| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611271
Identifier: 121611271
GI number: 121611271
Start: 4800063
End: 4800725
Strand: Direct
Name: 121611271
Synonym: Veis_4357
Alternate gene names: NA
Gene position: 4800063-4800725 (Clockwise)
Preceding gene: 121611270
Following gene: 121611272
Centisome position: 86.23
GC content: 71.79
Gene sequence:
>663_bases ATGCTGCCGACGCCACAAGCCCGCACCCCGTCCACGCTGGCGCAGCAGCGCACGGCGCCAGCCCCGCTCGCCTGCGCCCT GGCGCTGGTGATTGCACCGGTCGCCGCGCTGGCGCAGGTGCCGGCGGTCGAGACCGTCGCCAAGACATCTGCCGCCCCGG CGCCGGCTGACAGGAGGCCGCTGCGCGCCAAAAGCGCGCGCCGGACCCCGGCCACCTCGGCCTCACTTGGCGCCATCAAG GCCACGCTCTCGGCGGCCGAATTGGCCATCGCCGAGCATGTGCATGTGGGCCGCATGCCTTGCGAGTTGGGCGCTTTCGT GACGGTCACGGCCGATCCTGCCACGCCCGGTTACTTTCATGTGCAGGGCAAGGGCTTCAAGTACCACATGGCGCCGGTGC TCACGTCCACCGGCACGGCGCGGCTGGAGGACACCAAGGGCGGCGCCGTCTGGCTGCAAATTGCGAACAAGTCGATGCTG ATGAGCCAGCGGCTGGGCCGGCGCCTGGCCGATGCGTGCATGAGCCCGGCGCAGATGCTGGCGGCCGAGGCCTTCGGCAA GAACCCGCCGCCGAGCCTTCTGGAGCCGCTGCCTGCGCCCCCGGTGGCGCCCCGGGCGGCACCCACGGAATACCCGACTG ACGCCCAAGTGGCCCCCCAGTGA
Upstream 100 bases:
>100_bases TGGATGCGTTCTCGCAACAGCGCATCCAGGCCACGCTGGCCGAGCTTCAGGCCGAGCAAGACGGCGTCAGGCATCTGCTG TAAGCCACCGAGCGCACGCC
Downstream 100 bases:
>100_bases CCCGGCAAGCCACGCGGCGCGCCCCCTCCCCCCGATTCGAATGACTCCCCTCACTGGAGAAAAAAGATGTTGCAAGCCTA CAGAGACCATGCCGCCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MLPTPQARTPSTLAQQRTAPAPLACALALVIAPVAALAQVPAVETVAKTSAAPAPADRRPLRAKSARRTPATSASLGAIK ATLSAAELAIAEHVHVGRMPCELGAFVTVTADPATPGYFHVQGKGFKYHMAPVLTSTGTARLEDTKGGAVWLQIANKSML MSQRLGRRLADACMSPAQMLAAEAFGKNPPPSLLEPLPAPPVAPRAAPTEYPTDAQVAPQ
Sequences:
>Translated_220_residues MLPTPQARTPSTLAQQRTAPAPLACALALVIAPVAALAQVPAVETVAKTSAAPAPADRRPLRAKSARRTPATSASLGAIK ATLSAAELAIAEHVHVGRMPCELGAFVTVTADPATPGYFHVQGKGFKYHMAPVLTSTGTARLEDTKGGAVWLQIANKSML MSQRLGRRLADACMSPAQMLAAEAFGKNPPPSLLEPLPAPPVAPRAAPTEYPTDAQVAPQ >Mature_220_residues MLPTPQARTPSTLAQQRTAPAPLACALALVIAPVAALAQVPAVETVAKTSAAPAPADRRPLRAKSARRTPATSASLGAIK ATLSAAELAIAEHVHVGRMPCELGAFVTVTADPATPGYFHVQGKGFKYHMAPVLTSTGTARLEDTKGGAVWLQIANKSML MSQRLGRRLADACMSPAQMLAAEAFGKNPPPSLLEPLPAPPVAPRAAPTEYPTDAQVAPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22747; Mature: 22747
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPTPQARTPSTLAQQRTAPAPLACALALVIAPVAALAQVPAVETVAKTSAAPAPADRRP CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCC LRAKSARRTPATSASLGAIKATLSAAELAIAEHVHVGRMPCELGAFVTVTADPATPGYFH CCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEE VQGKGFKYHMAPVLTSTGTARLEDTKGGAVWLQIANKSMLMSQRLGRRLADACMSPAQML EECCCEEEEECHHEECCCCCEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHH AAEAFGKNPPPSLLEPLPAPPVAPRAAPTEYPTDAQVAPQ HHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLPTPQARTPSTLAQQRTAPAPLACALALVIAPVAALAQVPAVETVAKTSAAPAPADRRP CCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCC LRAKSARRTPATSASLGAIKATLSAAELAIAEHVHVGRMPCELGAFVTVTADPATPGYFH CCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEE VQGKGFKYHMAPVLTSTGTARLEDTKGGAVWLQIANKSMLMSQRLGRRLADACMSPAQML EECCCEEEEECHHEECCCCCEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCHHHHH AAEAFGKNPPPSLLEPLPAPPVAPRAAPTEYPTDAQVAPQ HHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA