Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

Click here to switch to the map view.

The map label for this gene is 121610675

Identifier: 121610675

GI number: 121610675

Start: 4148290

End: 4149279

Strand: Direct

Name: 121610675

Synonym: Veis_3752

Alternate gene names: NA

Gene position: 4148290-4149279 (Clockwise)

Preceding gene: 121610671

Following gene: 121610676

Centisome position: 74.52

GC content: 57.78

Gene sequence:

>990_bases
ATGAGCAAACTTCGACCCGGCAGCCCACTGCCCGCGATTCACGGGAACATGACGCTGGATCTCTTTGGATTCGAAGACGC
GCGTCTGAATCAGTTGAACATCATCCAGCACACCACATCGGTGATTACTCATCTGGAAGCGATGCAGGCCAACGCCATGG
CCATGTGTCTGCACATGTTCCTGTTGCGCCAGGAATTTGATGTGGTCGGCGACAAAACTTGGGGTATGTTTTGCGAGCGC
AATTTCAAGAAATATGGGCTTCACGAATCCGGCATCCGCGCTGCAATCCGCACGGGGAAAGTCCTGGCGAACCTTGGGCA
CAAAGGGCACGATTCGACCGAATTGGCTCAACTGAGCCGCGCAGCCCTTTTTGCTTTTGGCGATGCCCCGGTGGATGTGC
AGGAAAAACTCCTGGCCGACGTAAAAGAGACGATTCACGACCGGGGAAAGGGACCCACGGCGGATGAAATCAAAAAGCGC
GTCGAGGAACTGTCCGCTGAAGTCTCCGACAAGGCCGGGCTGCTGAAAGAAAAAGACGCCGCGATCTACCGATTGAACAC
GGCGCTCCAGGCGCGAGAAACCGAAGCATCGCAAGCGCGCGAAGAAATCGACCGCCTCCATCGTCGCCTGCAGAACCAGG
CGCAGGAAGTCGTTCATCAACTGCCCAAGGGCGTCAAGGACGCAGAAGCGCTGAGGCAGCAGATCGAAGATGAAATCACG
GCCAAGCGCGACGAACTCATGCGCACCGATGCCGAGATCACCAAACTGCGCGATCAGCACCAGCGTTTGCAGCAGCAAGC
CGCGCTGCGCGCCCATGCGCAAAACGCACTCGAATCCCTCGAAGGTGACCTCAAGGCACTGACTATGAAGTACACCGAGG
TGCTGGTCGAGAAGATCCGTAGCGCCGACCGGAACAATATCCAGACGCTCGACAGGCTCGCCAACGGCTTGCGCGCTCTG
GCCGACCAACTCTCTGCGACCCTGGTCTAG

Upstream 100 bases:

>100_bases
AATGGCGAAGTTTTTGAATTTGATATCTGTTATCCCACTGTAAGAATCAAAAAGCAAGGCAATTCCTTGCTCATTCCATC
TTACCGCAGGAGACGACAAA

Downstream 100 bases:

>100_bases
GGAGGGCGCCATGGTCGCGAACGAGAAAACCACAGCAAACGCAAATCTTTCACCCATTTCACCCATTCGTGAGGGTCTTG
TCGGCCCGGCGTTTCAGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MSKLRPGSPLPAIHGNMTLDLFGFEDARLNQLNIIQHTTSVITHLEAMQANAMAMCLHMFLLRQEFDVVGDKTWGMFCER
NFKKYGLHESGIRAAIRTGKVLANLGHKGHDSTELAQLSRAALFAFGDAPVDVQEKLLADVKETIHDRGKGPTADEIKKR
VEELSAEVSDKAGLLKEKDAAIYRLNTALQARETEASQAREEIDRLHRRLQNQAQEVVHQLPKGVKDAEALRQQIEDEIT
AKRDELMRTDAEITKLRDQHQRLQQQAALRAHAQNALESLEGDLKALTMKYTEVLVEKIRSADRNNIQTLDRLANGLRAL
ADQLSATLV

Sequences:

>Translated_329_residues
MSKLRPGSPLPAIHGNMTLDLFGFEDARLNQLNIIQHTTSVITHLEAMQANAMAMCLHMFLLRQEFDVVGDKTWGMFCER
NFKKYGLHESGIRAAIRTGKVLANLGHKGHDSTELAQLSRAALFAFGDAPVDVQEKLLADVKETIHDRGKGPTADEIKKR
VEELSAEVSDKAGLLKEKDAAIYRLNTALQARETEASQAREEIDRLHRRLQNQAQEVVHQLPKGVKDAEALRQQIEDEIT
AKRDELMRTDAEITKLRDQHQRLQQQAALRAHAQNALESLEGDLKALTMKYTEVLVEKIRSADRNNIQTLDRLANGLRAL
ADQLSATLV
>Mature_328_residues
SKLRPGSPLPAIHGNMTLDLFGFEDARLNQLNIIQHTTSVITHLEAMQANAMAMCLHMFLLRQEFDVVGDKTWGMFCERN
FKKYGLHESGIRAAIRTGKVLANLGHKGHDSTELAQLSRAALFAFGDAPVDVQEKLLADVKETIHDRGKGPTADEIKKRV
EELSAEVSDKAGLLKEKDAAIYRLNTALQARETEASQAREEIDRLHRRLQNQAQEVVHQLPKGVKDAEALRQQIEDEITA
KRDELMRTDAEITKLRDQHQRLQQQAALRAHAQNALESLEGDLKALTMKYTEVLVEKIRSADRNNIQTLDRLANGLRALA
DQLSATLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36905; Mature: 36773

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLRPGSPLPAIHGNMTLDLFGFEDARLNQLNIIQHTTSVITHLEAMQANAMAMCLHMF
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLRQEFDVVGDKTWGMFCERNFKKYGLHESGIRAAIRTGKVLANLGHKGHDSTELAQLSR
HHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
AALFAFGDAPVDVQEKLLADVKETIHDRGKGPTADEIKKRVEELSAEVSDKAGLLKEKDA
HHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCCH
AIYRLNTALQARETEASQAREEIDRLHRRLQNQAQEVVHQLPKGVKDAEALRQQIEDEIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AKRDELMRTDAEITKLRDQHQRLQQQAALRAHAQNALESLEGDLKALTMKYTEVLVEKIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SADRNNIQTLDRLANGLRALADQLSATLV
CCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKLRPGSPLPAIHGNMTLDLFGFEDARLNQLNIIQHTTSVITHLEAMQANAMAMCLHMF
CCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH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CCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA