| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610596
Identifier: 121610596
GI number: 121610596
Start: 4056692
End: 4057300
Strand: Direct
Name: 121610596
Synonym: Veis_3669
Alternate gene names: NA
Gene position: 4056692-4057300 (Clockwise)
Preceding gene: 121610595
Following gene: 121610597
Centisome position: 72.87
GC content: 63.05
Gene sequence:
>609_bases ATGCCCGCCCCACTCGCCTTCCGTCCCGATGGCATCGATCTGCACGGCCAGGCCCGAACCCTGATCGTGGGCATCGTCGC GGGCATTGCTCTGACGGTGCTCTACCAGAACGCCACGGGCTTGAACGCTGGCCAAGCCCTTCCTGCCGAGGTCGCCATCG CTCCAGGACAGGCGCCCGCCCAAGCCGCCATCCCTGCTCAGTACCAGCAGATCATCGATACCTCGCCGGGCTTGCCGGTT CTTCCTGCACCACATGCCGTTGCCTTGTCGATCGAGGACACCAAGGCAGCCGTGCAGGAGAAAAAAGTCGATGACGCCAA CGCCGGCGGTGTGCATGTCGTGATCCGCAAGAGGCAAGTCCCGCAGACTGTCGCTCCAGCGATCGAGGCGAATCCTGCTG AAAAACCCGCCCAAGCCACAAGCCAGGAACCACTGGATCAGGCAACACCCTCGGCTGGCCCCGTCAAGTTGCAAGCAGCG CCGGTCGAACCAGTGCAGGCCCCGCAAAAATCCACGCCGGATTTGCGCATCATCCAACAGCAGCCCGATGGTTTGCTGGT GCGCATCGGAAATCAGGTGCGCTTCATCGAGGCTGGCGCCAAGCGTTGA
Upstream 100 bases:
>100_bases GGCCCTTACCTGTCGGTCTTGTGTGCTTTCTTGCTGACGATGGCTCTGGCAATGGCGCTGAAGTGGTATGCGCCGATCGG CCAGGATCCGGGGCCATGAA
Downstream 100 bases:
>100_bases ATCCTCTTGCGCCTATCCCGCATTCAGACTTGATCCGACGCCATCGGGTGGGAGCATGGATGAACTCCTCCAACCGCAGA CAACGATGGCCAACCACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MPAPLAFRPDGIDLHGQARTLIVGIVAGIALTVLYQNATGLNAGQALPAEVAIAPGQAPAQAAIPAQYQQIIDTSPGLPV LPAPHAVALSIEDTKAAVQEKKVDDANAGGVHVVIRKRQVPQTVAPAIEANPAEKPAQATSQEPLDQATPSAGPVKLQAA PVEPVQAPQKSTPDLRIIQQQPDGLLVRIGNQVRFIEAGAKR
Sequences:
>Translated_202_residues MPAPLAFRPDGIDLHGQARTLIVGIVAGIALTVLYQNATGLNAGQALPAEVAIAPGQAPAQAAIPAQYQQIIDTSPGLPV LPAPHAVALSIEDTKAAVQEKKVDDANAGGVHVVIRKRQVPQTVAPAIEANPAEKPAQATSQEPLDQATPSAGPVKLQAA PVEPVQAPQKSTPDLRIIQQQPDGLLVRIGNQVRFIEAGAKR >Mature_201_residues PAPLAFRPDGIDLHGQARTLIVGIVAGIALTVLYQNATGLNAGQALPAEVAIAPGQAPAQAAIPAQYQQIIDTSPGLPVL PAPHAVALSIEDTKAAVQEKKVDDANAGGVHVVIRKRQVPQTVAPAIEANPAEKPAQATSQEPLDQATPSAGPVKLQAAP VEPVQAPQKSTPDLRIIQQQPDGLLVRIGNQVRFIEAGAKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20902; Mature: 20771
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPLAFRPDGIDLHGQARTLIVGIVAGIALTVLYQNATGLNAGQALPAEVAIAPGQAPA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCC QAAIPAQYQQIIDTSPGLPVLPAPHAVALSIEDTKAAVQEKKVDDANAGGVHVVIRKRQV CCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCEEEEEECCCC PQTVAPAIEANPAEKPAQATSQEPLDQATPSAGPVKLQAAPVEPVQAPQKSTPDLRIIQQ CHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEE QPDGLLVRIGNQVRFIEAGAKR CCCCEEEEECCEEEEEECCCCC >Mature Secondary Structure PAPLAFRPDGIDLHGQARTLIVGIVAGIALTVLYQNATGLNAGQALPAEVAIAPGQAPA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCC QAAIPAQYQQIIDTSPGLPVLPAPHAVALSIEDTKAAVQEKKVDDANAGGVHVVIRKRQV CCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCEEEEEECCCC PQTVAPAIEANPAEKPAQATSQEPLDQATPSAGPVKLQAAPVEPVQAPQKSTPDLRIIQQ CHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEE QPDGLLVRIGNQVRFIEAGAKR CCCCEEEEECCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA