| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is paaA [H]
Identifier: 121610863
GI number: 121610863
Start: 4330780
End: 4331790
Strand: Direct
Name: paaA [H]
Synonym: Veis_3945
Alternate gene names: 121610863
Gene position: 4330780-4331790 (Clockwise)
Preceding gene: 121610862
Following gene: 121610864
Centisome position: 77.8
GC content: 69.04
Gene sequence:
>1011_bases ATGTACACCCAAGCGATGGACCTGATGGATCAGATGGCGCCGGGCGATGCCGGCGACGCCCGGCAGATGCAGCGCCAGGA GCAGTTCGAGGCGCGCATCGCTGCCGGCGAGTTCATCGAGGCCAAGGACTGGATGCCCGAGCATTACCGCCAGACCCTGC TGCGCCAGATCAGCCAGCATGCGCACTCGGAAATCGTGGGCATGCTGCCCGAGGGCAACTGGATCACGCGCGCGCCCACG CTCAAGCGCAAGGCCATCTTGCTGGCCAAGGTGCAGGACGAGGGCGGGCATGGCCTGTACCTGTATGCGGCGGCCGAGAC CCTGGGCAGTTCGCGCGCGCAGATGCTGGCCGCGCTGCACAGCGGCCGCGCCAAGTACAGCTCGATCTTCAACTACCCGA CGCTGACCTGGGCCGACATGGGCACCATTGGCTGGCTGGTGGACGGCGCGGCGATCATGAACCAGGTGCCGCTGTGCCGC TGCTCATACGCGCCGTATGCGCGCGCCATGGTGCGCATCTGCCGCGAAGAGAGCTTTCACCAGCGCCAGGGCTACGACGC GCTGCTGACCATGATGCGCCAGGGCAGCGACGCGCAGCGCGCGATGGTGCAGGACGCCGTCGAGCGCTGGTGGTGGCCGT CGCTGATGATGTTCGGCCCGCCGGACGAGCAGTCGCCCCATTCCGCGCAATCGATGCGCTGGGGCATCAAGCGCGTCTCC AACGACCGCCTGCGCCAGCAGTTCATCGACGCCACGGTGGCGCAGGCCCGGGTGCTGGGCGTCACGCTGCCCGACCCCGA CCTGCGCTGGAATCCGCAGCGCCAGCAGCATGACCACGGCGCGATCGACTGGAGCGAGTTCTGGCGCGTGATCTCCGGCG ATGGCCCCTGCAACCAGGAGCGCCTGGGCGCGCGCGTCCAGGCCTGGGACGACGGCGCCTGGGTGCGCGCAGCCGCCCTG GCCCATGCCGCCAAACATTCCCCGGCACCAGCCCAACGGGAGACACCATGA
Upstream 100 bases:
>100_bases GCTGCCAACGCCATCGAGCGCACGCTGGTGGGCAAGGCCCGGCGCGTCATCGACCAGCGCCCGCGTTGATGGATCGATGC CCGATACGAAAGGCTCTCCG
Downstream 100 bases:
>100_bases CCCCCCCTGCCCCATCTGCCGCCCCTGCCGCCCCTGCCCCCTCTGCCGCCGGCCCCGCAGCCGACCCTGCCACGGCCGCC GGATCTGCCGAAGTCATCGA
Product: phenylacetate-CoA oxygenase subunit PaaA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MYTQAMDLMDQMAPGDAGDARQMQRQEQFEARIAAGEFIEAKDWMPEHYRQTLLRQISQHAHSEIVGMLPEGNWITRAPT LKRKAILLAKVQDEGGHGLYLYAAAETLGSSRAQMLAALHSGRAKYSSIFNYPTLTWADMGTIGWLVDGAAIMNQVPLCR CSYAPYARAMVRICREESFHQRQGYDALLTMMRQGSDAQRAMVQDAVERWWWPSLMMFGPPDEQSPHSAQSMRWGIKRVS NDRLRQQFIDATVAQARVLGVTLPDPDLRWNPQRQQHDHGAIDWSEFWRVISGDGPCNQERLGARVQAWDDGAWVRAAAL AHAAKHSPAPAQRETP
Sequences:
>Translated_336_residues MYTQAMDLMDQMAPGDAGDARQMQRQEQFEARIAAGEFIEAKDWMPEHYRQTLLRQISQHAHSEIVGMLPEGNWITRAPT LKRKAILLAKVQDEGGHGLYLYAAAETLGSSRAQMLAALHSGRAKYSSIFNYPTLTWADMGTIGWLVDGAAIMNQVPLCR CSYAPYARAMVRICREESFHQRQGYDALLTMMRQGSDAQRAMVQDAVERWWWPSLMMFGPPDEQSPHSAQSMRWGIKRVS NDRLRQQFIDATVAQARVLGVTLPDPDLRWNPQRQQHDHGAIDWSEFWRVISGDGPCNQERLGARVQAWDDGAWVRAAAL AHAAKHSPAPAQRETP >Mature_336_residues MYTQAMDLMDQMAPGDAGDARQMQRQEQFEARIAAGEFIEAKDWMPEHYRQTLLRQISQHAHSEIVGMLPEGNWITRAPT LKRKAILLAKVQDEGGHGLYLYAAAETLGSSRAQMLAALHSGRAKYSSIFNYPTLTWADMGTIGWLVDGAAIMNQVPLCR CSYAPYARAMVRICREESFHQRQGYDALLTMMRQGSDAQRAMVQDAVERWWWPSLMMFGPPDEQSPHSAQSMRWGIKRVS NDRLRQQFIDATVAQARVLGVTLPDPDLRWNPQRQQHDHGAIDWSEFWRVISGDGPCNQERLGARVQAWDDGAWVRAAAL AHAAKHSPAPAQRETP
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3396
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787654, Length=304, Percent_Identity=65.7894736842105, Blast_Score=431, Evalue=1e-122,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR011881 - InterPro: IPR007814 [H]
Pfam domain/function: PF05138 PaaA_PaaC [H]
EC number: NA
Molecular weight: Translated: 37998; Mature: 37998
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTQAMDLMDQMAPGDAGDARQMQRQEQFEARIAAGEFIEAKDWMPEHYRQTLLRQISQH CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHH AHSEIVGMLPEGNWITRAPTLKRKAILLAKVQDEGGHGLYLYAAAETLGSSRAQMLAALH HHHHHEEECCCCCEEECCCCHHHHEEEEEEEECCCCCEEEEEEEHHHHCHHHHHHHHHHH SGRAKYSSIFNYPTLTWADMGTIGWLVDGAAIMNQVPLCRCSYAPYARAMVRICREESFH HCCHHHHHHHCCCCEEHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH QRQGYDALLTMMRQGSDAQRAMVQDAVERWWWPSLMMFGPPDEQSPHSAQSMRWGIKRVS HHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHH NDRLRQQFIDATVAQARVLGVTLPDPDLRWNPQRQQHDHGAIDWSEFWRVISGDGPCNQE HHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCHH RLGARVQAWDDGAWVRAAALAHAAKHSPAPAQRETP HHCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MYTQAMDLMDQMAPGDAGDARQMQRQEQFEARIAAGEFIEAKDWMPEHYRQTLLRQISQH CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHH AHSEIVGMLPEGNWITRAPTLKRKAILLAKVQDEGGHGLYLYAAAETLGSSRAQMLAALH HHHHHEEECCCCCEEECCCCHHHHEEEEEEEECCCCCEEEEEEEHHHHCHHHHHHHHHHH SGRAKYSSIFNYPTLTWADMGTIGWLVDGAAIMNQVPLCRCSYAPYARAMVRICREESFH HCCHHHHHHHCCCCEEHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH QRQGYDALLTMMRQGSDAQRAMVQDAVERWWWPSLMMFGPPDEQSPHSAQSMRWGIKRVS HHCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHH NDRLRQQFIDATVAQARVLGVTLPDPDLRWNPQRQQHDHGAIDWSEFWRVISGDGPCNQE HHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCHH RLGARVQAWDDGAWVRAAALAHAAKHSPAPAQRETP HHCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]