| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610766
Identifier: 121610766
GI number: 121610766
Start: 4242933
End: 4244060
Strand: Direct
Name: 121610766
Synonym: Veis_3846
Alternate gene names: NA
Gene position: 4242933-4244060 (Clockwise)
Preceding gene: 121610764
Following gene: 121610776
Centisome position: 76.22
GC content: 62.06
Gene sequence:
>1128_bases ATGAATCTACAGTATCGAGTCGAACTTGAGCCGTCCGAGCAAGAAATGCTTGCCACCTTGCTGGGCGCAGGCAAGCATGC GGCCCGCACGCTCAAGCGAGCACAAATTCTGCTGGCTGCTCACGCTGGCCGCGATGACGCGAGCATTGCCGCTACCGTGG CGGTGGGTGAATCCACGGTGTACCGTACCAAGCGCCGCTTCGTGGAGCTGGGCCTGGAGGCTGCGCTTGCCGAGCAGGCT CGGGCTGGAGCGCAGCGCAAGCTCAGCGGCAAAGAGCAGGCCCTGCTGATTGCCACGGCCTGCGCCAATCCGCCAGCCGG GCGTGCGCGCTGGACGCTGGAATTGCTGGCCGATGAGTTCGTGAAGCTGACCGAGCACGAAGCACTATCGTGCGAGACGG TACGCAGGCGCCTGGCCGAGAATGATCTGAAGCCTTGGCGCAAGGACATGTGGTGCATCCCCAAGGTTGACGCTGAATAC GTGGCGCGCATGGAGGACGTGCTCGACTTGTATGCCCAAGACCCCGACCCGCAGCAGCCGGTGGTGTGTTTCGATGAAAG CCCGACCCAGCTCATTGGTGAGGTGCGCCAGCCGATCCCGGCCGAGCCGGGCCAGCCCTTGCGCTATGACTACGAATACA AGCGCAACGGCACCGCCAATCTGTTTGTCTTCCTCGATGCGCATCGCAGCTGGCGCAGGGTCAAAGTCACCGAGCGGCGC ATGGCCCAGGACTTTGCCCAGTGCATGCGTGATCTGGTGGACATCCACTACCCGCAGGCCGAGCGCATCCGCCTCGTGCT GGACAACCTGTCAACGCACACGGCTGCTGCGCTGTACCAATCCATGCCACCACAAGAGGCACGCCGCATCCTGCAGCGCA TTGAGTTCCACTACACCCCCAAGCACGCCAGTTGGTTGAACATGGTGGAGATCGAGATCGGTGTGCTGCGGCGCCAGTGT CTGGATCGCCGCATTGATTGCCGTGAGCGGCTCATTGCTGAGATTGAGGCGTGGGAGCATCTGCGAAATGCCAGCGGTGC TCGCATCCACTGGATGTTCTCTACGGACAAGGCCAGGCAAAAGCTAGCCAAGGCCTATCCGGTACCAGCTTGCGGCAAAC CGTCATAA
Upstream 100 bases:
>100_bases CCTGAACGTGGCTCAGACAACGCCATCGATTTTTGATCCATTTGTTGATCCATTCTTGACTCCAGCGATCAAAGGAGGCT CCTTGAAGGAAGCCATCCGA
Downstream 100 bases:
>100_bases CCTCTGTGCAGAGGTACTAGATGCAACCCCAATGGCAGGTTGTGGATGAACCGACTACGTGTACGCTTCGGCACAATAGT TTCTATTCTCCGGAGCCGGA
Product: transposase
Products: NA
Alternate protein names: Integrase Catalytic Region; ISRSO5-Transposase Protein; Feruloyl Esterase; ISMsm2 Transposase; Transposase And Inactivated Derivatives; Integrase Catalytic Subunit; ISMsm5 Transposase; Isrso5-Transposase Protein; Transposase For Insertion Sequence Element; Inactivated Transposase; Aminoglycoside Phosphotransferase; ISPsy25 Transposase; ISBmu8 Transposase; Transposase Of; ISPsy1 Transposase
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MNLQYRVELEPSEQEMLATLLGAGKHAARTLKRAQILLAAHAGRDDASIAATVAVGESTVYRTKRRFVELGLEAALAEQA RAGAQRKLSGKEQALLIATACANPPAGRARWTLELLADEFVKLTEHEALSCETVRRRLAENDLKPWRKDMWCIPKVDAEY VARMEDVLDLYAQDPDPQQPVVCFDESPTQLIGEVRQPIPAEPGQPLRYDYEYKRNGTANLFVFLDAHRSWRRVKVTERR MAQDFAQCMRDLVDIHYPQAERIRLVLDNLSTHTAAALYQSMPPQEARRILQRIEFHYTPKHASWLNMVEIEIGVLRRQC LDRRIDCRERLIAEIEAWEHLRNASGARIHWMFSTDKARQKLAKAYPVPACGKPS
Sequences:
>Translated_375_residues MNLQYRVELEPSEQEMLATLLGAGKHAARTLKRAQILLAAHAGRDDASIAATVAVGESTVYRTKRRFVELGLEAALAEQA RAGAQRKLSGKEQALLIATACANPPAGRARWTLELLADEFVKLTEHEALSCETVRRRLAENDLKPWRKDMWCIPKVDAEY VARMEDVLDLYAQDPDPQQPVVCFDESPTQLIGEVRQPIPAEPGQPLRYDYEYKRNGTANLFVFLDAHRSWRRVKVTERR MAQDFAQCMRDLVDIHYPQAERIRLVLDNLSTHTAAALYQSMPPQEARRILQRIEFHYTPKHASWLNMVEIEIGVLRRQC LDRRIDCRERLIAEIEAWEHLRNASGARIHWMFSTDKARQKLAKAYPVPACGKPS >Mature_375_residues MNLQYRVELEPSEQEMLATLLGAGKHAARTLKRAQILLAAHAGRDDASIAATVAVGESTVYRTKRRFVELGLEAALAEQA RAGAQRKLSGKEQALLIATACANPPAGRARWTLELLADEFVKLTEHEALSCETVRRRLAENDLKPWRKDMWCIPKVDAEY VARMEDVLDLYAQDPDPQQPVVCFDESPTQLIGEVRQPIPAEPGQPLRYDYEYKRNGTANLFVFLDAHRSWRRVKVTERR MAQDFAQCMRDLVDIHYPQAERIRLVLDNLSTHTAAALYQSMPPQEARRILQRIEFHYTPKHASWLNMVEIEIGVLRRQC LDRRIDCRERLIAEIEAWEHLRNASGARIHWMFSTDKARQKLAKAYPVPACGKPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42873; Mature: 42873
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLQYRVELEPSEQEMLATLLGAGKHAARTLKRAQILLAAHAGRDDASIAATVAVGESTV CCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCCCEEEEEEECCHHH YRTKRRFVELGLEAALAEQARAGAQRKLSGKEQALLIATACANPPAGRARWTLELLADEF HHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH VKLTEHEALSCETVRRRLAENDLKPWRKDMWCIPKVDAEYVARMEDVLDLYAQDPDPQQP HHHHHCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC VVCFDESPTQLIGEVRQPIPAEPGQPLRYDYEYKRNGTANLFVFLDAHRSWRRVKVTERR EEEECCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCHHHHHHHHH MAQDFAQCMRDLVDIHYPQAERIRLVLDNLSTHTAAALYQSMPPQEARRILQRIEFHYTP HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCC KHASWLNMVEIEIGVLRRQCLDRRIDCRERLIAEIEAWEHLRNASGARIHWMFSTDKARQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHH KLAKAYPVPACGKPS HHHHHCCCCCCCCCC >Mature Secondary Structure MNLQYRVELEPSEQEMLATLLGAGKHAARTLKRAQILLAAHAGRDDASIAATVAVGESTV CCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCCCEEEEEEECCHHH YRTKRRFVELGLEAALAEQARAGAQRKLSGKEQALLIATACANPPAGRARWTLELLADEF HHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH VKLTEHEALSCETVRRRLAENDLKPWRKDMWCIPKVDAEYVARMEDVLDLYAQDPDPQQP HHHHHCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC VVCFDESPTQLIGEVRQPIPAEPGQPLRYDYEYKRNGTANLFVFLDAHRSWRRVKVTERR EEEECCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEEEEEECCCCCHHHHHHHHH MAQDFAQCMRDLVDIHYPQAERIRLVLDNLSTHTAAALYQSMPPQEARRILQRIEFHYTP HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCC KHASWLNMVEIEIGVLRRQCLDRRIDCRERLIAEIEAWEHLRNASGARIHWMFSTDKARQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHH KLAKAYPVPACGKPS HHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA