Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

Click here to switch to the map view.

The map label for this gene is 121610670

Identifier: 121610670

GI number: 121610670

Start: 4142849

End: 4143412

Strand: Direct

Name: 121610670

Synonym: Veis_3747

Alternate gene names: NA

Gene position: 4142849-4143412 (Clockwise)

Preceding gene: 121610669

Following gene: 121610671

Centisome position: 74.42

GC content: 62.94

Gene sequence:

>564_bases
ATGGCTGACGAACCAGGCCTTGATGCCTATCCAAAGCTGCAGGGGCACATCCTTTCACGCAAGGAATTTGGGCCGCTACT
TCGCAGTCGCGCAAGGGCCAAACATCAAGCCGAATGGCGCGATCTGATCCGCGCCTTGGCTGCCATGCCGCCCTCCTCTG
CCGAGCTCGCCGAACGCTTCCATACGCAGTGGCACGTCTGCCACCACTTCCTGCGCGAGCTCGTCGCCGACGACGACCTG
TTGCTGCCGATGCTGAGGGTTTGGCTGCCTCGCTACGAAGGCCCGGACATGGTCCTCTATCGCGGCGAGAACATCGACCG
ATTTGAAGCCGGCCGGATCGGCACCGCGTGGAGCGACAAGCTCGAGACGGCGGACATGTTCGCCCAGGGCCTCAACGCCG
TCGGCAAGGGCGGAGTGATCTTGCGAACGCTGGCCCCTGCTGCAGCAATCATCGCCGGCCCGTCATGGCATAGCGCGCAA
TGGCTCGGCGAGAGCGAGTTCACTGTGGACAGCGGCAAGCTCGGCAAGATTCAAGCCGTAGCGCGATTCAAGCCAAGTCA
CTGA

Upstream 100 bases:

>100_bases
TTACAACCCCCTTCAAGCCTGCGCTGGCCTGCGGTGCGGAGTTGTGGGGAAACCTCAGACCTGGAGCGAGGCAAACGAAG
GCAAATGAAGGGGTCCAAAC

Downstream 100 bases:

>100_bases
GACGTTAGCCATCGGGTAATTGCCGGGACATGTGGGACTGCAGTGGCCGCGCGCAACCCATAAGAAGCGCGTCTCGGCGT
CCTGCTACCATCACGCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MADEPGLDAYPKLQGHILSRKEFGPLLRSRARAKHQAEWRDLIRALAAMPPSSAELAERFHTQWHVCHHFLRELVADDDL
LLPMLRVWLPRYEGPDMVLYRGENIDRFEAGRIGTAWSDKLETADMFAQGLNAVGKGGVILRTLAPAAAIIAGPSWHSAQ
WLGESEFTVDSGKLGKIQAVARFKPSH

Sequences:

>Translated_187_residues
MADEPGLDAYPKLQGHILSRKEFGPLLRSRARAKHQAEWRDLIRALAAMPPSSAELAERFHTQWHVCHHFLRELVADDDL
LLPMLRVWLPRYEGPDMVLYRGENIDRFEAGRIGTAWSDKLETADMFAQGLNAVGKGGVILRTLAPAAAIIAGPSWHSAQ
WLGESEFTVDSGKLGKIQAVARFKPSH
>Mature_186_residues
ADEPGLDAYPKLQGHILSRKEFGPLLRSRARAKHQAEWRDLIRALAAMPPSSAELAERFHTQWHVCHHFLRELVADDDLL
LPMLRVWLPRYEGPDMVLYRGENIDRFEAGRIGTAWSDKLETADMFAQGLNAVGKGGVILRTLAPAAAIIAGPSWHSAQW
LGESEFTVDSGKLGKIQAVARFKPSH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20886; Mature: 20755

Theoretical pI: Translated: 7.84; Mature: 7.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADEPGLDAYPKLQGHILSRKEFGPLLRSRARAKHQAEWRDLIRALAAMPPSSAELAERF
CCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
HTQWHVCHHFLRELVADDDLLLPMLRVWLPRYEGPDMVLYRGENIDRFEAGRIGTAWSDK
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHH
LETADMFAQGLNAVGKGGVILRTLAPAAAIIAGPSWHSAQWLGESEFTVDSGKLGKIQAV
HHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCHHHCCCCCEEECCCCCCHHHHH
ARFKPSH
CCCCCCC
>Mature Secondary Structure 
ADEPGLDAYPKLQGHILSRKEFGPLLRSRARAKHQAEWRDLIRALAAMPPSSAELAERF
CCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
HTQWHVCHHFLRELVADDDLLLPMLRVWLPRYEGPDMVLYRGENIDRFEAGRIGTAWSDK
HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHH
LETADMFAQGLNAVGKGGVILRTLAPAAAIIAGPSWHSAQWLGESEFTVDSGKLGKIQAV
HHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCHHHCCCCCEEECCCCCCHHHHH
ARFKPSH
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA