Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121610968

Identifier: 121610968

GI number: 121610968

Start: 4442989

End: 4443591

Strand: Direct

Name: 121610968

Synonym: Veis_4052

Alternate gene names: NA

Gene position: 4442989-4443591 (Clockwise)

Preceding gene: 121610967

Following gene: 121610969

Centisome position: 79.81

GC content: 68.33

Gene sequence:

>603_bases
ATGACCCCGCAACTGCCCATTGACGTGGACGCCGACACCGGCGTCTGGACCACCGACGGTCTGCCGATGATTTATGTGCC
ACGGCATTTCTTCGTCAACAACCATGTCGAGACCGAAGCCGTCGTCGGCCGGGCGCTCTATGCCCCGGCGCTGTACAAGG
CCGGGCACCGCTCGGCGTATTTCTGGTGCCAGCAGGAAGCCGCCACCCACGGCCTGGCGGGCATGGCGGTCTGCGAGCAT
TACCTCAAACGCCTGTCGCAACGCGGCTGGGGCCGGTTCTCGCTGCTCAGCGCCGACGCCGGCGCGGGCCGCGCCCGGGT
CAGGGTCGAGCATTCGGTCTTCGTGCTGGCGCAAGGCATTGCCGGCGTTCCGGTGCGGCACGACAAGCTGTGCTATGCCT
TCGCGGGCTGGTTCTCGGGCGCGATGGACTGGGTGCTGGAGTCCGGCGGCTCGGCCGTGCGCACCACCTGCGCCGAGGAT
CGATGCGCCGCGCAAGCGCCTGCCGCAGACGCTGCCGCAGCAGACGCCGCGCCGCGCGATTGCATCTTCGACGTGCACCC
ACTGGAAGAAGGGCCGCGCCATGCAGTACCCGCATCTGTTTGA

Upstream 100 bases:

>100_bases
GGTCGACAAGTGGATCGCCGACAACCCGGCGCGCGTAGCCTCCTGGCTCGACCCGGCGAACTGAAAACCCGTCCACCCCT
TGGCCAGCGAGACCCATCCG

Downstream 100 bases:

>100_bases
GCCGATCCGCCTGAACCAGGTGCTGCTGCGCAACCGCATCGTCAGCACCGCCCATGCCGAGGTCTATGGCCAAGGCGGCG
CGCCGAGCGCGCGCTACATC

Product: V4R domain-containing protein

Products: NA

Alternate protein names: V4R Domain-Containing Protein

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MTPQLPIDVDADTGVWTTDGLPMIYVPRHFFVNNHVETEAVVGRALYAPALYKAGHRSAYFWCQQEAATHGLAGMAVCEH
YLKRLSQRGWGRFSLLSADAGAGRARVRVEHSVFVLAQGIAGVPVRHDKLCYAFAGWFSGAMDWVLESGGSAVRTTCAED
RCAAQAPAADAAAADAAPRDCIFDVHPLEEGPRHAVPASV

Sequences:

>Translated_200_residues
MTPQLPIDVDADTGVWTTDGLPMIYVPRHFFVNNHVETEAVVGRALYAPALYKAGHRSAYFWCQQEAATHGLAGMAVCEH
YLKRLSQRGWGRFSLLSADAGAGRARVRVEHSVFVLAQGIAGVPVRHDKLCYAFAGWFSGAMDWVLESGGSAVRTTCAED
RCAAQAPAADAAAADAAPRDCIFDVHPLEEGPRHAVPASV
>Mature_199_residues
TPQLPIDVDADTGVWTTDGLPMIYVPRHFFVNNHVETEAVVGRALYAPALYKAGHRSAYFWCQQEAATHGLAGMAVCEHY
LKRLSQRGWGRFSLLSADAGAGRARVRVEHSVFVLAQGIAGVPVRHDKLCYAFAGWFSGAMDWVLESGGSAVRTTCAEDR
CAAQAPAADAAAADAAPRDCIFDVHPLEEGPRHAVPASV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21520; Mature: 21389

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPQLPIDVDADTGVWTTDGLPMIYVPRHFFVNNHVETEAVVGRALYAPALYKAGHRSAY
CCCCCCCEECCCCCEEECCCCCEEEECCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEE
FWCQQEAATHGLAGMAVCEHYLKRLSQRGWGRFSLLSADAGAGRARVRVEHSVFVLAQGI
EEECCHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECEEEEEECCC
AGVPVRHDKLCYAFAGWFSGAMDWVLESGGSAVRTTCAEDRCAAQAPAADAAAADAAPRD
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHCCCCCCC
CIFDVHPLEEGPRHAVPASV
CEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TPQLPIDVDADTGVWTTDGLPMIYVPRHFFVNNHVETEAVVGRALYAPALYKAGHRSAY
CCCCCCEECCCCCEEECCCCCEEEECCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEE
FWCQQEAATHGLAGMAVCEHYLKRLSQRGWGRFSLLSADAGAGRARVRVEHSVFVLAQGI
EEECCHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECEEEEEECCC
AGVPVRHDKLCYAFAGWFSGAMDWVLESGGSAVRTTCAEDRCAAQAPAADAAAADAAPRD
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHCCCCCCC
CIFDVHPLEEGPRHAVPASV
CEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA