| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610659
Identifier: 121610659
GI number: 121610659
Start: 4127701
End: 4128279
Strand: Direct
Name: 121610659
Synonym: Veis_3733
Alternate gene names: NA
Gene position: 4127701-4128279 (Clockwise)
Preceding gene: 121610652
Following gene: 121610661
Centisome position: 74.15
GC content: 59.59
Gene sequence:
>579_bases GTGCAAACACCACCCACCCAAACCCTCGATGTCTGCGACTCATCTATCGAGGATGCGATCGCCGAGGCCTGCGTTGAACT GAAAAACGAACACCGCATGAATGCGCTTCGCACCCGCATGCGTGCCCATGTCGATGTGACGTTCCAGGCGTCCCCTGTGG CCCGCGTGATGCGACGCGACTGGAACATCGTCAGCAGCAAGCTGTACGTCAACGCCCTGGCCCAAGACTATCGCCAGCGC ATCGAATCGGACATGATCGAGATGACCTGGCAGATGGATGACACCGCCGACCAGGTTCGCGCCATGCCTTTCGAGAAACT CGACACCAGCTGGCTGCACCCTCGCCGCATGCAGGTGCAGGTAGTCCACCCCATCACTGCCGCCTGGCTGCGCTCCATGG TCGCTATGGACGAGATGTACGCAAAGCTGATATGTGCCGAGAAAGCCGGCATGATTACGCTGCGCAAGCGCCATGCCCTG CTGCTGCCCTGCCAGCTCTCCTACATGGCTTTCAAGGCAACGGCCATGAAGATGCAATTGCGCTGCACGGATGAACTGCT GATCCAGGCCAACCTCTGA
Upstream 100 bases:
>100_bases CATGATGCTCCCTCTCCGGGGGCGGATGAGCGCCGAATGAAATCCTCGAACTCCGAGCATTTGACCGTTGGCGCCACACC CCCCCGGAATAATCGCAAGG
Downstream 100 bases:
>100_bases GCGCGGCGATTAAATCCTTCATGGAATTGACGAGTTTTCGACCGGCTAAATTTAGCCGGTCGGTCGTCACTCAGACGCCA GCCTGGGAAGATCGGCGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MQTPPTQTLDVCDSSIEDAIAEACVELKNEHRMNALRTRMRAHVDVTFQASPVARVMRRDWNIVSSKLYVNALAQDYRQR IESDMIEMTWQMDDTADQVRAMPFEKLDTSWLHPRRMQVQVVHPITAAWLRSMVAMDEMYAKLICAEKAGMITLRKRHAL LLPCQLSYMAFKATAMKMQLRCTDELLIQANL
Sequences:
>Translated_192_residues MQTPPTQTLDVCDSSIEDAIAEACVELKNEHRMNALRTRMRAHVDVTFQASPVARVMRRDWNIVSSKLYVNALAQDYRQR IESDMIEMTWQMDDTADQVRAMPFEKLDTSWLHPRRMQVQVVHPITAAWLRSMVAMDEMYAKLICAEKAGMITLRKRHAL LLPCQLSYMAFKATAMKMQLRCTDELLIQANL >Mature_192_residues MQTPPTQTLDVCDSSIEDAIAEACVELKNEHRMNALRTRMRAHVDVTFQASPVARVMRRDWNIVSSKLYVNALAQDYRQR IESDMIEMTWQMDDTADQVRAMPFEKLDTSWLHPRRMQVQVVHPITAAWLRSMVAMDEMYAKLICAEKAGMITLRKRHAL LLPCQLSYMAFKATAMKMQLRCTDELLIQANL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22219; Mature: 22219
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 8.3 %Met (Translated Protein) 10.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 8.3 %Met (Mature Protein) 10.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTPPTQTLDVCDSSIEDAIAEACVELKNEHRMNALRTRMRAHVDVTFQASPVARVMRRD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHH WNIVSSKLYVNALAQDYRQRIESDMIEMTWQMDDTADQVRAMPFEKLDTSWLHPRRMQVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHCCCCCCCCCCEEEE VVHPITAAWLRSMVAMDEMYAKLICAEKAGMITLRKRHALLLPCQLSYMAFKATAMKMQL EECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECHHHHHHHHHHHHHHHHE RCTDELLIQANL EECHHEEEEECC >Mature Secondary Structure MQTPPTQTLDVCDSSIEDAIAEACVELKNEHRMNALRTRMRAHVDVTFQASPVARVMRRD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHH WNIVSSKLYVNALAQDYRQRIESDMIEMTWQMDDTADQVRAMPFEKLDTSWLHPRRMQVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHCCCCCCCCCCEEEE VVHPITAAWLRSMVAMDEMYAKLICAEKAGMITLRKRHALLLPCQLSYMAFKATAMKMQL EECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEECHHHHHHHHHHHHHHHHE RCTDELLIQANL EECHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA