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The map label for this gene is yngJ [H]

Identifier: 121611022

GI number: 121611022

Start: 4504233

End: 4505390

Strand: Direct

Name: yngJ [H]

Synonym: Veis_4106

Alternate gene names: 121611022

Gene position: 4504233-4505390 (Clockwise)

Preceding gene: 121611021

Following gene: 121611023

Centisome position: 80.91

GC content: 68.13

Gene sequence:

>1158_bases
ATGCCTCCGAACCCCTATGTCGACGAAGACTTGCAGGCGCTGGCCGAGCACGCCCGGCGCTTTGCACGCGGCCGGGTCGC
CCCCGGTTTTCTGGAGCGCGACCAGCATCGCGTGCTCGATCGCGCGCTGCTGCGGGAAATGGGCGCGCTCGGGTTCATCT
GCCCGGAGTTGCCGGAACGACTGGGTGGCCAGGGGCTGGGTTGCCTGGCGGCGGGGGTGATCCACGAGGAGATCGCGCGC
GCCGACCTGAGTTTTTCCTACCTGAACCTGCTGGCCTCCCTGAACGGGCAAATCCTGTCCCGGTACGGTGCGCCCGAGGT
GGCCACGCCCTGGTTGCACAAACTGGCCAGGGGTGAGGCCATCTGCGCGATTGCCTTGACCGAACCGCACGCCGGCTCGG
ACGCCGCCCGGTTGCGTCTGCGCATCGACCGCGATGGCGACTGCTACGTCGTCGATGGCGAAAAGACCTCCATCTCGGCC
GCCGACCAGGCCGACATCGCCGTGGTGTTCGGCCGCACGGGCACGCCCGGGTCGGCCGCCCACGGCGTGACCGCGCTGCT
GGTGCCGATGAACACCCCCGGCATCACGACCCGCCGCTTCGATTGCCATGGACAGCGCGCCATTGGCCGCGGATCCATTT
TTTTCGAGAACGTGCGCATTCCGCTGAATCACCGTCTGGGTGACGAGAACGAGGGCTTCGTTCAGGTCATGCAGGGCTTT
GACTTTTCGCGCTCGCTGATTGGCCTGCAATGCCTGTCCGTCGCGCGCGCGGCGCTCGAAGAGACCTGGCAGTACATCAC
CGGGCGCCAGGCGTTCGGTCAGCCGCTGTCGGCATTCCAGGGCGTGACGCACCCGCTGGCCCGGTACGACACCGAGGTCG
AGGGCGCGCGCCTGTTGTGCCTGCAGGGCCTGTGGCTCAAGGACCAGGGCCTGCCGCACACCGCCGAGGCCGGCATGGCC
AAGTGGTGGGGCCCCAAACTGGCCTACGACGCGATTCACCAATGCCTGCTGTGCCATGGGCATGGCGGCTACGACCGGGG
GCGGATGGAGCAGCGCCTGCGCGACGTGCTGGGCTTCCAGATCGGCGACGGCACCGCCCAGATCATGAAAACCATCATTG
CCCGCACACGCGCCGGCCGCCAGTTCGTGCCCGCCTGA

Upstream 100 bases:

>100_bases
GCAAGAATCGCGCGAAGGCGCCAACGCGCTCAGGGAAAAGCGCAAGCCCGAATTCCGCAAGTACGCCAAGTAAGCCGCGC
AGCGACATTGGAAAAAAACG

Downstream 100 bases:

>100_bases
AACGCATACGGCAAAAAACGAGGAGACAAGGGCCATGGAATTCGACGCCGTACTGATTGCCCCCCGCCGTGCCGCCAGCG
TGGCGCAGGGCCTGTGGCAC

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MPPNPYVDEDLQALAEHARRFARGRVAPGFLERDQHRVLDRALLREMGALGFICPELPERLGGQGLGCLAAGVIHEEIAR
ADLSFSYLNLLASLNGQILSRYGAPEVATPWLHKLARGEAICAIALTEPHAGSDAARLRLRIDRDGDCYVVDGEKTSISA
ADQADIAVVFGRTGTPGSAAHGVTALLVPMNTPGITTRRFDCHGQRAIGRGSIFFENVRIPLNHRLGDENEGFVQVMQGF
DFSRSLIGLQCLSVARAALEETWQYITGRQAFGQPLSAFQGVTHPLARYDTEVEGARLLCLQGLWLKDQGLPHTAEAGMA
KWWGPKLAYDAIHQCLLCHGHGGYDRGRMEQRLRDVLGFQIGDGTAQIMKTIIARTRAGRQFVPA

Sequences:

>Translated_385_residues
MPPNPYVDEDLQALAEHARRFARGRVAPGFLERDQHRVLDRALLREMGALGFICPELPERLGGQGLGCLAAGVIHEEIAR
ADLSFSYLNLLASLNGQILSRYGAPEVATPWLHKLARGEAICAIALTEPHAGSDAARLRLRIDRDGDCYVVDGEKTSISA
ADQADIAVVFGRTGTPGSAAHGVTALLVPMNTPGITTRRFDCHGQRAIGRGSIFFENVRIPLNHRLGDENEGFVQVMQGF
DFSRSLIGLQCLSVARAALEETWQYITGRQAFGQPLSAFQGVTHPLARYDTEVEGARLLCLQGLWLKDQGLPHTAEAGMA
KWWGPKLAYDAIHQCLLCHGHGGYDRGRMEQRLRDVLGFQIGDGTAQIMKTIIARTRAGRQFVPA
>Mature_384_residues
PPNPYVDEDLQALAEHARRFARGRVAPGFLERDQHRVLDRALLREMGALGFICPELPERLGGQGLGCLAAGVIHEEIARA
DLSFSYLNLLASLNGQILSRYGAPEVATPWLHKLARGEAICAIALTEPHAGSDAARLRLRIDRDGDCYVVDGEKTSISAA
DQADIAVVFGRTGTPGSAAHGVTALLVPMNTPGITTRRFDCHGQRAIGRGSIFFENVRIPLNHRLGDENEGFVQVMQGFD
FSRSLIGLQCLSVARAALEETWQYITGRQAFGQPLSAFQGVTHPLARYDTEVEGARLLCLQGLWLKDQGLPHTAEAGMAK
WWGPKLAYDAIHQCLLCHGHGGYDRGRMEQRLRDVLGFQIGDGTAQIMKTIIARTRAGRQFVPA

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=372, Percent_Identity=33.8709677419355, Blast_Score=183, Evalue=3e-46,
Organism=Homo sapiens, GI4501857, Length=365, Percent_Identity=29.3150684931507, Blast_Score=165, Evalue=7e-41,
Organism=Homo sapiens, GI4501859, Length=377, Percent_Identity=28.6472148541114, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI226958412, Length=383, Percent_Identity=29.242819843342, Blast_Score=155, Evalue=5e-38,
Organism=Homo sapiens, GI187960098, Length=379, Percent_Identity=29.287598944591, Blast_Score=155, Evalue=6e-38,
Organism=Homo sapiens, GI4557231, Length=379, Percent_Identity=29.287598944591, Blast_Score=155, Evalue=7e-38,
Organism=Homo sapiens, GI7656849, Length=383, Percent_Identity=28.4595300261097, Blast_Score=152, Evalue=4e-37,
Organism=Homo sapiens, GI226958414, Length=377, Percent_Identity=29.4429708222812, Blast_Score=148, Evalue=7e-36,
Organism=Homo sapiens, GI21361497, Length=373, Percent_Identity=29.4906166219839, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI76496475, Length=346, Percent_Identity=28.9017341040462, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI4557235, Length=346, Percent_Identity=28.9017341040462, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI38505218, Length=250, Percent_Identity=31.6, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI4503943, Length=373, Percent_Identity=26.2734584450402, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI7669494, Length=296, Percent_Identity=28.0405405405405, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI211971008, Length=291, Percent_Identity=27.8350515463918, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI48976061, Length=291, Percent_Identity=27.8350515463918, Blast_Score=88, Evalue=1e-17,
Organism=Escherichia coli, GI87081958, Length=355, Percent_Identity=26.7605633802817, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1786223, Length=349, Percent_Identity=23.2091690544413, Blast_Score=98, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17506239, Length=377, Percent_Identity=29.1777188328912, Blast_Score=169, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17508101, Length=378, Percent_Identity=30.4232804232804, Blast_Score=169, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI17570075, Length=387, Percent_Identity=30.4909560723514, Blast_Score=152, Evalue=4e-37,
Organism=Caenorhabditis elegans, GI17534899, Length=371, Percent_Identity=29.1105121293801, Blast_Score=147, Evalue=7e-36,
Organism=Caenorhabditis elegans, GI17569725, Length=379, Percent_Identity=27.7044854881267, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17538396, Length=378, Percent_Identity=30.4232804232804, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17533517, Length=376, Percent_Identity=27.3936170212766, Blast_Score=138, Evalue=5e-33,
Organism=Caenorhabditis elegans, GI71990804, Length=279, Percent_Identity=31.8996415770609, Blast_Score=138, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI17551932, Length=380, Percent_Identity=27.1052631578947, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17505929, Length=347, Percent_Identity=26.2247838616715, Blast_Score=114, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI71985184, Length=360, Percent_Identity=26.6666666666667, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI71982178, Length=279, Percent_Identity=26.1648745519713, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI32563615, Length=226, Percent_Identity=29.646017699115, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI71985192, Length=309, Percent_Identity=26.8608414239482, Blast_Score=98, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI17562446, Length=314, Percent_Identity=30.5732484076433, Blast_Score=98, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI17534353, Length=385, Percent_Identity=24.9350649350649, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17531909, Length=234, Percent_Identity=27.3504273504274, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI21356377, Length=374, Percent_Identity=32.0855614973262, Blast_Score=174, Evalue=8e-44,
Organism=Drosophila melanogaster, GI24666513, Length=377, Percent_Identity=29.7082228116711, Blast_Score=173, Evalue=1e-43,
Organism=Drosophila melanogaster, GI24646207, Length=370, Percent_Identity=32.7027027027027, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI21355753, Length=376, Percent_Identity=29.2553191489362, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24660351, Length=382, Percent_Identity=30.8900523560209, Blast_Score=142, Evalue=5e-34,
Organism=Drosophila melanogaster, GI281363737, Length=348, Percent_Identity=29.5977011494253, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI19920834, Length=316, Percent_Identity=27.8481012658228, Blast_Score=99, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: 1.3.99.-

Molecular weight: Translated: 42081; Mature: 41949

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPNPYVDEDLQALAEHARRFARGRVAPGFLERDQHRVLDRALLREMGALGFICPELPER
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LGGQGLGCLAAGVIHEEIARADLSFSYLNLLASLNGQILSRYGAPEVATPWLHKLARGEA
HCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHCCCE
ICAIALTEPHAGSDAARLRLRIDRDGDCYVVDGEKTSISAADQADIAVVFGRTGTPGSAA
EEEEEEECCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCC
HGVTALLVPMNTPGITTRRFDCHGQRAIGRGSIFFENVRIPLNHRLGDENEGFVQVMQGF
CCEEEEEEECCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHCC
DFSRSLIGLQCLSVARAALEETWQYITGRQAFGQPLSAFQGVTHPLARYDTEVEGARLLC
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEE
LQGLWLKDQGLPHTAEAGMAKWWGPKLAYDAIHQCLLCHGHGGYDRGRMEQRLRDVLGFQ
ECCCEECCCCCCCHHHCCCHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCEE
IGDGTAQIMKTIIARTRAGRQFVPA
CCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PPNPYVDEDLQALAEHARRFARGRVAPGFLERDQHRVLDRALLREMGALGFICPELPER
CCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
LGGQGLGCLAAGVIHEEIARADLSFSYLNLLASLNGQILSRYGAPEVATPWLHKLARGEA
HCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHCCCE
ICAIALTEPHAGSDAARLRLRIDRDGDCYVVDGEKTSISAADQADIAVVFGRTGTPGSAA
EEEEEEECCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCC
HGVTALLVPMNTPGITTRRFDCHGQRAIGRGSIFFENVRIPLNHRLGDENEGFVQVMQGF
CCEEEEEEECCCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHCC
DFSRSLIGLQCLSVARAALEETWQYITGRQAFGQPLSAFQGVTHPLARYDTEVEGARLLC
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEE
LQGLWLKDQGLPHTAEAGMAKWWGPKLAYDAIHQCLLCHGHGGYDRGRMEQRLRDVLGFQ
ECCCEECCCCCCCHHHCCCHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCEE
IGDGTAQIMKTIIARTRAGRQFVPA
CCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]