| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610518
Identifier: 121610518
GI number: 121610518
Start: 3964988
End: 3966046
Strand: Direct
Name: 121610518
Synonym: Veis_3589
Alternate gene names: NA
Gene position: 3964988-3966046 (Clockwise)
Preceding gene: 121610517
Following gene: 121610528
Centisome position: 71.23
GC content: 70.82
Gene sequence:
>1059_bases GTGACGCGACACGAGGAACTGGCGCGCAGCTTCGACCTGCTGGTGATCGACCATCCCTTCATCGGGCAGGCCGATCGGAC CGGCTGCTTTCGCGATCTCCGTGAACTGATCGCCGCCCCTGTGCTGTCGCGGCTGACGGCACAGGGCGCAGGCCCGTCCG GCCAAGCCTATGTCTGGCGCGGCAAGGTCTTCGCGCTGCCCACGGATGCCGCAGCCCAGGTCGCCAGCTACCGCGAAGAC CTGCTCGCCGATCTTGCGCCCGAGCCGCCCAGGCGCTGGGCCGATGTGCTGCTGCTGGCCGAGCGCGCACGCGCAAACGG GCAGACGCTGTCCTGGGCCGGCACACCGACCGACGCCGCCTGCACCTTTCTGACGCTGGCCGCCAACCTGGGGCACCCGC TGGGCCGCAACGAAGGCGAGTTCCTGCCGGCCCATGTGACCGAACAGGTCATGCGGCACCTGCACTGGATCGTGCAACAT GCGCAGCCGTCCTGCCTGGTCGACAACCCGATCCGCGTGTACGAGGCGATGCTGGCCGGCGAGCGCATGGTCTATTGCCC TGCGGCCTTTGGCTACTCCAACTACGCGCGCCAAGAGCGCAGGCCCTGGCTGCGGTTCGCGCCGCTGGCCGGGCCGGGTG CCGAGCCATCGTGTGGCGCCCTGCTCGGCGGCGCCGGCATGGCGATCTCCAGCCACAGCGTGGCACCGCGCGCGGCCGCC GCCTTTCTCGCCTGGTTGCACAGTGCCAAAGTGCAGCGCGGCCTCTACGCCAGCGCCGGGGGCCAGCCCGGCAACCTGGC TGCCTGGCGCGACCGGAGCGTCAACGCCATGGCCCGCGACTTCTTCGCCGCCACGCTGACGACACTCGAAGCCGCCTGGG TGCGCCCGCGATTCGCCGGCATCGTTGCCTTCGTGGAAGCCGCCGGCGGCGAAATCAACCGCTGTCTGCGCGGTCAGACC GACATGCGCCGGCTGCACCGAGCGCTGACCGCGCTGTACCACCAAGCCTGGGCGGAGCGCGGCCAGGCGCTGTCGCCGGC GCTGAAACACGCACCATGA
Upstream 100 bases:
>100_bases TCGCGGCGTTGCATCGCTTGCCAATACAGCTCGGTATGGGCTGCGCGATGCGCCTTGCGCTGCGCTCCGATGGCTGCGCG CAGCCTACGACATCTGATCG
Downstream 100 bases:
>100_bases ACCGCGCCTCGGCGCCCCTTCTGGAAATGGAAATCTGCAGCCATGCCGCGCTCGTCCGCTGGAACCGGACCGGGTAGTTC GACGCAACGGACAGCCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Sugar ABC Transporter
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MTRHEELARSFDLLVIDHPFIGQADRTGCFRDLRELIAAPVLSRLTAQGAGPSGQAYVWRGKVFALPTDAAAQVASYRED LLADLAPEPPRRWADVLLLAERARANGQTLSWAGTPTDAACTFLTLAANLGHPLGRNEGEFLPAHVTEQVMRHLHWIVQH AQPSCLVDNPIRVYEAMLAGERMVYCPAAFGYSNYARQERRPWLRFAPLAGPGAEPSCGALLGGAGMAISSHSVAPRAAA AFLAWLHSAKVQRGLYASAGGQPGNLAAWRDRSVNAMARDFFAATLTTLEAAWVRPRFAGIVAFVEAAGGEINRCLRGQT DMRRLHRALTALYHQAWAERGQALSPALKHAP
Sequences:
>Translated_352_residues MTRHEELARSFDLLVIDHPFIGQADRTGCFRDLRELIAAPVLSRLTAQGAGPSGQAYVWRGKVFALPTDAAAQVASYRED LLADLAPEPPRRWADVLLLAERARANGQTLSWAGTPTDAACTFLTLAANLGHPLGRNEGEFLPAHVTEQVMRHLHWIVQH AQPSCLVDNPIRVYEAMLAGERMVYCPAAFGYSNYARQERRPWLRFAPLAGPGAEPSCGALLGGAGMAISSHSVAPRAAA AFLAWLHSAKVQRGLYASAGGQPGNLAAWRDRSVNAMARDFFAATLTTLEAAWVRPRFAGIVAFVEAAGGEINRCLRGQT DMRRLHRALTALYHQAWAERGQALSPALKHAP >Mature_351_residues TRHEELARSFDLLVIDHPFIGQADRTGCFRDLRELIAAPVLSRLTAQGAGPSGQAYVWRGKVFALPTDAAAQVASYREDL LADLAPEPPRRWADVLLLAERARANGQTLSWAGTPTDAACTFLTLAANLGHPLGRNEGEFLPAHVTEQVMRHLHWIVQHA QPSCLVDNPIRVYEAMLAGERMVYCPAAFGYSNYARQERRPWLRFAPLAGPGAEPSCGALLGGAGMAISSHSVAPRAAAA FLAWLHSAKVQRGLYASAGGQPGNLAAWRDRSVNAMARDFFAATLTTLEAAWVRPRFAGIVAFVEAAGGEINRCLRGQTD MRRLHRALTALYHQAWAERGQALSPALKHAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38241; Mature: 38110
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRHEELARSFDLLVIDHPFIGQADRTGCFRDLRELIAAPVLSRLTAQGAGPSGQAYVWR CCCHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE GKVFALPTDAAAQVASYREDLLADLAPEPPRRWADVLLLAERARANGQTLSWAGTPTDAA CEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHH CTFLTLAANLGHPLGRNEGEFLPAHVTEQVMRHLHWIVQHAQPSCLVDNPIRVYEAMLAG HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC ERMVYCPAAFGYSNYARQERRPWLRFAPLAGPGAEPSCGALLGGAGMAISSHSVAPRAAA CEEEEECCHHCCHHHHHHHCCCCEEECCCCCCCCCCCCCHHHCCCCCEECCCCCCHHHHH AFLAWLHSAKVQRGLYASAGGQPGNLAAWRDRSVNAMARDFFAATLTTLEAAWVRPRFAG HHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHH IVAFVEAAGGEINRCLRGQTDMRRLHRALTALYHQAWAERGQALSPALKHAP HHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC >Mature Secondary Structure TRHEELARSFDLLVIDHPFIGQADRTGCFRDLRELIAAPVLSRLTAQGAGPSGQAYVWR CCHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE GKVFALPTDAAAQVASYREDLLADLAPEPPRRWADVLLLAERARANGQTLSWAGTPTDAA CEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHH CTFLTLAANLGHPLGRNEGEFLPAHVTEQVMRHLHWIVQHAQPSCLVDNPIRVYEAMLAG HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC ERMVYCPAAFGYSNYARQERRPWLRFAPLAGPGAEPSCGALLGGAGMAISSHSVAPRAAA CEEEEECCHHCCHHHHHHHCCCCEEECCCCCCCCCCCCCHHHCCCCCEECCCCCCHHHHH AFLAWLHSAKVQRGLYASAGGQPGNLAAWRDRSVNAMARDFFAATLTTLEAAWVRPRFAG HHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHH IVAFVEAAGGEINRCLRGQTDMRRLHRALTALYHQAWAERGQALSPALKHAP HHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA