFAPKDKIGD WLEMYTKVMEINYWASTECKSAQYDEAAGQWTVNVERAGQPVTLRPTQLVLATGIASFPNLVRFPGAERFKGVQHHSSRH PGGDGYAGKDCIVIGSNNSAHDISADLWEHGANVTMVQRSSTLVAKSETLMELGLGDLYSERALSNGISTDKADLIFASL PYKVLPALQVPVYQEMARRDADLYERLKKVGFKLDFGEDDSGVFMKAVRRGGGYYIDVGASELVATGKIKLKSGVTVKEI KEHSVLFSDGTELPADLIVYATGYGSMDGWIAQLISQQVADKVGLCWGLGSGTTKDPGPWEGELRNMWKPTRQPGLWLHG GNLHLSRHYSQFLALQLKARMENLPTPVYGMSPVPQTA
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4503757, Length=362, Percent_Identity=26.7955801104972, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI4503759, Length=356, Percent_Identity=23.876404494382, Blast_Score=79, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR000103 [H]
Pfam domain/function: PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 66071; Mature: 66071
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDLSPTQQVSHWLTAFEQALAKGDVAQAAAMFDADSYWRDLVAFTWNIKTCEGQAAIAD CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHEEEEEEECCCHHHHHH MLGTVLAGVQPSNWRLEGEASQANGLTEAWFTFETATARGLGQLRLKGDKCWTLLTTMAE HHHHHHHCCCCCCEEEECCCHHCCCCEEHHEEEEHHHHCCCCEEEECCCHHHHHHHHHHH LKDFPERKGPARALGTVHGVVRGRKNWLDHKTEEEATLGYSRQPYCLIIGGGQCGIALAA HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEEEECCCHHHHHHH RLRRLDVPTIVIERQARAGDSWRNRYKSLCLHDPVWYDHLPYLPFPDDWPVFAPKDKIGD HHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH WLEMYTKVMEINYWASTECKSAQYDEAAGQWTVNVERAGQPVTLRPTQLVLATGIASFPN HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCHHHHHHHHHHHCCH LVRFPGAERFKGVQHHSSRHPGGDGYAGKDCIVIGSNNSAHDISADLWEHGANVTMVQRS HHCCCCHHHHCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCEEEEECC STLVAKSETLMELGLGDLYSERALSNGISTDKADLIFASLPYKVLPALQVPVYQEMARRD CEEEHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEECCCHHHHCCCCCHHHHHHHHCC ADLYERLKKVGFKLDFGEDDSGVFMKAVRRGGGYYIDVGASELVATGKIKLKSGVTVKEI HHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCEEEECCCHHEEEECEEEECCCCCHHHH KEHSVLFSDGTELPADLIVYATGYGSMDGWIAQLISQQVADKVGLCWGLGSGTTKDPGPW HHCCEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCC EGELRNMWKPTRQPGLWLHGGNLHLSRHYSQFLALQLKARMENLPTPVYGMSPVPQTA CHHHHHHCCCCCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MIDLSPTQQVSHWLTAFEQALAKGDVAQAAAMFDADSYWRDLVAFTWNIKTCEGQAAIAD CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHEEEEEEECCCHHHHHH MLGTVLAGVQPSNWRLEGEASQANGLTEAWFTFETATARGLGQLRLKGDKCWTLLTTMAE HHHHHHHCCCCCCEEEECCCHHCCCCEEHHEEEEHHHHCCCCEEEECCCHHHHHHHHHHH LKDFPERKGPARALGTVHGVVRGRKNWLDHKTEEEATLGYSRQPYCLIIGGGQCGIALAA HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEEEECCCHHHHHHH RLRRLDVPTIVIERQARAGDSWRNRYKSLCLHDPVWYDHLPYLPFPDDWPVFAPKDKIGD HHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH WLEMYTKVMEINYWASTECKSAQYDEAAGQWTVNVERAGQPVTLRPTQLVLATGIASFPN HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCHHHHHHHHHHHCCH LVRFPGAERFKGVQHHSSRHPGGDGYAGKDCIVIGSNNSAHDISADLWEHGANVTMVQRS HHCCCCHHHHCCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCEEEEECC STLVAKSETLMELGLGDLYSERALSNGISTDKADLIFASLPYKVLPALQVPVYQEMARRD CEEEHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEEEECCCHHHHCCCCCHHHHHHHHCC ADLYERLKKVGFKLDFGEDDSGVFMKAVRRGGGYYIDVGASELVATGKIKLKSGVTVKEI HHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCEEEECCCHHEEEECEEEECCCCCHHHH KEHSVLFSDGTELPADLIVYATGYGSMDGWIAQLISQQVADKVGLCWGLGSGTTKDPGPW HHCCEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCC EGELRNMWKPTRQPGLWLHGGNLHLSRHYSQFLALQLKARMENLPTPVYGMSPVPQTA CHHHHHHCCCCCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA