Click here to switch to the map view.

The map label for this gene is ycjP [C]

Identifier: 121610504

GI number: 121610504

Start: 3952922

End: 3953806

Strand: Direct

Name: ycjP [C]

Synonym: Veis_3575

Alternate gene names: 121610504

Gene position: 3952922-3953806 (Clockwise)

Preceding gene: 121610503

Following gene: 121610505

Centisome position: 71.01

GC content: 61.69

Gene sequence:

>885_bases
ATGGCTGATCGCGCTTTGGCGCCCCGACGCGCTGGCGCGCCCGGCCCGGGCCGCATCGCCCTGTACCTGGCGCTGGTGCT
GCTGGCGCTGGTTTTTTTGCTGCCGGTCTACGTGATGCTGGTCAACTCCCTCAAGCCGCTGGACGAAATCCGTGACGGCG
ACCTGCTGGCATGGCCGGTCCACTGGACCATTGCGCCTTGGCTTTCGGCCTGGAGCCAGGCGCAGATCGGCGTGCAACCT
ACGGGACTGAAGCCCTATTTCGTCAACTCCTTCCTGCTGGTCCTGCCTGCCGTGCTGCTGTCGACGCTGATCGGCGCGAT
CAACGGCTACATCCTGACCCAGTTTCGCTGGCGCTGGGCGCATCTGCTGTTTGCGGCGATGCTGTTTTCGGTGTTCATCC
CGTTCCAGATCGTGCTGATCCCGATGGCCAAAACCCTGGGCATGCTGGGCCTTGCCGGGACGATCCGGGGCCTGATCTTT
GTCAACGTGGTCTACGGCATCGGCTTTACCACGCTGTTTTTCCGCAACTACTACGCCGCCTTTCCCCAGGAACTGGTGCG
CTCGGCGCGCATGGACGGCGCCGGCTTCTTCAGTGTTTTCGGCCGCATTTTGCTGCCCAACAGCGCGCCCATCATCGTGG
TGACGGTGATCTGGCAGTTCACCAACATCTGGAACGAGTTCCTCTTTGGCGCCTCGTTCAGCGATTTCAGTTCCTACCCG
CTGACCGTGGCGCTGAACAACCTGGTCAACAGCAGCACCGGGGTGAAGGAATACAACGTCCACTTCGCCGGCGCGTTCAT
TGCTGCGGCTCCTACGCTGCTGGTGTATTTGCTGTCCGGCAAATACTTCGTTCGCGGCCTGATGGCCGGGTCGGTAAAAG
GTTGA

Upstream 100 bases:

>100_bases
AACGAAATGGCGGTGGGTGCGGCCAGTTCGGTGCTGATGCTGCTGGCGCTTGCGGTGGTGGTGCTGCCGTACCTCTACAG
CGAAATGAAGAAGGTGAAAA

Downstream 100 bases:

>100_bases
AGGCAGTCCCATGGCAGCGCTCGATTTGATCCAAATCCACAAGAGTTTCGGCCCGGTCAAGATTCTTCATGACATCTCGA
TCGCTCTGCAGGACGGTGAA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MADRALAPRRAGAPGPGRIALYLALVLLALVFLLPVYVMLVNSLKPLDEIRDGDLLAWPVHWTIAPWLSAWSQAQIGVQP
TGLKPYFVNSFLLVLPAVLLSTLIGAINGYILTQFRWRWAHLLFAAMLFSVFIPFQIVLIPMAKTLGMLGLAGTIRGLIF
VNVVYGIGFTTLFFRNYYAAFPQELVRSARMDGAGFFSVFGRILLPNSAPIIVVTVIWQFTNIWNEFLFGASFSDFSSYP
LTVALNNLVNSSTGVKEYNVHFAGAFIAAAPTLLVYLLSGKYFVRGLMAGSVKG

Sequences:

>Translated_294_residues
MADRALAPRRAGAPGPGRIALYLALVLLALVFLLPVYVMLVNSLKPLDEIRDGDLLAWPVHWTIAPWLSAWSQAQIGVQP
TGLKPYFVNSFLLVLPAVLLSTLIGAINGYILTQFRWRWAHLLFAAMLFSVFIPFQIVLIPMAKTLGMLGLAGTIRGLIF
VNVVYGIGFTTLFFRNYYAAFPQELVRSARMDGAGFFSVFGRILLPNSAPIIVVTVIWQFTNIWNEFLFGASFSDFSSYP
LTVALNNLVNSSTGVKEYNVHFAGAFIAAAPTLLVYLLSGKYFVRGLMAGSVKG
>Mature_293_residues
ADRALAPRRAGAPGPGRIALYLALVLLALVFLLPVYVMLVNSLKPLDEIRDGDLLAWPVHWTIAPWLSAWSQAQIGVQPT
GLKPYFVNSFLLVLPAVLLSTLIGAINGYILTQFRWRWAHLLFAAMLFSVFIPFQIVLIPMAKTLGMLGLAGTIRGLIFV
NVVYGIGFTTLFFRNYYAAFPQELVRSARMDGAGFFSVFGRILLPNSAPIIVVTVIWQFTNIWNEFLFGASFSDFSSYPL
TVALNNLVNSSTGVKEYNVHFAGAFIAAAPTLLVYLLSGKYFVRGLMAGSVKG

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=280, Percent_Identity=26.0714285714286, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1789860, Length=209, Percent_Identity=23.444976076555, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32333; Mature: 32202

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADRALAPRRAGAPGPGRIALYLALVLLALVFLLPVYVMLVNSLKPLDEIRDGDLLAWPV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEH
HWTIAPWLSAWSQAQIGVQPTGLKPYFVNSFLLVLPAVLLSTLIGAINGYILTQFRWRWA
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
HLLFAAMLFSVFIPFQIVLIPMAKTLGMLGLAGTIRGLIFVNVVYGIGFTTLFFRNYYAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPQELVRSARMDGAGFFSVFGRILLPNSAPIIVVTVIWQFTNIWNEFLFGASFSDFSSYP
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCC
LTVALNNLVNSSTGVKEYNVHFAGAFIAAAPTLLVYLLSGKYFVRGLMAGSVKG
HHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
ADRALAPRRAGAPGPGRIALYLALVLLALVFLLPVYVMLVNSLKPLDEIRDGDLLAWPV
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEH
HWTIAPWLSAWSQAQIGVQPTGLKPYFVNSFLLVLPAVLLSTLIGAINGYILTQFRWRWA
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
HLLFAAMLFSVFIPFQIVLIPMAKTLGMLGLAGTIRGLIFVNVVYGIGFTTLFFRNYYAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPQELVRSARMDGAGFFSVFGRILLPNSAPIIVVTVIWQFTNIWNEFLFGASFSDFSSYP
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCC
LTVALNNLVNSSTGVKEYNVHFAGAFIAAAPTLLVYLLSGKYFVRGLMAGSVKG
HHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]