| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is lplT [H]
Identifier: 121611252
GI number: 121611252
Start: 4779995
End: 4781299
Strand: Direct
Name: lplT [H]
Synonym: Veis_4338
Alternate gene names: 121611252
Gene position: 4779995-4781299 (Clockwise)
Preceding gene: 121611244
Following gene: 121611253
Centisome position: 85.87
GC content: 64.9
Gene sequence:
>1305_bases ATGAAGCGCGGTTTTTACACCATCATGTCGGCGCAGTTCTTCAGCTCGCTGGCCGACAACGCGCTTTTCGTGGCGGCCGT CGAACTGCTGCGAACCGAAGGTGTTCCCGAATGGCAACATGCCGCGCTGGTGCCGATGTTTGCTCTTTTCTATGTACTGC TGGCGCCCTTCGTGGGCGCTTTCGCCGACGCGCTGCCCAAAGGCCGGGTGATGTTCGTCAGCAATGCCATCAAGGCAGCA GGCTGCCTGATGATGCTGTACGGCTCGCACCCGCTGATGGCCTACGCCGTGGTCGGGCTGGGGGCTGCGGCCTACTCGCC GGCCAAGTACGGCATCCTCACCGAACTGCTGCCGGCGTCGCAATTGGTCAAGGCCAACGGCTGGATCGAGGGGCTGACCA TTGCGTCCGTCATCCTGGGCGTGCTGCTGGGCGGCCAGTTGGTCGGCCCGAGCCTGTCGAGCAAACTGCTGAGCATCGAC ATTCCGCTGATCGACACCGGGGTGGAAACCCCGGCCGAGTCGGCCATCGCCGTGCTGATCGCGGTGTACGCGCTGGCGGC CTGGTTCAATATCCGCATTCCGCACACCGGGGTCGAAATGCGCCCGCTGCGCGCCGACCCTGCGCGCAGCGTGTTCGCCA ACGCACTGGCGCTGCTGCCCGACTTTCATGCCTGCAACCGCCGCCTGTGGCGCGACAAGCTCGGCCAGATCTCGCTGGCC ACCACCACATTGTTCTGGGGCGTGGGCGGCAACCTCAAATTCATCGTGCTGGCCTGGGCCGCCGTGGCGCTGGGCTACAA CACCACCGAGGCATCGGCATTGACCGGCGTGGTCGCCATTGGCACGGCGGTGGGCGCCGTGCTGGCGTCACTGCGCATGC GCCTGTACATGGCCGACCGCGTGATTTCGCTGGGCATTGCGATGGGGCTGCTGCTGATCCTGATGGTGTTCATCCACGAC ATCTGGCTGGCGATCCCGCTGCTCATCCTACTCGGCGGCCTGGGCGGCTTCCTGGTGGTGCCGATGAACGCGTTGCTGCA GCACCGGGGCCATAACCTGATGGGCGCGGGCCGCTCGATCGCGGTGCAAAACTTCAACGAACAAGCCTGCATCCTGGGCC TGGGCGCGTTCTACAGCCTGTCGCTCAAGCTCGGCCTGTCGGTGTCTGCCGCGATCACGACATTTGGCCTGGTGGTCGGG GGCAGCATGTGGCTCATCCGCCAGTGGCACCAGCACAACTGCGTCAGGCACCGCGAAGAGGTCAGGCACCTGCTCGATAT CGCGCGGCACGATACACACCATTGA
Upstream 100 bases:
>100_bases GTGCAGCACGAGGCGGCCACGGTGGCGACAGTTCCATAACGATTTTTCACCCCCCATCCGACAGGTCATCAGCCAAGCTG CTGCAGCCACCAGCCATTCG
Downstream 100 bases:
>100_bases ACCGGCTGGATACGCCCAACGCCATCCATTTCTGGATGCACCATGCCAAAGAACACCGCACCGCTGCCTGATGGGGCGCT TGTGCTGTCATCCGCAGCGC
Product: lysophospholipid transporter LplT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MKRGFYTIMSAQFFSSLADNALFVAAVELLRTEGVPEWQHAALVPMFALFYVLLAPFVGAFADALPKGRVMFVSNAIKAA GCLMMLYGSHPLMAYAVVGLGAAAYSPAKYGILTELLPASQLVKANGWIEGLTIASVILGVLLGGQLVGPSLSSKLLSID IPLIDTGVETPAESAIAVLIAVYALAAWFNIRIPHTGVEMRPLRADPARSVFANALALLPDFHACNRRLWRDKLGQISLA TTTLFWGVGGNLKFIVLAWAAVALGYNTTEASALTGVVAIGTAVGAVLASLRMRLYMADRVISLGIAMGLLLILMVFIHD IWLAIPLLILLGGLGGFLVVPMNALLQHRGHNLMGAGRSIAVQNFNEQACILGLGAFYSLSLKLGLSVSAAITTFGLVVG GSMWLIRQWHQHNCVRHREEVRHLLDIARHDTHH
Sequences:
>Translated_434_residues MKRGFYTIMSAQFFSSLADNALFVAAVELLRTEGVPEWQHAALVPMFALFYVLLAPFVGAFADALPKGRVMFVSNAIKAA GCLMMLYGSHPLMAYAVVGLGAAAYSPAKYGILTELLPASQLVKANGWIEGLTIASVILGVLLGGQLVGPSLSSKLLSID IPLIDTGVETPAESAIAVLIAVYALAAWFNIRIPHTGVEMRPLRADPARSVFANALALLPDFHACNRRLWRDKLGQISLA TTTLFWGVGGNLKFIVLAWAAVALGYNTTEASALTGVVAIGTAVGAVLASLRMRLYMADRVISLGIAMGLLLILMVFIHD IWLAIPLLILLGGLGGFLVVPMNALLQHRGHNLMGAGRSIAVQNFNEQACILGLGAFYSLSLKLGLSVSAAITTFGLVVG GSMWLIRQWHQHNCVRHREEVRHLLDIARHDTHH >Mature_434_residues MKRGFYTIMSAQFFSSLADNALFVAAVELLRTEGVPEWQHAALVPMFALFYVLLAPFVGAFADALPKGRVMFVSNAIKAA GCLMMLYGSHPLMAYAVVGLGAAAYSPAKYGILTELLPASQLVKANGWIEGLTIASVILGVLLGGQLVGPSLSSKLLSID IPLIDTGVETPAESAIAVLIAVYALAAWFNIRIPHTGVEMRPLRADPARSVFANALALLPDFHACNRRLWRDKLGQISLA TTTLFWGVGGNLKFIVLAWAAVALGYNTTEASALTGVVAIGTAVGAVLASLRMRLYMADRVISLGIAMGLLLILMVFIHD IWLAIPLLILLGGLGGFLVVPMNALLQHRGHNLMGAGRSIAVQNFNEQACILGLGAFYSLSLKLGLSVSAAITTFGLVVG GSMWLIRQWHQHNCVRHREEVRHLLDIARHDTHH
Specific function: Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family [H]
Homologues:
Organism=Escherichia coli, GI1789200, Length=396, Percent_Identity=38.1313131313131, Blast_Score=221, Evalue=1e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46551; Mature: 46551
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRGFYTIMSAQFFSSLADNALFVAAVELLRTEGVPEWQHAALVPMFALFYVLLAPFVGA CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH FADALPKGRVMFVSNAIKAAGCLMMLYGSHPLMAYAVVGLGAAAYSPAKYGILTELLPAS HHHHCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCCHHHHHHHHHCCHH QLVKANGWIEGLTIASVILGVLLGGQLVGPSLSSKLLSIDIPLIDTGVETPAESAIAVLI HHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCEEEEECCEEECCCCCCHHHHHHHHH AVYALAAWFNIRIPHTGVEMRPLRADPARSVFANALALLPDFHACNRRLWRDKLGQISLA HHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEE TTTLFWGVGGNLKFIVLAWAAVALGYNTTEASALTGVVAIGTAVGAVLASLRMRLYMADR HHHEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VISLGIAMGLLLILMVFIHDIWLAIPLLILLGGLGGFLVVPMNALLQHRGHNLMGAGRSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEE AVQNFNEQACILGLGAFYSLSLKLGLSVSAAITTFGLVVGGSMWLIRQWHQHNCVRHREE EECCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH VRHLLDIARHDTHH HHHHHHHHHCCCCC >Mature Secondary Structure MKRGFYTIMSAQFFSSLADNALFVAAVELLRTEGVPEWQHAALVPMFALFYVLLAPFVGA CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH FADALPKGRVMFVSNAIKAAGCLMMLYGSHPLMAYAVVGLGAAAYSPAKYGILTELLPAS HHHHCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCCHHHHHHHHHCCHH QLVKANGWIEGLTIASVILGVLLGGQLVGPSLSSKLLSIDIPLIDTGVETPAESAIAVLI HHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCEEEEECCEEECCCCCCHHHHHHHHH AVYALAAWFNIRIPHTGVEMRPLRADPARSVFANALALLPDFHACNRRLWRDKLGQISLA HHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEE TTTLFWGVGGNLKFIVLAWAAVALGYNTTEASALTGVVAIGTAVGAVLASLRMRLYMADR HHHEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VISLGIAMGLLLILMVFIHDIWLAIPLLILLGGLGGFLVVPMNALLQHRGHNLMGAGRSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEE AVQNFNEQACILGLGAFYSLSLKLGLSVSAAITTFGLVVGGSMWLIRQWHQHNCVRHREE EECCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH VRHLLDIARHDTHH HHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA