| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
Click here to switch to the map view.
The map label for this gene is 121610531
Identifier: 121610531
GI number: 121610531
Start: 3981473
End: 3982009
Strand: Direct
Name: 121610531
Synonym: Veis_3603
Alternate gene names: NA
Gene position: 3981473-3982009 (Clockwise)
Preceding gene: 121610530
Following gene: 121610532
Centisome position: 71.52
GC content: 57.36
Gene sequence:
>537_bases ATGAACAAATGGTTCTCCGCGTCGCTTGCGCTGCTCCTCGGAGCGAGCATTGCCCATGCTGCCGAAACACCGATCGGCAA GCATCAGATCGTCAAAGGGATGGAGATTGGTGCCGTCTATCTGCAGCCCGTCAAAATGGACCCGGACGGCATGATGAAGA AGGTCGAAGAATCCGACATCCATCTGGAAGCCGACATCCACGCAGCGAAGGACAATCCCAACGGATTTGCCGAAGGCGAC TGGATGCCCTATCTGGTCGTCAAGTTCGAGCTTGTCAAGCCGGGCAGCAGCTTTCGTCTCGATGGCGAACTGATGCCGAT GGTTGCCAATGACGGGCCGCACTATGGCGATAACGTCAAATTGGCCGGTCCCGGCAAGTACAAGCTGAAATTCACGATCC AGCCGCCGACGGCCAACTCCCACGCGCACTTTGGTCGCCATGTCGACAAAGAAACCGGGGTCGGTCCATGGTTCGCCCCC TTCGAGTTGAACTACGACTTCGTCTACGCGGGCACGGGCAAAAAAGGCGGGTACTGA
Upstream 100 bases:
>100_bases GCAGGCCCGGGCGGCGAGGAAGGGATACGGATTCAGGCGTATGATAGCGATTCGCATTCGCTATCAGATGCGCTCCCCAA CCTTTCAAGGAATGACAGAC
Downstream 100 bases:
>100_bases CTGAGGGTGAGGGCGGGCACTGGCACCGCTTGGCAATGGCAGTGAATCCTCTCGAAAGGCGCGGCATGCTGAATAAACGA TGGTGTTTGGCGTTCCTTGG
Product: putative periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MNKWFSASLALLLGASIAHAAETPIGKHQIVKGMEIGAVYLQPVKMDPDGMMKKVEESDIHLEADIHAAKDNPNGFAEGD WMPYLVVKFELVKPGSSFRLDGELMPMVANDGPHYGDNVKLAGPGKYKLKFTIQPPTANSHAHFGRHVDKETGVGPWFAP FELNYDFVYAGTGKKGGY
Sequences:
>Translated_178_residues MNKWFSASLALLLGASIAHAAETPIGKHQIVKGMEIGAVYLQPVKMDPDGMMKKVEESDIHLEADIHAAKDNPNGFAEGD WMPYLVVKFELVKPGSSFRLDGELMPMVANDGPHYGDNVKLAGPGKYKLKFTIQPPTANSHAHFGRHVDKETGVGPWFAP FELNYDFVYAGTGKKGGY >Mature_178_residues MNKWFSASLALLLGASIAHAAETPIGKHQIVKGMEIGAVYLQPVKMDPDGMMKKVEESDIHLEADIHAAKDNPNGFAEGD WMPYLVVKFELVKPGSSFRLDGELMPMVANDGPHYGDNVKLAGPGKYKLKFTIQPPTANSHAHFGRHVDKETGVGPWFAP FELNYDFVYAGTGKKGGY
Specific function: Unknown
COG id: COG3470
COG function: function code P; Uncharacterized protein probably involved in high-affinity Fe2+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0423 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018470 [H]
Pfam domain/function: PF10634 Iron_transport [H]
EC number: NA
Molecular weight: Translated: 19473; Mature: 19473
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKWFSASLALLLGASIAHAAETPIGKHQIVKGMEIGAVYLQPVKMDPDGMMKKVEESDI CCCHHHHHHHHHHCCHHHHHHCCCCCHHHHHCCCEECEEEEEEEEECHHHHHHHHCCCCE HLEADIHAAKDNPNGFAEGDWMPYLVVKFELVKPGSSFRLDGELMPMVANDGPHYGDNVK EEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCEEECCEEEEEEECCCCCCCCCEE LAGPGKYKLKFTIQPPTANSHAHFGRHVDKETGVGPWFAPFELNYDFVYAGTGKKGGY EECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECEEEECCEEEEECCCCCCCC >Mature Secondary Structure MNKWFSASLALLLGASIAHAAETPIGKHQIVKGMEIGAVYLQPVKMDPDGMMKKVEESDI CCCHHHHHHHHHHCCHHHHHHCCCCCHHHHHCCCEECEEEEEEEEECHHHHHHHHCCCCE HLEADIHAAKDNPNGFAEGDWMPYLVVKFELVKPGSSFRLDGELMPMVANDGPHYGDNVK EEEEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCEEECCEEEEEEECCCCCCCCCEE LAGPGKYKLKFTIQPPTANSHAHFGRHVDKETGVGPWFAPFELNYDFVYAGTGKKGGY EECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECEEEECCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12271122 [H]