| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
Click here to switch to the map view.
The map label for this gene is quiP [H]
Identifier: 121611219
GI number: 121611219
Start: 4747211
End: 4749136
Strand: Direct
Name: quiP [H]
Synonym: Veis_4305
Alternate gene names: 121611219
Gene position: 4747211-4749136 (Clockwise)
Preceding gene: 121611218
Following gene: 121611224
Centisome position: 85.28
GC content: 70.04
Gene sequence:
>1926_bases GTGGCAGTTGATGCCCCCTACCCCGGCGAGCAGCCCGCCGCCTCGGCGGACCTGGCGGCGCTGTATCGCCAATGGGGGGT TTACCGGCGTTCTCCGGCCACCGACCCCAGCACCAGCACCTCCGCCGCCACCGGACCGCAAGCAGCCGCCCCGGCCCGGC AAGACCCATGGCTTGGCCACGCCAACGATCTGAACGCCGGCCTGCTGGCCTGGGCCGAAGCGCTCACGCGCAATGCCGGC AGCAATGAAGGCCGGGGCAGCAACAACTGGGCGCTGGCAGGCACGCGCACGGTCAGTGGCCGACCGCTGCTGGCCAACGA CCCGCACCTGGGGCTGGCGGCGCCGGCGATCTGGTACTTTGCCGCGCTGCAAGCGCCTGCGGGGCAGGCCTCGGACGGCA CGCCGATCGCCCCGTTGGCCGCAGTCGGGGCCACCTTGCCCGGCCTGCCTTTCGTGGTGCTGGGCCGCACCGACCATGTG GCCTGGGGCTTTACCAACACCAGCCCCGACGTGCAGGACCTGTACCTGGAGCAGATCAACCCCGCCGATCCCACGCAATA CCGCACCCCCGAGGGCTGGGCGCCGTTCACGGTGCGCACCGAAACCATCCGCGTCAAAGGGGCCGCCGATACCGTGCTCA GGCTGCGCAGCACCCGCCATGGCCCGGTGCTGAGCGATGTGCAAAAGTCGCATGCCGAGGTGCTGGACCTGGACAAATAC CTGATCGCGCTACGCTGGAGTGCGCTCGACGCCGACAACCAGAGCGTGATGGCGGGCCTGCAAACCAACCAGGCCCGGAC GGTCGATGAATTGTTCCAGGCCATGTCACCGTATCACTCGCCGATGCAGAACGTGGTGGCGGCCGACGACCAGGGCCGGA TCCGTTTCCAGGCCATGGGCCGGGTGCCGCTGCGCGATCCCGCCAACGACATCCGGGGCGTGGCCCCGGCGCCCGGCTGG CAGGCGCGCTACGACTGGACGGGTTGGCTGCCTGCGGCGCAGACCCCGCGCGACGACGGCGCCAAGGGCTGGGTGGCCAC GGCCAACCAGCGCGTGACGGCGCCGGACTACCCGCATTACCTGACGCAAGACTGGGTTCTGCCCTACCGCTATCAGCGCA TAGAACAGCTCATCGAGGCCCGCGAAAAGCACGACATCGCCAGCATGCAGGCCATGCAGCATGATGTGACATCGCTGGCC ACGCGCCGGCTGCTGCCCTCTCTGCGACAGGCCCGCTCGCCGCATCCGCTGGCCGCGCCCGTGCAAGCGCTGCTGGCGAA CTTTGACGCCGTGATGGATGCCGACCAAGCGGCGCCCCTGGTGTTTGCCGCCTGGGCCGATGAGCTCACGCGCGGCCTGA TCGAGCCGCGCATCGGCCAGGCGCGCTTTGCCGCCACCTATGGCAAGCGCGACTACCGGGCGGCGCTGGAAGGCATCCTG GAACGCAACGACGGCTGGTGGTGCCAGCCCATGTCCTGCGCCGAGCAATCCTCTGCCGCGCTGACCCGTGCGCTGGAGCG CCTGCAAACGGCCTATGGCCCCGACCCGGCACAGTGGCGCTGGGGCATTGCGCACCCGGCGCTGAGCGAGCACCAGCCGT TTGGCAACGTGCCGGCGCTGGCCCGTTTTTTCAACGTCCGCGTCGCCTCGCATGGCGACTCGTACACCGTGAACGTGGGG CAGTACAACCCGGGCCAGACCCGGGGGCCGTTCGTGAACCGCCATGCGGCCTCGCTGCGCGCGGTGTATGACTTGGCGGA CCTGGAGCAGTCGCGCTTCATCTACCAGACCGGCCAGAGCGGGCTGGTGTTCTCGCCCCGCTACCGCGACATGAGCGCCG CCTGGGCCGCCACCGGCTACCGCCCCCTGCAACGCCGGCCAGCGCATTGGGCGCATCGGCTGACCCTGGTGCCTGCTGCT CCGTGA
Upstream 100 bases:
>100_bases GCGTGGGCTGGACGCTGATGATGGCGCTGGACCTGGGCGGCAACTGGGGCCAGGAATTCGCGCGTCTGGCACTCGCCAGG ACGCTGGACACGGACCGCCT
Downstream 100 bases:
>100_bases GCCTGCGGGCCGCCGCCCATTGCGTAGCCCGTTCAGTAACGGATGCTGCCGGCGCAAGACCCGCAAGACCCAGATGCGCC GACAGCGATGAAAACGAGAG
Product: penicillin amidase
Products: NA
Alternate protein names: AHL acylase quiP; Acyl-HSL acylase quiP; Quorum signal utilization and inactivation protein; Acyl-HSL acylase quiP subunit alpha; Acyl-HSL acylase quiP subunit beta [H]
Number of amino acids: Translated: 641; Mature: 640
Protein sequence:
>641_residues MAVDAPYPGEQPAASADLAALYRQWGVYRRSPATDPSTSTSAATGPQAAAPARQDPWLGHANDLNAGLLAWAEALTRNAG SNEGRGSNNWALAGTRTVSGRPLLANDPHLGLAAPAIWYFAALQAPAGQASDGTPIAPLAAVGATLPGLPFVVLGRTDHV AWGFTNTSPDVQDLYLEQINPADPTQYRTPEGWAPFTVRTETIRVKGAADTVLRLRSTRHGPVLSDVQKSHAEVLDLDKY LIALRWSALDADNQSVMAGLQTNQARTVDELFQAMSPYHSPMQNVVAADDQGRIRFQAMGRVPLRDPANDIRGVAPAPGW QARYDWTGWLPAAQTPRDDGAKGWVATANQRVTAPDYPHYLTQDWVLPYRYQRIEQLIEAREKHDIASMQAMQHDVTSLA TRRLLPSLRQARSPHPLAAPVQALLANFDAVMDADQAAPLVFAAWADELTRGLIEPRIGQARFAATYGKRDYRAALEGIL ERNDGWWCQPMSCAEQSSAALTRALERLQTAYGPDPAQWRWGIAHPALSEHQPFGNVPALARFFNVRVASHGDSYTVNVG QYNPGQTRGPFVNRHAASLRAVYDLADLEQSRFIYQTGQSGLVFSPRYRDMSAAWAATGYRPLQRRPAHWAHRLTLVPAA P
Sequences:
>Translated_641_residues MAVDAPYPGEQPAASADLAALYRQWGVYRRSPATDPSTSTSAATGPQAAAPARQDPWLGHANDLNAGLLAWAEALTRNAG SNEGRGSNNWALAGTRTVSGRPLLANDPHLGLAAPAIWYFAALQAPAGQASDGTPIAPLAAVGATLPGLPFVVLGRTDHV AWGFTNTSPDVQDLYLEQINPADPTQYRTPEGWAPFTVRTETIRVKGAADTVLRLRSTRHGPVLSDVQKSHAEVLDLDKY LIALRWSALDADNQSVMAGLQTNQARTVDELFQAMSPYHSPMQNVVAADDQGRIRFQAMGRVPLRDPANDIRGVAPAPGW QARYDWTGWLPAAQTPRDDGAKGWVATANQRVTAPDYPHYLTQDWVLPYRYQRIEQLIEAREKHDIASMQAMQHDVTSLA TRRLLPSLRQARSPHPLAAPVQALLANFDAVMDADQAAPLVFAAWADELTRGLIEPRIGQARFAATYGKRDYRAALEGIL ERNDGWWCQPMSCAEQSSAALTRALERLQTAYGPDPAQWRWGIAHPALSEHQPFGNVPALARFFNVRVASHGDSYTVNVG QYNPGQTRGPFVNRHAASLRAVYDLADLEQSRFIYQTGQSGLVFSPRYRDMSAAWAATGYRPLQRRPAHWAHRLTLVPAA P >Mature_640_residues AVDAPYPGEQPAASADLAALYRQWGVYRRSPATDPSTSTSAATGPQAAAPARQDPWLGHANDLNAGLLAWAEALTRNAGS NEGRGSNNWALAGTRTVSGRPLLANDPHLGLAAPAIWYFAALQAPAGQASDGTPIAPLAAVGATLPGLPFVVLGRTDHVA WGFTNTSPDVQDLYLEQINPADPTQYRTPEGWAPFTVRTETIRVKGAADTVLRLRSTRHGPVLSDVQKSHAEVLDLDKYL IALRWSALDADNQSVMAGLQTNQARTVDELFQAMSPYHSPMQNVVAADDQGRIRFQAMGRVPLRDPANDIRGVAPAPGWQ ARYDWTGWLPAAQTPRDDGAKGWVATANQRVTAPDYPHYLTQDWVLPYRYQRIEQLIEAREKHDIASMQAMQHDVTSLAT RRLLPSLRQARSPHPLAAPVQALLANFDAVMDADQAAPLVFAAWADELTRGLIEPRIGQARFAATYGKRDYRAALEGILE RNDGWWCQPMSCAEQSSAALTRALERLQTAYGPDPAQWRWGIAHPALSEHQPFGNVPALARFFNVRVASHGDSYTVNVGQ YNPGQTRGPFVNRHAASLRAVYDLADLEQSRFIYQTGQSGLVFSPRYRDMSAAWAATGYRPLQRRPAHWAHRLTLVPAAP
Specific function: Catalyzes the deacylation of acyl-homoserine lactone (AHL or acyl-HSL), releasing homoserine lactone (HSL) and the corresponding fatty acid. Possesses a specificity for the degradation of long-chain acyl-HSLs (side chains of seven or more carbons in lengt
COG id: COG2366
COG function: function code R; Protein related to penicillin acylase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S45 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014395 - InterPro: IPR002692 [H]
Pfam domain/function: PF01804 Penicil_amidase [H]
EC number: =3.5.1.97 [H]
Molecular weight: Translated: 70130; Mature: 69999
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVDAPYPGEQPAASADLAALYRQWGVYRRSPATDPSTSTSAATGPQAAAPARQDPWLGH CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ANDLNAGLLAWAEALTRNAGSNEGRGSNNWALAGTRTVSGRPLLANDPHLGLAAPAIWYF CCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCEECCCCCCCHHHHHHHHH AALQAPAGQASDGTPIAPLAAVGATLPGLPFVVLGRTDHVAWGFTNTSPDVQDLYLEQIN HHHCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHCC PADPTQYRTPEGWAPFTVRTETIRVKGAADTVLRLRSTRHGPVLSDVQKSHAEVLDLDKY CCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LIALRWSALDADNQSVMAGLQTNQARTVDELFQAMSPYHSPMQNVVAADDQGRIRFQAMG HHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEEC RVPLRDPANDIRGVAPAPGWQARYDWTGWLPAAQTPRDDGAKGWVATANQRVTAPDYPHY CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCH LTQDWVLPYRYQRIEQLIEAREKHDIASMQAMQHDVTSLATRRLLPSLRQARSPHPLAAP HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VQALLANFDAVMDADQAAPLVFAAWADELTRGLIEPRIGQARFAATYGKRDYRAALEGIL HHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHH ERNDGWWCQPMSCAEQSSAALTRALERLQTAYGPDPAQWRWGIAHPALSEHQPFGNVPAL HCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCHHHH ARFFNVRVASHGDSYTVNVGQYNPGQTRGPFVNRHAASLRAVYDLADLEQSRFIYQTGQS HHHHHEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCC GLVFSPRYRDMSAAWAATGYRPLQRRPAHWAHRLTLVPAAP CCEECCCCCCCHHHHHHCCCCHHHCCCCCHHHEEEEECCCC >Mature Secondary Structure AVDAPYPGEQPAASADLAALYRQWGVYRRSPATDPSTSTSAATGPQAAAPARQDPWLGH CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ANDLNAGLLAWAEALTRNAGSNEGRGSNNWALAGTRTVSGRPLLANDPHLGLAAPAIWYF CCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCEECCCCCCCHHHHHHHHH AALQAPAGQASDGTPIAPLAAVGATLPGLPFVVLGRTDHVAWGFTNTSPDVQDLYLEQIN HHHCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHCC PADPTQYRTPEGWAPFTVRTETIRVKGAADTVLRLRSTRHGPVLSDVQKSHAEVLDLDKY CCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LIALRWSALDADNQSVMAGLQTNQARTVDELFQAMSPYHSPMQNVVAADDQGRIRFQAMG HHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEEC RVPLRDPANDIRGVAPAPGWQARYDWTGWLPAAQTPRDDGAKGWVATANQRVTAPDYPHY CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCH LTQDWVLPYRYQRIEQLIEAREKHDIASMQAMQHDVTSLATRRLLPSLRQARSPHPLAAP HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH VQALLANFDAVMDADQAAPLVFAAWADELTRGLIEPRIGQARFAATYGKRDYRAALEGIL HHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHH ERNDGWWCQPMSCAEQSSAALTRALERLQTAYGPDPAQWRWGIAHPALSEHQPFGNVPAL HCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCHHHH ARFFNVRVASHGDSYTVNVGQYNPGQTRGPFVNRHAASLRAVYDLADLEQSRFIYQTGQS HHHHHEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCC GLVFSPRYRDMSAAWAATGYRPLQRRPAHWAHRLTLVPAAP CCEECCCCCCCHHHHHHCCCCHHHCCCCCHHHEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]