| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is dch [H]
Identifier: 121611108
GI number: 121611108
Start: 4617107
End: 4617964
Strand: Direct
Name: dch [H]
Synonym: Veis_4192
Alternate gene names: 121611108
Gene position: 4617107-4617964 (Clockwise)
Preceding gene: 121611107
Following gene: 121611109
Centisome position: 82.94
GC content: 71.33
Gene sequence:
>858_bases ATGGACACAGCAACCCCCACCGTCCCCCAAGATGCCCCCGTGCGCTGCGTGTCGCGCGGCGCCGTCTTCCAGATCGAACT GAACCACCCCGAAGCGCGCAATCCGCTCGGCCCCGAGATGATCGATGCGCTCGATGCCGCGCTCACGCAGGCCATCGAGA TGCCGGCCGCACGCGTCGTGCTGATCACGGCCGCAGGCGAGGCCTTCAGCGCAGGCGGCAACCTCGGCAACATGGCCGAG CGCCTGAACGCGCCGCCCGGCGCCAACGGCAAGGACCCGATCGCCCAAGGCAACCGGCGCTATGGCGACTTCCTGCGCAG GCTCTGCAGTGCGCCGAAGGTGGTGGTGGCCAGCGTGCGCGGTGCCGCGATGGGCGGCGGTGCGGGGCTGGTGTGCGCAG CCGACATCGCCATCGGCGCGCAGGGTGCGAAGTTCGGTTTTCCCGAAGCGGCCATCGGCCTCGTGCCCGGGCAGATCCTG CCCTTCGTCGCAGCGCGCATCGGCGCACAGGCCGCGCGCCGCCTCATGCTCACGGGCGAGCGCATCGATGCTGCCGAAGC GCATCGCATCGGCCTGCTCGACTACCACGTGGCCGATCCCGAGCAACTGGCTGCGCGCACCGACGAACTGCTGGCACGCA TCGTCGCCTGCGCGCCCGGCGCTTCGGCCGCCACCAAGCAGATGCTCCACACGGTGCTCGGCGCCAAGCGCTGGTGGAGC GACGAGTTGCCCGGCTACCTCGACGAGGCCGCCGACACCTTCGCGCGGCAGATGCGCAGCGAGGCCATCGAAGGCGTCGC CGCTGCGCGCGGCAAGCGGGCGCCGAACTGGCAGCAGGTCATCGCCGCGCGCGATTGA
Upstream 100 bases:
>100_bases TGCCGCGCTGATGCAGGCGCGCGTGCTCGCCTCGTCGCCCACGCCGCACTGACGCACTGACGCACTGACCACGCCACTCC CTCCCCTCCTGAAGCACACC
Downstream 100 bases:
>100_bases AGAGAACACATTTTAAGGGGGCGGCATGACCATCGATGCCGTCATCGTTTCCACCGCACGAACGCCCATCGGCAAGGCCT ACCGCGGCGCCTTCAACGAC
Product: enoyl-CoA hydratase/isomerase
Products: NA
Alternate protein names: Cyclohexa-1,5-diene-1-carboxyl-CoA hydratase; Dienoyl-CoA hydratase [H]
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MDTATPTVPQDAPVRCVSRGAVFQIELNHPEARNPLGPEMIDALDAALTQAIEMPAARVVLITAAGEAFSAGGNLGNMAE RLNAPPGANGKDPIAQGNRRYGDFLRRLCSAPKVVVASVRGAAMGGGAGLVCAADIAIGAQGAKFGFPEAAIGLVPGQIL PFVAARIGAQAARRLMLTGERIDAAEAHRIGLLDYHVADPEQLAARTDELLARIVACAPGASAATKQMLHTVLGAKRWWS DELPGYLDEAADTFARQMRSEAIEGVAAARGKRAPNWQQVIAARD
Sequences:
>Translated_285_residues MDTATPTVPQDAPVRCVSRGAVFQIELNHPEARNPLGPEMIDALDAALTQAIEMPAARVVLITAAGEAFSAGGNLGNMAE RLNAPPGANGKDPIAQGNRRYGDFLRRLCSAPKVVVASVRGAAMGGGAGLVCAADIAIGAQGAKFGFPEAAIGLVPGQIL PFVAARIGAQAARRLMLTGERIDAAEAHRIGLLDYHVADPEQLAARTDELLARIVACAPGASAATKQMLHTVLGAKRWWS DELPGYLDEAADTFARQMRSEAIEGVAAARGKRAPNWQQVIAARD >Mature_285_residues MDTATPTVPQDAPVRCVSRGAVFQIELNHPEARNPLGPEMIDALDAALTQAIEMPAARVVLITAAGEAFSAGGNLGNMAE RLNAPPGANGKDPIAQGNRRYGDFLRRLCSAPKVVVASVRGAAMGGGAGLVCAADIAIGAQGAKFGFPEAAIGLVPGQIL PFVAARIGAQAARRLMLTGERIDAAEAHRIGLLDYHVADPEQLAARTDELLARIVACAPGASAATKQMLHTVLGAKRWWS DELPGYLDEAADTFARQMRSEAIEGVAAARGKRAPNWQQVIAARD
Specific function: Catalyzes the hydration of cyclohexa-1,5-diene-1- carboxyl-CoA [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=291, Percent_Identity=27.8350515463918, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI37594471, Length=255, Percent_Identity=29.0196078431373, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI37594469, Length=255, Percent_Identity=29.0196078431373, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI70995211, Length=221, Percent_Identity=31.6742081447964, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI31542718, Length=267, Percent_Identity=26.9662921348315, Blast_Score=72, Evalue=8e-13, Organism=Escherichia coli, GI221142681, Length=287, Percent_Identity=30.6620209059233, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787660, Length=267, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1787659, Length=268, Percent_Identity=29.1044776119403, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI87082183, Length=275, Percent_Identity=27.6363636363636, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1788597, Length=193, Percent_Identity=30.5699481865285, Blast_Score=66, Evalue=3e-12, Organism=Caenorhabditis elegans, GI25145438, Length=257, Percent_Identity=29.9610894941634, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17536985, Length=225, Percent_Identity=27.1111111111111, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17554946, Length=258, Percent_Identity=27.5193798449612, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI19920382, Length=220, Percent_Identity=29.0909090909091, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI20129971, Length=172, Percent_Identity=32.5581395348837, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24653477, Length=172, Percent_Identity=32.5581395348837, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI19922422, Length=265, Percent_Identity=26.7924528301887, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR017602 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.100 [H]
Molecular weight: Translated: 29755; Mature: 29755
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTATPTVPQDAPVRCVSRGAVFQIELNHPEARNPLGPEMIDALDAALTQAIEMPAARVV CCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE LITAAGEAFSAGGNLGNMAERLNAPPGANGKDPIAQGNRRYGDFLRRLCSAPKVVVASVR EEEECCCHHHCCCCHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCEEHHHHC GAAMGGGAGLVCAADIAIGAQGAKFGFPEAAIGLVPGQILPFVAARIGAQAARRLMLTGE CCCCCCCCCEEEEHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC RIDAAEAHRIGLLDYHVADPEQLAARTDELLARIVACAPGASAATKQMLHTVLGAKRWWS CCCHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC DELPGYLDEAADTFARQMRSEAIEGVAAARGKRAPNWQQVIAARD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC >Mature Secondary Structure MDTATPTVPQDAPVRCVSRGAVFQIELNHPEARNPLGPEMIDALDAALTQAIEMPAARVV CCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEE LITAAGEAFSAGGNLGNMAERLNAPPGANGKDPIAQGNRRYGDFLRRLCSAPKVVVASVR EEEECCCHHHCCCCHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCEEHHHHC GAAMGGGAGLVCAADIAIGAQGAKFGFPEAAIGLVPGQILPFVAARIGAQAARRLMLTGE CCCCCCCCCEEEEHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC RIDAAEAHRIGLLDYHVADPEQLAARTDELLARIVACAPGASAATKQMLHTVLGAKRWWS CCCHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC DELPGYLDEAADTFARQMRSEAIEGVAAARGKRAPNWQQVIAARD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9746358; 9738901 [H]