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The map label for this gene is ytcJ [H]

Identifier: 121611210

GI number: 121611210

Start: 4738394

End: 4740067

Strand: Direct

Name: ytcJ [H]

Synonym: Veis_4295

Alternate gene names: 121611210

Gene position: 4738394-4740067 (Clockwise)

Preceding gene: 121611209

Following gene: 121611211

Centisome position: 85.12

GC content: 69.41

Gene sequence:

>1674_bases
ATGAACACCAGCCACGACACTACCGTCTACCCGGCCCGCAAGATCATCACCATGAACCCGATGCAGCCGCAGGCCAGCCA
TGTGGCGGTGCGCGACGGCCGCGTGCTGGCCGTGGGCACGCTCGCCGACATGCAGGCCTGGGGCCGGTTCACGCTCGACG
AACGCTTTGCCGCCAAGGTGCTGATGCCCGGCTTTGTCGAAGGCCACTGCCACCTCAAAGAAGGCAGCATGTGGAACTGG
ACCTACCTGGGCTGGTTCGACCGCCGCGACCCCGATGGCAAGCTCTGGCACGGCCTGCGCAGCATGGAGCAGGTGCTGGC
GCGGCTGTCGGAGGTGGCCGCGAAGATGGGCGCCGACGGCCGGCCCGACACCGAGCCGCTGATCGCCTGGGGGTTCGACC
CGATCTACTTCGGCGGCGAGCGCATGACGGTGCAGCATGTCGACCGCGCCAGCGCCACGCGCCCGATCGTCATCAGCCAC
GCCAACGGCCACCTGATGAACGTCAACAGCGCGATGCTGCGCAGCGCCGGGATCACGCGCGACAACGAGGTTGAGGGCGT
GGTCAGGTTCGCCAGCGGCGCCTGCGCAGGAGAGCCTACCGGCGAATTGCAAGAGCCGGCAGCGATGTTCCTGGTGCTGC
GCAAGGTCGGCCATGCCGGCCTGCTGGCGCCGCTGACCGAGGCCGGCATCCGCTCCTTCGCCCGCCTGGCCTGCCAGCAG
GGCGTGACCACCGCGACCGACCTGGTGAACAAACTGACGCCGCAAGACTGCGGCGTGCTGGAACGGGCGACGCAGGACGA
GGACTTCGGCGTGCGCATCCTGCCGGCCTTCCAGGCATTTCACGGCACGCATGGCGCCGCGCTCGGCGCCGGGCATGTGC
AGGGCCTGACGCTGCGCAACACCGACCGCCTGCGCTACGGCCTGGTGAAGATGATGCTCGACGGCTCGATACAGGGCTTC
TCGGCGCGGCTGCGCTGGCCGGGCTACTTCAACGGCGCGGCCAACGGCATCTGGGTGACGGCGCCTGCGCAGTACGAAGC
CGACTTCGAGACCTACCACCGGGCGGGCCTGACGATCCACACGCACACCAACGGCGACGAGGCCAGCGAACTGGCCATCG
CCGCCATCGAGCGGGTGCTGACGCGCGCGCCCCGCCCCGACCACCGCCACACGCTGCAACATGGCCAGATGATCGATGCG
CCACTGTTTCGCCGCATGGCGCAGTTGAACCTCTGCGCCAACCTGTTCGCCAACCACATCTGGTACTGGGGCGACCAGCA
CTACGAGATGAGCATGGGCCCGGACCGCGCCCACCGGATCGATGCCTGCGCCAGCGCGCTCGCAGCGGGCGTGCCGCTGG
CCATCCACAGCGACGCGCCGGTCACGCCGCTCGGGCCGCTGTTCACCGCCTGGTGCGCGGTCAACCGCATCACCCCCCAG
GGCCGGCTGCTGGGCCAGGCCGAGCGCATCACGGTGGCGCAGGCATTGCGCGCGATCACGCTCGGCGCGGCCTGGACGCT
CAAACTCGACGGCGAGATCGGCAGCATCGAAGTGGGCAAACGCGCCGACTTCTGCGTGCTGCACGACGACCCGCTGGAGA
GCGCGCCGATGGCGCTCAAGGATCTGCGCATATGGGGCACGGTGCTGTCGGGCCGGGTGTTCGAGGCGCAGTGA

Upstream 100 bases:

>100_bases
ATTGGGTGCGTTGCCGGCGCGTCGCCGTGATCGACGGCCTGCCGCACCCGCCGCTTTCGATCCCCACGGCGCCATCGGCG
CCATCAGCGCCATGAACGCC

Downstream 100 bases:

>100_bases
TGCACGGGCCTCGGCAGCGCCTGCCGCTGACCGTGGTCGGCGGCTTCCTGGGCGCCGGCAAGACCACGCTGCTCAACCAC
TGGCTGCGCCATGCCGGGGG

Product: amidohydrolase 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MNTSHDTTVYPARKIITMNPMQPQASHVAVRDGRVLAVGTLADMQAWGRFTLDERFAAKVLMPGFVEGHCHLKEGSMWNW
TYLGWFDRRDPDGKLWHGLRSMEQVLARLSEVAAKMGADGRPDTEPLIAWGFDPIYFGGERMTVQHVDRASATRPIVISH
ANGHLMNVNSAMLRSAGITRDNEVEGVVRFASGACAGEPTGELQEPAAMFLVLRKVGHAGLLAPLTEAGIRSFARLACQQ
GVTTATDLVNKLTPQDCGVLERATQDEDFGVRILPAFQAFHGTHGAALGAGHVQGLTLRNTDRLRYGLVKMMLDGSIQGF
SARLRWPGYFNGAANGIWVTAPAQYEADFETYHRAGLTIHTHTNGDEASELAIAAIERVLTRAPRPDHRHTLQHGQMIDA
PLFRRMAQLNLCANLFANHIWYWGDQHYEMSMGPDRAHRIDACASALAAGVPLAIHSDAPVTPLGPLFTAWCAVNRITPQ
GRLLGQAERITVAQALRAITLGAAWTLKLDGEIGSIEVGKRADFCVLHDDPLESAPMALKDLRIWGTVLSGRVFEAQ

Sequences:

>Translated_557_residues
MNTSHDTTVYPARKIITMNPMQPQASHVAVRDGRVLAVGTLADMQAWGRFTLDERFAAKVLMPGFVEGHCHLKEGSMWNW
TYLGWFDRRDPDGKLWHGLRSMEQVLARLSEVAAKMGADGRPDTEPLIAWGFDPIYFGGERMTVQHVDRASATRPIVISH
ANGHLMNVNSAMLRSAGITRDNEVEGVVRFASGACAGEPTGELQEPAAMFLVLRKVGHAGLLAPLTEAGIRSFARLACQQ
GVTTATDLVNKLTPQDCGVLERATQDEDFGVRILPAFQAFHGTHGAALGAGHVQGLTLRNTDRLRYGLVKMMLDGSIQGF
SARLRWPGYFNGAANGIWVTAPAQYEADFETYHRAGLTIHTHTNGDEASELAIAAIERVLTRAPRPDHRHTLQHGQMIDA
PLFRRMAQLNLCANLFANHIWYWGDQHYEMSMGPDRAHRIDACASALAAGVPLAIHSDAPVTPLGPLFTAWCAVNRITPQ
GRLLGQAERITVAQALRAITLGAAWTLKLDGEIGSIEVGKRADFCVLHDDPLESAPMALKDLRIWGTVLSGRVFEAQ
>Mature_557_residues
MNTSHDTTVYPARKIITMNPMQPQASHVAVRDGRVLAVGTLADMQAWGRFTLDERFAAKVLMPGFVEGHCHLKEGSMWNW
TYLGWFDRRDPDGKLWHGLRSMEQVLARLSEVAAKMGADGRPDTEPLIAWGFDPIYFGGERMTVQHVDRASATRPIVISH
ANGHLMNVNSAMLRSAGITRDNEVEGVVRFASGACAGEPTGELQEPAAMFLVLRKVGHAGLLAPLTEAGIRSFARLACQQ
GVTTATDLVNKLTPQDCGVLERATQDEDFGVRILPAFQAFHGTHGAALGAGHVQGLTLRNTDRLRYGLVKMMLDGSIQGF
SARLRWPGYFNGAANGIWVTAPAQYEADFETYHRAGLTIHTHTNGDEASELAIAAIERVLTRAPRPDHRHTLQHGQMIDA
PLFRRMAQLNLCANLFANHIWYWGDQHYEMSMGPDRAHRIDACASALAAGVPLAIHSDAPVTPLGPLFTAWCAVNRITPQ
GRLLGQAERITVAQALRAITLGAAWTLKLDGEIGSIEVGKRADFCVLHDDPLESAPMALKDLRIWGTVLSGRVFEAQ

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 60975; Mature: 60975

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSHDTTVYPARKIITMNPMQPQASHVAVRDGRVLAVGTLADMQAWGRFTLDERFAAKV
CCCCCCCEEECCEEEEEECCCCCCCCEEEEECCCEEEEECHHHHHHHCCCCHHHHHHHHH
LMPGFVEGHCHLKEGSMWNWTYLGWFDRRDPDGKLWHGLRSMEQVLARLSEVAAKMGADG
HCCCEECCEEEEECCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RPDTEPLIAWGFDPIYFGGERMTVQHVDRASATRPIVISHANGHLMNVNSAMLRSAGITR
CCCCCCEEEECCCEEEECCCEEEEEHHHHCCCCCCEEEECCCCCEEECCHHHHHHCCCCC
DNEVEGVVRFASGACAGEPTGELQEPAAMFLVLRKVGHAGLLAPLTEAGIRSFARLACQQ
CCCHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
GVTTATDLVNKLTPQDCGVLERATQDEDFGVRILPAFQAFHGTHGAALGAGHVQGLTLRN
CCCHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEEEHHHHHCCCCCCEECCCCCCEEEECC
TDRLRYGLVKMMLDGSIQGFSARLRWPGYFNGAANGIWVTAPAQYEADFETYHRAGLTIH
CCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCHHHHHHCCCEEE
THTNGDEASELAIAAIERVLTRAPRPDHRHTLQHGQMIDAPLFRRMAQLNLCANLFANHI
ECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCE
WYWGDQHYEMSMGPDRAHRIDACASALAAGVPLAIHSDAPVTPLGPLFTAWCAVNRITPQ
EEECCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCC
GRLLGQAERITVAQALRAITLGAAWTLKLDGEIGSIEVGKRADFCVLHDDPLESAPMALK
CHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCEEEEECCCCCCCCHHHH
DLRIWGTVLSGRVFEAQ
HHHHHHHHHCCEEECCC
>Mature Secondary Structure
MNTSHDTTVYPARKIITMNPMQPQASHVAVRDGRVLAVGTLADMQAWGRFTLDERFAAKV
CCCCCCCEEECCEEEEEECCCCCCCCEEEEECCCEEEEECHHHHHHHCCCCHHHHHHHHH
LMPGFVEGHCHLKEGSMWNWTYLGWFDRRDPDGKLWHGLRSMEQVLARLSEVAAKMGADG
HCCCEECCEEEEECCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RPDTEPLIAWGFDPIYFGGERMTVQHVDRASATRPIVISHANGHLMNVNSAMLRSAGITR
CCCCCCEEEECCCEEEECCCEEEEEHHHHCCCCCCEEEECCCCCEEECCHHHHHHCCCCC
DNEVEGVVRFASGACAGEPTGELQEPAAMFLVLRKVGHAGLLAPLTEAGIRSFARLACQQ
CCCHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
GVTTATDLVNKLTPQDCGVLERATQDEDFGVRILPAFQAFHGTHGAALGAGHVQGLTLRN
CCCHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEEEHHHHHCCCCCCEECCCCCCEEEECC
TDRLRYGLVKMMLDGSIQGFSARLRWPGYFNGAANGIWVTAPAQYEADFETYHRAGLTIH
CCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCHHHHHHCCCEEE
THTNGDEASELAIAAIERVLTRAPRPDHRHTLQHGQMIDAPLFRRMAQLNLCANLFANHI
ECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCE
WYWGDQHYEMSMGPDRAHRIDACASALAAGVPLAIHSDAPVTPLGPLFTAWCAVNRITPQ
EEECCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCC
GRLLGQAERITVAQALRAITLGAAWTLKLDGEIGSIEVGKRADFCVLHDDPLESAPMALK
CHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCEEEEECCCCCCCCHHHH
DLRIWGTVLSGRVFEAQ
HHHHHHHHHCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]