| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610792
Identifier: 121610792
GI number: 121610792
Start: 4268338
End: 4269348
Strand: Direct
Name: 121610792
Synonym: Veis_3873
Alternate gene names: NA
Gene position: 4268338-4269348 (Clockwise)
Preceding gene: 121610791
Following gene: 121610793
Centisome position: 76.68
GC content: 67.26
Gene sequence:
>1011_bases ATGATCCATACACGGCTCACAGATCTGTTCGGCATCCGGCTACCCGTGTTGGGCGGCGGCATGATGTGGCTATCGGACGC ACACTACGTGGCTGCGCTGGCGCGGGCGGGCGCGCTCGGTTTCATCACACCGCGCTCCTACGAGAGCCTAGATACCCTGC ACGAAGCCCTGCGCACCTGCCGCCATGCCAGCGAAGGCCATCCGTTCGGCCTCAACATCACGCAGTCGCGCCGCAGTGAA GAAAACCGGATGATCCCGGCCTGGATCGACATGGCCCTGGAAGAAGGCGTGCGCAGCTTCGAGACCGTGGGCCCTGCTTC GAGGGCCCTGTTCGAGCGCATGCAAAACGGCGGCGGTCGCGTCATCCACAAGTGCGCCTTCATCGCGCACGCGCTCAAGG CGCAGGACGAGGGTGCCGATGCCGTGGCGCTGGTCGGCGGCGAAGCCGGGGGCCACCCGGGCACCAACGAACTTCCAACC TTCGTCCTCGGCGCGCTGGCGCTGGAATCGCAACGCCTGCACATCCCGCTGGCCATCGGCGGCGGCATTGGCAGCGGCCG GCAGATCGCGGCGGCCCTGGCCCTGGGCGCCGACGCGGTGGTCATGGGCACACGGTTGCTGGTCTGCGAAGAAATCTGGG CGCATGAGGACTACAAGCGGCATTTGCTGGCCCAGCCGGCGGAAGCCTCGATCCTGGCGCTGACGCGCACCGGCAACCCC TGGCGCGTGCTCGACAACGCCACGGTGCAGCGGACCCGCGAGCTGGAAGCGCAGGGCGCTACCAGCTATCCCGAATTCGG CGCGCTGGCAACCGGCCGGCTCGGCCGTGATAACGCCTATCTGCGCGGCGACTGGAACACCGGCCTGCTGTCCATGGGGC CGGCCATCGGCTTCGCCCATCACATCGAACCCGTACAAGCTGTGTTGCGCCGTTTGATGGCCGAAACCAGCATGCGTGTG GCTGACGTGCACGCACGCGAACTTCCCCTCTCCACCCTCCATCCCGCATGA
Upstream 100 bases:
>100_bases ACGTCTCCGGCATGGTGTGCCTGCTGGCATCAGATCGCGCGGCCTTCGTGACCGGCCAGAGCATAGGCATCAGCGGCGGC TTCGTGATGCAGTGAGCGCC
Downstream 100 bases:
>100_bases ACCCCAACCTCTTGATCTACAACGGCGGCCTGATACTGCCAGGCACCCAGTTGCAGGCACAGGCCGACCGCGCCGCCGCC GGCTTTGAACAGCTTGGACT
Product: 2-nitropropane dioxygenase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MIHTRLTDLFGIRLPVLGGGMMWLSDAHYVAALARAGALGFITPRSYESLDTLHEALRTCRHASEGHPFGLNITQSRRSE ENRMIPAWIDMALEEGVRSFETVGPASRALFERMQNGGGRVIHKCAFIAHALKAQDEGADAVALVGGEAGGHPGTNELPT FVLGALALESQRLHIPLAIGGGIGSGRQIAAALALGADAVVMGTRLLVCEEIWAHEDYKRHLLAQPAEASILALTRTGNP WRVLDNATVQRTRELEAQGATSYPEFGALATGRLGRDNAYLRGDWNTGLLSMGPAIGFAHHIEPVQAVLRRLMAETSMRV ADVHARELPLSTLHPA
Sequences:
>Translated_336_residues MIHTRLTDLFGIRLPVLGGGMMWLSDAHYVAALARAGALGFITPRSYESLDTLHEALRTCRHASEGHPFGLNITQSRRSE ENRMIPAWIDMALEEGVRSFETVGPASRALFERMQNGGGRVIHKCAFIAHALKAQDEGADAVALVGGEAGGHPGTNELPT FVLGALALESQRLHIPLAIGGGIGSGRQIAAALALGADAVVMGTRLLVCEEIWAHEDYKRHLLAQPAEASILALTRTGNP WRVLDNATVQRTRELEAQGATSYPEFGALATGRLGRDNAYLRGDWNTGLLSMGPAIGFAHHIEPVQAVLRRLMAETSMRV ADVHARELPLSTLHPA >Mature_336_residues MIHTRLTDLFGIRLPVLGGGMMWLSDAHYVAALARAGALGFITPRSYESLDTLHEALRTCRHASEGHPFGLNITQSRRSE ENRMIPAWIDMALEEGVRSFETVGPASRALFERMQNGGGRVIHKCAFIAHALKAQDEGADAVALVGGEAGGHPGTNELPT FVLGALALESQRLHIPLAIGGGIGSGRQIAAALALGADAVVMGTRLLVCEEIWAHEDYKRHLLAQPAEASILALTRTGNP WRVLDNATVQRTRELEAQGATSYPEFGALATGRLGRDNAYLRGDWNTGLLSMGPAIGFAHHIEPVQAVLRRLMAETSMRV ADVHARELPLSTLHPA
Specific function: Catalyzes the oxidative denitrification of nitronates to their corresponding aldehydes and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 36157; Mature: 36157
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHTRLTDLFGIRLPVLGGGMMWLSDAHYVAALARAGALGFITPRSYESLDTLHEALRTC CCCCHHHHHHHCCHHHHCCCCCEECCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHH RHASEGHPFGLNITQSRRSEENRMIPAWIDMALEEGVRSFETVGPASRALFERMQNGGGR HCCCCCCCCCCEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCH VIHKCAFIAHALKAQDEGADAVALVGGEAGGHPGTNELPTFVLGALALESQRLHIPLAIG HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEE GGIGSGRQIAAALALGADAVVMGTRLLVCEEIWAHEDYKRHLLAQPAEASILALTRTGNP CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEECCCC WRVLDNATVQRTRELEAQGATSYPEFGALATGRLGRDNAYLRGDWNTGLLSMGPAIGFAH EEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHH HIEPVQAVLRRLMAETSMRVADVHARELPLSTLHPA HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHCCCC >Mature Secondary Structure MIHTRLTDLFGIRLPVLGGGMMWLSDAHYVAALARAGALGFITPRSYESLDTLHEALRTC CCCCHHHHHHHCCHHHHCCCCCEECCHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHH RHASEGHPFGLNITQSRRSEENRMIPAWIDMALEEGVRSFETVGPASRALFERMQNGGGR HCCCCCCCCCCEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCH VIHKCAFIAHALKAQDEGADAVALVGGEAGGHPGTNELPTFVLGALALESQRLHIPLAIG HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEE GGIGSGRQIAAALALGADAVVMGTRLLVCEEIWAHEDYKRHLLAQPAEASILALTRTGNP CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEEECCCC WRVLDNATVQRTRELEAQGATSYPEFGALATGRLGRDNAYLRGDWNTGLLSMGPAIGFAH EEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCCCHHHHHH HIEPVQAVLRRLMAETSMRVADVHARELPLSTLHPA HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]