| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611087
Identifier: 121611087
GI number: 121611087
Start: 4588646
End: 4589236
Strand: Direct
Name: 121611087
Synonym: Veis_4171
Alternate gene names: NA
Gene position: 4588646-4589236 (Clockwise)
Preceding gene: 121611086
Following gene: 121611088
Centisome position: 82.43
GC content: 61.59
Gene sequence:
>591_bases ATGCAGGGCCGCATCATCTTTCTGCTCGAAGAGCCTTCCATGCGGGTGCTGCTCGACGATTGGCTGCCGCGCCTGTTCCC CGGCTGGGTGGATGGCCAGCACTTCCAGTGCGTACCCCACGAGGGCAAGAGTGACCTGGACCGCAGCATCCCGCGCAAGC TGGCCGCATGGCGCATCCCCGGCGACCGCTTCGTCATCGTGCGCGACAACGACAACGCCGACTGCATCGACCTGAAGGCC AGGTTACGTGTCCTGTGTGTGCAGAGTGGCCGCCCGGAAACCTTGATCCGTCTGGCCTGCCAGGAACTCGAAAGCTGGTA TCTTGGCGACTTGGCCGCGCTGGCTGCCGCTTTTGACCAGCCCAAGGCAGATACCCCGGCACATCGCAAGCGTTTCGCCC AGCCAGACGATTGGCAAAAGCCTTCTGTGGAAGTCAAACGCCTCGTGCCTGCCTTTCAGAAAAACAGCGGCGCACGCGCC ATGGCCCGGCACCTGCAGCCAGAAAACAACCAATCGAAAAGCCTACAGGTATTCGTTGCAGGCGTGCGCCACATGGCTGC CGGCATGGGCTATCAAGAAGTCTTGAACTGA
Upstream 100 bases:
>100_bases GCAGTTCCGAGAACCTGCGCTCTCTGTTCGATGCCGGCGACCTTCCCGGTTATCTGTGGAAGCAGGGTTTGTTCGAGGGT CTCAACAAGGACGTGAGCTG
Downstream 100 bases:
>100_bases TCAACCATGGCCACCAGAAACCCCAAAGCCCCCCTCGTCGTCGACACCCTCAAACACGAGGGCGCCACGCGCAGGAACAT CCCCACGGCCGAGTACCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MQGRIIFLLEEPSMRVLLDDWLPRLFPGWVDGQHFQCVPHEGKSDLDRSIPRKLAAWRIPGDRFVIVRDNDNADCIDLKA RLRVLCVQSGRPETLIRLACQELESWYLGDLAALAAAFDQPKADTPAHRKRFAQPDDWQKPSVEVKRLVPAFQKNSGARA MARHLQPENNQSKSLQVFVAGVRHMAAGMGYQEVLN
Sequences:
>Translated_196_residues MQGRIIFLLEEPSMRVLLDDWLPRLFPGWVDGQHFQCVPHEGKSDLDRSIPRKLAAWRIPGDRFVIVRDNDNADCIDLKA RLRVLCVQSGRPETLIRLACQELESWYLGDLAALAAAFDQPKADTPAHRKRFAQPDDWQKPSVEVKRLVPAFQKNSGARA MARHLQPENNQSKSLQVFVAGVRHMAAGMGYQEVLN >Mature_196_residues MQGRIIFLLEEPSMRVLLDDWLPRLFPGWVDGQHFQCVPHEGKSDLDRSIPRKLAAWRIPGDRFVIVRDNDNADCIDLKA RLRVLCVQSGRPETLIRLACQELESWYLGDLAALAAAFDQPKADTPAHRKRFAQPDDWQKPSVEVKRLVPAFQKNSGARA MARHLQPENNQSKSLQVFVAGVRHMAAGMGYQEVLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22265; Mature: 22265
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGRIIFLLEEPSMRVLLDDWLPRLFPGWVDGQHFQCVPHEGKSDLDRSIPRKLAAWRIP CCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHEECC GDRFVIVRDNDNADCIDLKARLRVLCVQSGRPETLIRLACQELESWYLGDLAALAAAFDQ CCEEEEEECCCCCCEEHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PKADTPAHRKRFAQPDDWQKPSVEVKRLVPAFQKNSGARAMARHLQPENNQSKSLQVFVA CCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHH GVRHMAAGMGYQEVLN HHHHHHHCCCHHHHCC >Mature Secondary Structure MQGRIIFLLEEPSMRVLLDDWLPRLFPGWVDGQHFQCVPHEGKSDLDRSIPRKLAAWRIP CCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHEECC GDRFVIVRDNDNADCIDLKARLRVLCVQSGRPETLIRLACQELESWYLGDLAALAAAFDQ CCEEEEEECCCCCCEEHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PKADTPAHRKRFAQPDDWQKPSVEVKRLVPAFQKNSGARAMARHLQPENNQSKSLQVFVA CCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHH GVRHMAAGMGYQEVLN HHHHHHHCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA