| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610848
Identifier: 121610848
GI number: 121610848
Start: 4318859
End: 4319158
Strand: Direct
Name: 121610848
Synonym: Veis_3930
Alternate gene names: NA
Gene position: 4318859-4319158 (Clockwise)
Preceding gene: 121610842
Following gene: 121610857
Centisome position: 77.58
GC content: 66.33
Gene sequence:
>300_bases ATGCTGCGCCGCCACCATGCCATCACCTTGCAGCAGGCCAGCGAGGAATCCCCTGCGCTGGCCAGGCTCACCGCGCTGAC ACGCGAGTCCAGTGAGCGGCTCAAGGCCATTCAGACCCTGATTCCTGCGCCGCTGCGCCCGGCCGTCGCGGCCGGCCCCA TCGATGGGAGCAACTGGTGCCTGCTGGTCAGGAGTAACGCCGCCGCCGCAAAGATACGCCAATTGCTGCCCGCTTTGCAG GCGCATCTGCGCAGCCGGGGCTGGGAGGTTAGCGCGATTCGGCTCAAAGTCCAAAACTGA
Upstream 100 bases:
>100_bases CAAGCGCGTGCCGGACAAATGAATGGCCCGGCTACGCGCCAGCCTGGCGTCCGTGATAATCAACTGCACTACGAATTCTC CACGCCCGAAAACGCCCACC
Downstream 100 bases:
>100_bases TTCCAAGCCTGAATCATCCGTGCACCTCGTCGGCGGCGCTGGCCGTACACCCGTACTGTCTGCGCTTCGCCTTCGCGAAC GATTGGGGAATGGAATGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MLRRHHAITLQQASEESPALARLTALTRESSERLKAIQTLIPAPLRPAVAAGPIDGSNWCLLVRSNAAAAKIRQLLPALQ AHLRSRGWEVSAIRLKVQN
Sequences:
>Translated_99_residues MLRRHHAITLQQASEESPALARLTALTRESSERLKAIQTLIPAPLRPAVAAGPIDGSNWCLLVRSNAAAAKIRQLLPALQ AHLRSRGWEVSAIRLKVQN >Mature_99_residues MLRRHHAITLQQASEESPALARLTALTRESSERLKAIQTLIPAPLRPAVAAGPIDGSNWCLLVRSNAAAAKIRQLLPALQ AHLRSRGWEVSAIRLKVQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10847; Mature: 10847
Theoretical pI: Translated: 12.10; Mature: 12.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRHHAITLQQASEESPALARLTALTRESSERLKAIQTLIPAPLRPAVAAGPIDGSNWC CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE LLVRSNAAAAKIRQLLPALQAHLRSRGWEVSAIRLKVQN EEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC >Mature Secondary Structure MLRRHHAITLQQASEESPALARLTALTRESSERLKAIQTLIPAPLRPAVAAGPIDGSNWC CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE LLVRSNAAAAKIRQLLPALQAHLRSRGWEVSAIRLKVQN EEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA