| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is echA8 [H]
Identifier: 121610761
GI number: 121610761
Start: 4239285
End: 4240097
Strand: Direct
Name: echA8 [H]
Synonym: Veis_3841
Alternate gene names: 121610761
Gene position: 4239285-4240097 (Clockwise)
Preceding gene: 121610760
Following gene: 121610762
Centisome position: 76.15
GC content: 63.1
Gene sequence:
>813_bases ATGGGCTATCAACACATTCTCTACGCGGTGGATCATCACATCGCCACCATCACGCTCAACCGCCCGGCCCGCCTGAACGC CTGGACGGCCACCATGGAGCGGGAGGTACGCCAGGCGATGGAGCAGGCGGCGGACGATGACGGCGTGCGCGCCATCGTGC TCACAGGCGCTGGTCGCGGCTTTTGCGCAGGCGCCGACATGGACGAACTCAAAGACCTCGATCCCAACGACATCAAAAGC GACGCCTGGAGCCGGCCTTTTGACATGAATCGCCGTGCCGACTACCAGACCCGCTATGGCTTCTACCCTGCGCTGCCCAA GCCGGTGATCGGCATGCTCAACGGTGCCACCGCCGGGATTGGGCTGGTGCATGCGCTGTACTGCGACATCCGCTTCGCCG CAGACACAGCGGTTTTCACCACGTCGTTTTCCCGCCGCGGCCTGATTGCCGAGCATGGCCTGAGCTGGATGCTGCCATTG ATCGTCGGCCATGCGAATGCGCTCGATCTGCTGTTGTCGGCGCGCAAGGTGCAGGCTTGCGAGGCGCTGTCCATGGGGCT GGTGAACCAAGTGTTTCCAGCCGACAAGCTCCTGGAGCAGACCTCTGCCTATGTGCGTGACCTGGTGGACAACGTCTCAC CGCGTTCCATGCGGGTGATCAAGCGCCAGCAGTACGACGCCCCCTTCCAGACGCTGGCGGAAAACACGCTGGCCGCGAAT GCCGAGATGTCGCAAAGCGTCCTGAGCGCAGACTTCAGGGAGGGAGTGGCGCATTTTCTGGAAAAACGCCCCGCCCGCTT CACCGGCCATTGA
Upstream 100 bases:
>100_bases CCCTGCGGTGCAAGCCTATCTGCAACGTCCCAAAGGCCGCTGGCCTGGCCCTGCACAGTGATGTGCAGACCCTGCGGCTT TTTCTGACTGGAGTGTCACC
Downstream 100 bases:
>100_bases TCCTGTCCGGGTGCGATCGTGCCCTGCGACCAGCCTCTGGCCATGGCCGCATCGGCGGCGCAATGGGCGATGCGGCCCCA TGGTCCGCAACGTCGCCATG
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MGYQHILYAVDHHIATITLNRPARLNAWTATMEREVRQAMEQAADDDGVRAIVLTGAGRGFCAGADMDELKDLDPNDIKS DAWSRPFDMNRRADYQTRYGFYPALPKPVIGMLNGATAGIGLVHALYCDIRFAADTAVFTTSFSRRGLIAEHGLSWMLPL IVGHANALDLLLSARKVQACEALSMGLVNQVFPADKLLEQTSAYVRDLVDNVSPRSMRVIKRQQYDAPFQTLAENTLAAN AEMSQSVLSADFREGVAHFLEKRPARFTGH
Sequences:
>Translated_270_residues MGYQHILYAVDHHIATITLNRPARLNAWTATMEREVRQAMEQAADDDGVRAIVLTGAGRGFCAGADMDELKDLDPNDIKS DAWSRPFDMNRRADYQTRYGFYPALPKPVIGMLNGATAGIGLVHALYCDIRFAADTAVFTTSFSRRGLIAEHGLSWMLPL IVGHANALDLLLSARKVQACEALSMGLVNQVFPADKLLEQTSAYVRDLVDNVSPRSMRVIKRQQYDAPFQTLAENTLAAN AEMSQSVLSADFREGVAHFLEKRPARFTGH >Mature_269_residues GYQHILYAVDHHIATITLNRPARLNAWTATMEREVRQAMEQAADDDGVRAIVLTGAGRGFCAGADMDELKDLDPNDIKSD AWSRPFDMNRRADYQTRYGFYPALPKPVIGMLNGATAGIGLVHALYCDIRFAADTAVFTTSFSRRGLIAEHGLSWMLPLI VGHANALDLLLSARKVQACEALSMGLVNQVFPADKLLEQTSAYVRDLVDNVSPRSMRVIKRQQYDAPFQTLAENTLAANA EMSQSVLSADFREGVAHFLEKRPARFTGH
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=258, Percent_Identity=29.0697674418605, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI45643119, Length=266, Percent_Identity=27.4436090225564, Blast_Score=104, Evalue=8e-23, Organism=Homo sapiens, GI260275230, Length=266, Percent_Identity=27.4436090225564, Blast_Score=104, Evalue=8e-23, Organism=Homo sapiens, GI260274832, Length=266, Percent_Identity=27.4436090225564, Blast_Score=104, Evalue=9e-23, Organism=Homo sapiens, GI70995211, Length=214, Percent_Identity=32.2429906542056, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI4502327, Length=266, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI221307494, Length=208, Percent_Identity=27.4038461538462, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI221136756, Length=208, Percent_Identity=27.4038461538462, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI221136753, Length=208, Percent_Identity=27.4038461538462, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI31542718, Length=253, Percent_Identity=26.0869565217391, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI116235487, Length=191, Percent_Identity=30.8900523560209, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI20127408, Length=194, Percent_Identity=28.8659793814433, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI25453481, Length=208, Percent_Identity=26.4423076923077, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI51538573, Length=208, Percent_Identity=26.4423076923077, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI4757968, Length=210, Percent_Identity=25.2380952380952, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI49355787, Length=210, Percent_Identity=25.2380952380952, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI4757966, Length=208, Percent_Identity=26.4423076923077, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI51538581, Length=208, Percent_Identity=26.4423076923077, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI68989263, Length=188, Percent_Identity=30.3191489361702, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI213417737, Length=220, Percent_Identity=23.6363636363636, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI157694516, Length=220, Percent_Identity=23.6363636363636, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1787660, Length=267, Percent_Identity=35.2059925093633, Blast_Score=130, Evalue=7e-32, Organism=Escherichia coli, GI1788597, Length=270, Percent_Identity=32.2222222222222, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1787659, Length=281, Percent_Identity=30.6049822064057, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1788682, Length=191, Percent_Identity=29.8429319371728, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI221142681, Length=264, Percent_Identity=27.6515151515151, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI87082183, Length=278, Percent_Identity=25.1798561151079, Blast_Score=71, Evalue=9e-14, Organism=Caenorhabditis elegans, GI25145438, Length=258, Percent_Identity=31.3953488372093, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17554946, Length=256, Percent_Identity=28.90625, Blast_Score=97, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17549921, Length=218, Percent_Identity=32.1100917431193, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17536985, Length=264, Percent_Identity=28.030303030303, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17534483, Length=259, Percent_Identity=28.957528957529, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17535521, Length=258, Percent_Identity=27.906976744186, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17540714, Length=197, Percent_Identity=30.4568527918782, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17560910, Length=190, Percent_Identity=27.3684210526316, Blast_Score=77, Evalue=7e-15, Organism=Drosophila melanogaster, GI20129971, Length=260, Percent_Identity=30.3846153846154, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24653477, Length=260, Percent_Identity=30.3846153846154, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24654903, Length=262, Percent_Identity=25.1908396946565, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI24653139, Length=268, Percent_Identity=32.089552238806, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI19920382, Length=249, Percent_Identity=29.3172690763052, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI21357171, Length=193, Percent_Identity=31.6062176165803, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24650670, Length=198, Percent_Identity=31.8181818181818, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI19922422, Length=264, Percent_Identity=27.2727272727273, Blast_Score=82, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 29870; Mature: 29739
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYQHILYAVDHHIATITLNRPARLNAWTATMEREVRQAMEQAADDDGVRAIVLTGAGRG CCHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC FCAGADMDELKDLDPNDIKSDAWSRPFDMNRRADYQTRYGFYPALPKPVIGMLNGATAGI EECCCCHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHCCCHHHH GLVHALYCDIRFAADTAVFTTSFSRRGLIAEHGLSWMLPLIVGHANALDLLLSARKVQAC HHHHHHHHHHHHHCCHHHEECCCCCCCCHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHH EALSMGLVNQVFPADKLLEQTSAYVRDLVDNVSPRSMRVIKRQQYDAPFQTLAENTLAAN HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCC AEMSQSVLSADFREGVAHFLEKRPARFTGH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GYQHILYAVDHHIATITLNRPARLNAWTATMEREVRQAMEQAADDDGVRAIVLTGAGRG CHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC FCAGADMDELKDLDPNDIKSDAWSRPFDMNRRADYQTRYGFYPALPKPVIGMLNGATAGI EECCCCHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHCCCHHHH GLVHALYCDIRFAADTAVFTTSFSRRGLIAEHGLSWMLPLIVGHANALDLLLSARKVQAC HHHHHHHHHHHHHCCHHHEECCCCCCCCHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHH EALSMGLVNQVFPADKLLEQTSAYVRDLVDNVSPRSMRVIKRQQYDAPFQTLAENTLAAN HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCC AEMSQSVLSADFREGVAHFLEKRPARFTGH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]