| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is tauC [C]
Identifier: 121610711
GI number: 121610711
Start: 4178681
End: 4179511
Strand: Direct
Name: tauC [C]
Synonym: Veis_3788
Alternate gene names: 121610711
Gene position: 4178681-4179511 (Clockwise)
Preceding gene: 121610710
Following gene: 121610712
Centisome position: 75.07
GC content: 65.94
Gene sequence:
>831_bases ATGTCTGAATCATCTTCACCGGGATCGATAGCCTGCCGCGCTGGCTCCATCTGGGCCATCCGCCAAAACCTGGGGCGCCG GCTCACCGGGGCGCTCGCCGTCGCCGGCCTGCTCGTGCCGCTGCTCGGCTGGGTGCTGGCCGCCGGCAGCGGTCTGGCAG ACCCCGTGTTCCTGCCCGGCCCGGCGGCGGTGCTGGGCCAACTCTTTTCCTGGATGACGCAAGACGCTCTTCTGGCCGAT GCCGGCATCAGCGTGCTGCGCGTCGTCGGTGGCTGGGCGCTGTCGGCCCTGGTGGCGCTGCCGCTGGGCTTGTGCATAGG CACCTGGCGCTCGGTGCAGGCCCTGCTCGAAGCCTTGATCGACTTCATCCGCTACATGCCGGCGGTGGCTTTCGTGCCGC TGGTGATGCTGTGGGTCGGAATCGACGAGGGCGCGAAGATCGCCATCATCTTCATCGGCACGTTTTTTCAGATGGTGCTG ATGGTGGCCGAGGATGTGCGGCTGGTGCCGATGGCGCAGATCGAGGCGGCGCAGACCATGGGGGCCAGCCGTGGCGAGAT TGTCCAGTACGTGATCTTGCCTGCGGCCAAGCCGGCGCTGCTCGACACCTTGCGCATCACCATGGGCTGGGCCTGGACCT ACCTGGTCGTGGCCGAACTGGTGGCAGCCAATTCGGGTCTTGGTTTTGCCATTCTCAAGGCCCAGCGCTTTTTGCAGACC GACAAGATTTTTGCCGGCATCTTGCTCATCGGCGCCATCGGACTGCTGAGCGACCAGCTCTTTCGCCTGGCGCACCGGCG GGCGTTTCCATGGCTGCACGCCCGGGGTTGA
Upstream 100 bases:
>100_bases CACGACCGCGCCCAGGCTCCACGGCGGGACAAAAGCCCGGGAGATGCACTTCGCTTCGAGGTGGTTTCCCTGCCTTCGTC GAATCCGTTTGGAGCCTGCC
Downstream 100 bases:
>100_bases GCGATGAAAATCCAGTGTCGAAACCTGTCGAAGTTCTTTGGCGCCGGGGCGCAGCGCCTGACTGCGCTCGACAACATCGG GCTGCAGGTGCAGCACAACG
Product: binding-protein-dependent transport systems inner membrane component
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSESSSPGSIACRAGSIWAIRQNLGRRLTGALAVAGLLVPLLGWVLAAGSGLADPVFLPGPAAVLGQLFSWMTQDALLAD AGISVLRVVGGWALSALVALPLGLCIGTWRSVQALLEALIDFIRYMPAVAFVPLVMLWVGIDEGAKIAIIFIGTFFQMVL MVAEDVRLVPMAQIEAAQTMGASRGEIVQYVILPAAKPALLDTLRITMGWAWTYLVVAELVAANSGLGFAILKAQRFLQT DKIFAGILLIGAIGLLSDQLFRLAHRRAFPWLHARG
Sequences:
>Translated_276_residues MSESSSPGSIACRAGSIWAIRQNLGRRLTGALAVAGLLVPLLGWVLAAGSGLADPVFLPGPAAVLGQLFSWMTQDALLAD AGISVLRVVGGWALSALVALPLGLCIGTWRSVQALLEALIDFIRYMPAVAFVPLVMLWVGIDEGAKIAIIFIGTFFQMVL MVAEDVRLVPMAQIEAAQTMGASRGEIVQYVILPAAKPALLDTLRITMGWAWTYLVVAELVAANSGLGFAILKAQRFLQT DKIFAGILLIGAIGLLSDQLFRLAHRRAFPWLHARG >Mature_275_residues SESSSPGSIACRAGSIWAIRQNLGRRLTGALAVAGLLVPLLGWVLAAGSGLADPVFLPGPAAVLGQLFSWMTQDALLADA GISVLRVVGGWALSALVALPLGLCIGTWRSVQALLEALIDFIRYMPAVAFVPLVMLWVGIDEGAKIAIIFIGTFFQMVLM VAEDVRLVPMAQIEAAQTMGASRGEIVQYVILPAAKPALLDTLRITMGWAWTYLVVAELVAANSGLGFAILKAQRFLQTD KIFAGILLIGAIGLLSDQLFRLAHRRAFPWLHARG
Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=257, Percent_Identity=35.7976653696498, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI87081802, Length=228, Percent_Identity=33.7719298245614, Blast_Score=114, Evalue=5e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29386; Mature: 29255
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESSSPGSIACRAGSIWAIRQNLGRRLTGALAVAGLLVPLLGWVLAAGSGLADPVFLPG CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PAAVLGQLFSWMTQDALLADAGISVLRVVGGWALSALVALPLGLCIGTWRSVQALLEALI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFIRYMPAVAFVPLVMLWVGIDEGAKIAIIFIGTFFQMVLMVAEDVRLVPMAQIEAAQTM HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC GASRGEIVQYVILPAAKPALLDTLRITMGWAWTYLVVAELVAANSGLGFAILKAQRFLQT CCCCCHHEEHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH DKIFAGILLIGAIGLLSDQLFRLAHRRAFPWLHARG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SESSSPGSIACRAGSIWAIRQNLGRRLTGALAVAGLLVPLLGWVLAAGSGLADPVFLPG CCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PAAVLGQLFSWMTQDALLADAGISVLRVVGGWALSALVALPLGLCIGTWRSVQALLEALI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFIRYMPAVAFVPLVMLWVGIDEGAKIAIIFIGTFFQMVLMVAEDVRLVPMAQIEAAQTM HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC GASRGEIVQYVILPAAKPALLDTLRITMGWAWTYLVVAELVAANSGLGFAILKAQRFLQT CCCCCHHEEHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH DKIFAGILLIGAIGLLSDQLFRLAHRRAFPWLHARG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA