Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121610792

Identifier: 121610792

GI number: 121610792

Start: 4268338

End: 4269348

Strand: Direct

Name: 121610792

Synonym: Veis_3873

Alternate gene names: NA

Gene position: 4268338-4269348 (Clockwise)

Preceding gene: 121610791

Following gene: 121610793

Centisome position: 76.68

GC content: 67.26

Gene sequence:

>1011_bases
ATGATCCATACACGGCTCACAGATCTGTTCGGCATCCGGCTACCCGTGTTGGGCGGCGGCATGATGTGGCTATCGGACGC
ACACTACGTGGCTGCGCTGGCGCGGGCGGGCGCGCTCGGTTTCATCACACCGCGCTCCTACGAGAGCCTAGATACCCTGC
ACGAAGCCCTGCGCACCTGCCGCCATGCCAGCGAAGGCCATCCGTTCGGCCTCAACATCACGCAGTCGCGCCGCAGTGAA
GAAAACCGGATGATCCCGGCCTGGATCGACATGGCCCTGGAAGAAGGCGTGCGCAGCTTCGAGACCGTGGGCCCTGCTTC
GAGGGCCCTGTTCGAGCGCATGCAAAACGGCGGCGGTCGCGTCATCCACAAGTGCGCCTTCATCGCGCACGCGCTCAAGG
CGCAGGACGAGGGTGCCGATGCCGTGGCGCTGGTCGGCGGCGAAGCCGGGGGCCACCCGGGCACCAACGAACTTCCAACC
TTCGTCCTCGGCGCGCTGGCGCTGGAATCGCAACGCCTGCACATCCCGCTGGCCATCGGCGGCGGCATTGGCAGCGGCCG
GCAGATCGCGGCGGCCCTGGCCCTGGGCGCCGACGCGGTGGTCATGGGCACACGGTTGCTGGTCTGCGAAGAAATCTGGG
CGCATGAGGACTACAAGCGGCATTTGCTGGCCCAGCCGGCGGAAGCCTCGATCCTGGCGCTGACGCGCACCGGCAACCCC
TGGCGCGTGCTCGACAACGCCACGGTGCAGCGGACCCGCGAGCTGGAAGCGCAGGGCGCTACCAGCTATCCCGAATTCGG
CGCGCTGGCAACCGGCCGGCTCGGCCGTGATAACGCCTATCTGCGCGGCGACTGGAACACCGGCCTGCTGTCCATGGGGC
CGGCCATCGGCTTCGCCCATCACATCGAACCCGTACAAGCTGTGTTGCGCCGTTTGATGGCCGAAACCAGCATGCGTGTG
GCTGACGTGCACGCACGCGAACTTCCCCTCTCCACCCTCCATCCCGCATGA

Upstream 100 bases:

>100_bases
ACGTCTCCGGCATGGTGTGCCTGCTGGCATCAGATCGCGCGGCCTTCGTGACCGGCCAGAGCATAGGCATCAGCGGCGGC
TTCGTGATGCAGTGAGCGCC

Downstream 100 bases:

>100_bases
ACCCCAACCTCTTGATCTACAACGGCGGCCTGATACTGCCAGGCACCCAGTTGCAGGCACAGGCCGACCGCGCCGCCGCC
GGCTTTGAACAGCTTGGACT

Product: 2-nitropropane dioxygenase

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MIHTRLTDLFGIRLPVLGGGMMWLSDAHYVAALARAGALGFITPRSYESLDTLHEALRTCRHASEGHPFGLNITQSRRSE
ENRMIPAWIDMALEEGVRSFETVGPASRALFERMQNGGGRVIHKCAFIAHALKAQDEGADAVALVGGEAGGHPGTNELPT
FVLGALALESQRLHIPLAIGGGIGSGRQIAAALALGADAVVMGTRLLVCEEIWAHEDYKRHLLAQPAEASILALTRTGNP
WRVLDNATVQRTRELEAQGATSYPEFGALATGRLGRDNAYLRGDWNTGLLSMGPAIGFAHHIEPVQAVLRRLMAETSMRV
ADVHARELPLSTLHPA

Sequences:

>Translated_336_residues
MIHTRLTDLFGIRLPVLGGGMMWLSDAHYVAALARAGALGFITPRSYESLDTLHEALRTCRHASEGHPFGLNITQSRRSE
ENRMIPAWIDMALEEGVRSFETVGPASRALFERMQNGGGRVIHKCAFIAHALKAQDEGADAVALVGGEAGGHPGTNELPT
FVLGALALESQRLHIPLAIGGGIGSGRQIAAALALGADAVVMGTRLLVCEEIWAHEDYKRHLLAQPAEASILALTRTGNP
WRVLDNATVQRTRELEAQGATSYPEFGALATGRLGRDNAYLRGDWNTGLLSMGPAIGFAHHIEPVQAVLRRLMAETSMRV
ADVHARELPLSTLHPA
>Mature_336_residues
MIHTRLTDLFGIRLPVLGGGMMWLSDAHYVAALARAGALGFITPRSYESLDTLHEALRTCRHASEGHPFGLNITQSRRSE
ENRMIPAWIDMALEEGVRSFETVGPASRALFERMQNGGGRVIHKCAFIAHALKAQDEGADAVALVGGEAGGHPGTNELPT
FVLGALALESQRLHIPLAIGGGIGSGRQIAAALALGADAVVMGTRLLVCEEIWAHEDYKRHLLAQPAEASILALTRTGNP
WRVLDNATVQRTRELEAQGATSYPEFGALATGRLGRDNAYLRGDWNTGLLSMGPAIGFAHHIEPVQAVLRRLMAETSMRV
ADVHARELPLSTLHPA

Specific function: Catalyzes the oxidative denitrification of nitronates to their corresponding aldehydes and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 36157; Mature: 36157

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHTRLTDLFGIRLPVLGGGMMWLSDAHYVAALARAGALGFITPRSYESLDTLHEALRTC
CCCCHHHHHHHCCHHHHCCCCCEECCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHH
RHASEGHPFGLNITQSRRSEENRMIPAWIDMALEEGVRSFETVGPASRALFERMQNGGGR
HCCCCCCCCCCEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCH
VIHKCAFIAHALKAQDEGADAVALVGGEAGGHPGTNELPTFVLGALALESQRLHIPLAIG
HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEE
GGIGSGRQIAAALALGADAVVMGTRLLVCEEIWAHEDYKRHLLAQPAEASILALTRTGNP
CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEECCCC
WRVLDNATVQRTRELEAQGATSYPEFGALATGRLGRDNAYLRGDWNTGLLSMGPAIGFAH
EEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHH
HIEPVQAVLRRLMAETSMRVADVHARELPLSTLHPA
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MIHTRLTDLFGIRLPVLGGGMMWLSDAHYVAALARAGALGFITPRSYESLDTLHEALRTC
CCCCHHHHHHHCCHHHHCCCCCEECCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHH
RHASEGHPFGLNITQSRRSEENRMIPAWIDMALEEGVRSFETVGPASRALFERMQNGGGR
HCCCCCCCCCCEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCH
VIHKCAFIAHALKAQDEGADAVALVGGEAGGHPGTNELPTFVLGALALESQRLHIPLAIG
HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEE
GGIGSGRQIAAALALGADAVVMGTRLLVCEEIWAHEDYKRHLLAQPAEASILALTRTGNP
CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEECCCC
WRVLDNATVQRTRELEAQGATSYPEFGALATGRLGRDNAYLRGDWNTGLLSMGPAIGFAH
EEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHH
HIEPVQAVLRRLMAETSMRVADVHARELPLSTLHPA
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]