| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
Click here to switch to the map view.
The map label for this gene is braC [H]
Identifier: 121610756
GI number: 121610756
Start: 4233994
End: 4235226
Strand: Direct
Name: braC [H]
Synonym: Veis_3836
Alternate gene names: 121610756
Gene position: 4233994-4235226 (Clockwise)
Preceding gene: 121610755
Following gene: 121610757
Centisome position: 76.06
GC content: 61.64
Gene sequence:
>1233_bases ATGGCGCAACGACACGGCAGGCATGGCCTGGTGGCAGCATGCATGGGACTGGCAGGGATGACGGTGGCGCTGGTCGCGCA CGCTGCGGACAAGACCTTGACCGTGGGGGTCAGTGATGCCCTGTCGGGTGGCGGGGCGGTGTATGGCGTACCCGAACTGC GCGCCATCGAACTGGCCGTCGAAGAGGTCAACGCCGCAGGGGGGATTCCTGTCGGTGGCGATGCCTACCGGCTCAAGACC ATCTCCTATGACGACAAGGCCGATCCCACCGAGGCGACCAATGTGGCGCGCAAACTGCTCGACCGCGACGGCGTCAAAGT CTTGCTGGGCTACTGCTGCTCGGCCTCGGGAGGCGCAGTGGCGTCTTTCATGGGGCGCGAGGATGCGTTGATGCTGGTGG GCACGGCAGGCGCGCGCGATATCACCGCTGCGGGCAACCCGAATGTGTTTCGCACCCGTCCGCCGGGTGATTACACCGGC GCTGCGGCGGGGCGCTATCTCTACGACAAGGGGGTGCGCACGCTGGGCATCCTGGGGGTGCGTGATGTGGCCTTGTTCAC CCAGTACCGCGAGGCATTGATCAAGCGTTTCGAGCAGGCTGGTGGCAAGGTGGTGGCGCTGGAGACCTTTGGCGGACATG ACCGTGACATGACCCCGCAACTGACCAAGCTCAAGCGCCTGGATCCCGATGCGGTCTTTATTTCGGGCTATGTCGAGCAG GCCGCGTTTGCCTACCGCCAATTCAAAGAAATTGGCATGAAAATGCCGCGCTACGGCTTTAGCGGCGGCAGCGAAAGGCA GTTTCTGAAAGTGGCCAGCAGCGAGCAGATGGAAGGGGTGACCGACCTGCTGTCGGTGGAGTTTTCGGTGCAGGCGCTGG GCAGCGAAAATGCCAAGCGTTTTGCCGATGCCTACAAGAAAAAGTACGGCGAGGAGCCTACCCCCAACACCGCCTATGCC TACGATCAGGTCTACGTGCTGCGTGATGCGCTCAAGAGTGCGCAAAGCACGAGCGATGTCAAGAAGCTGATCGCAGCGTT GCGCGGCCTGCCCGTGCCCAAGGAAGTCTTGCTCAAATACCAACCGATCGACGGAAAGATGTTTGACGGGAACGGCCAAG CCTATATCTCCAATGGCGCATTCCAGTGGAAGCAGGGTCAGTGGCAGTTCCTGGGCGAGTTGCCTTCGGATGCCAAGGCC TATTCGGCTTACCTGCGTTCGTTGCGCAAATAG
Upstream 100 bases:
>100_bases AGCCTGCGCGACAACCCCGAGATCAGCAATGCCTACCTGGGGCATTGAGGTCGACTTTTCGGTGATGGGCCTGTGGCGAA TTTCAAAGGAGTGAGACAAC
Downstream 100 bases:
>100_bases GCTGGATCCGGAGCCAGCCCCCACGATCCGACGCCCCCATGCTGCACAGGGTGTGCCGTGTTCATCGAACTGATACAACA AATTCTCAACGGTCTGGTCG
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: LIVAT-BP; Leu/Ile/Val/Thr/Ala-binding protein [H]
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MAQRHGRHGLVAACMGLAGMTVALVAHAADKTLTVGVSDALSGGGAVYGVPELRAIELAVEEVNAAGGIPVGGDAYRLKT ISYDDKADPTEATNVARKLLDRDGVKVLLGYCCSASGGAVASFMGREDALMLVGTAGARDITAAGNPNVFRTRPPGDYTG AAAGRYLYDKGVRTLGILGVRDVALFTQYREALIKRFEQAGGKVVALETFGGHDRDMTPQLTKLKRLDPDAVFISGYVEQ AAFAYRQFKEIGMKMPRYGFSGGSERQFLKVASSEQMEGVTDLLSVEFSVQALGSENAKRFADAYKKKYGEEPTPNTAYA YDQVYVLRDALKSAQSTSDVKKLIAALRGLPVPKEVLLKYQPIDGKMFDGNGQAYISNGAFQWKQGQWQFLGELPSDAKA YSAYLRSLRK
Sequences:
>Translated_410_residues MAQRHGRHGLVAACMGLAGMTVALVAHAADKTLTVGVSDALSGGGAVYGVPELRAIELAVEEVNAAGGIPVGGDAYRLKT ISYDDKADPTEATNVARKLLDRDGVKVLLGYCCSASGGAVASFMGREDALMLVGTAGARDITAAGNPNVFRTRPPGDYTG AAAGRYLYDKGVRTLGILGVRDVALFTQYREALIKRFEQAGGKVVALETFGGHDRDMTPQLTKLKRLDPDAVFISGYVEQ AAFAYRQFKEIGMKMPRYGFSGGSERQFLKVASSEQMEGVTDLLSVEFSVQALGSENAKRFADAYKKKYGEEPTPNTAYA YDQVYVLRDALKSAQSTSDVKKLIAALRGLPVPKEVLLKYQPIDGKMFDGNGQAYISNGAFQWKQGQWQFLGELPSDAKA YSAYLRSLRK >Mature_409_residues AQRHGRHGLVAACMGLAGMTVALVAHAADKTLTVGVSDALSGGGAVYGVPELRAIELAVEEVNAAGGIPVGGDAYRLKTI SYDDKADPTEATNVARKLLDRDGVKVLLGYCCSASGGAVASFMGREDALMLVGTAGARDITAAGNPNVFRTRPPGDYTGA AAGRYLYDKGVRTLGILGVRDVALFTQYREALIKRFEQAGGKVVALETFGGHDRDMTPQLTKLKRLDPDAVFISGYVEQA AFAYRQFKEIGMKMPRYGFSGGSERQFLKVASSEQMEGVTDLLSVEFSVQALGSENAKRFADAYKKKYGEEPTPNTAYAY DQVYVLRDALKSAQSTSDVKKLIAALRGLPVPKEVLLKYQPIDGKMFDGNGQAYISNGAFQWKQGQWQFLGELPSDAKAY SAYLRSLRK
Specific function: Component of the high-affinity leucine, isoleucine, valine transport system I (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=275, Percent_Identity=29.8181818181818, Blast_Score=99, Evalue=7e-22, Organism=Escherichia coli, GI1789867, Length=251, Percent_Identity=28.6852589641434, Blast_Score=90, Evalue=3e-19,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 44135; Mature: 44004
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQRHGRHGLVAACMGLAGMTVALVAHAADKTLTVGVSDALSGGGAVYGVPELRAIELAV CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCEEECCCCHHHHHHHH EEVNAAGGIPVGGDAYRLKTISYDDKADPTEATNVARKLLDRDGVKVLLGYCCSASGGAV HHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHH ASFMGREDALMLVGTAGARDITAAGNPNVFRTRPPGDYTGAAAGRYLYDKGVRTLGILGV HHHCCCCCCEEEEECCCCCCEECCCCCCEEECCCCCCCCCCCCCCHHHHCCCHHEEHHHH RDVALFTQYREALIKRFEQAGGKVVALETFGGHDRDMTPQLTKLKRLDPDAVFISGYVEQ HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEHHHHHH AAFAYRQFKEIGMKMPRYGFSGGSERQFLKVASSEQMEGVTDLLSVEFSVQALGSENAKR HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCHHHH FADAYKKKYGEEPTPNTAYAYDQVYVLRDALKSAQSTSDVKKLIAALRGLPVPKEVLLKY HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHEEE QPIDGKMFDGNGQAYISNGAFQWKQGQWQFLGELPSDAKAYSAYLRSLRK CCCCCEEECCCCCEEEECCEEEECCCCHHEECCCCCHHHHHHHHHHHHCC >Mature Secondary Structure AQRHGRHGLVAACMGLAGMTVALVAHAADKTLTVGVSDALSGGGAVYGVPELRAIELAV CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCEEECCCCHHHHHHHH EEVNAAGGIPVGGDAYRLKTISYDDKADPTEATNVARKLLDRDGVKVLLGYCCSASGGAV HHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHH ASFMGREDALMLVGTAGARDITAAGNPNVFRTRPPGDYTGAAAGRYLYDKGVRTLGILGV HHHCCCCCCEEEEECCCCCCEECCCCCCEEECCCCCCCCCCCCCCHHHHCCCHHEEHHHH RDVALFTQYREALIKRFEQAGGKVVALETFGGHDRDMTPQLTKLKRLDPDAVFISGYVEQ HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEHHHHHH AAFAYRQFKEIGMKMPRYGFSGGSERQFLKVASSEQMEGVTDLLSVEFSVQALGSENAKR HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCHHHH FADAYKKKYGEEPTPNTAYAYDQVYVLRDALKSAQSTSDVKKLIAALRGLPVPKEVLLKY HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHEEE QPIDGKMFDGNGQAYISNGAFQWKQGQWQFLGELPSDAKAYSAYLRSLRK CCCCCEEECCCCCEEEECCEEEECCCCHHEECCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2509433; 2120183; 10984043 [H]