Click here to switch to the map view.

The map label for this gene is yurN [H]

Identifier: 121610386

GI number: 121610386

Start: 3827832

End: 3828731

Strand: Direct

Name: yurN [H]

Synonym: Veis_3454

Alternate gene names: 121610386

Gene position: 3827832-3828731 (Clockwise)

Preceding gene: 121610385

Following gene: 121610387

Centisome position: 68.76

GC content: 65.56

Gene sequence:

>900_bases
ATGAAGGCGGTGGCGGACCATGGGCATGGGCGTGTGCATGGCGCGCGCTGGTCGAATGCCCTCTTCATCGCGCCCTTCCT
GGCGGTCTACCTCGCGCTGCTGGTGGCGCCGCTGGTGCGCGGCATGTGGACCAGCCTGCAGGATCTGGACATGCTGTCGC
AGACCTCCGAGTTCGTCGGCCTGAAGAATTTCGCGGACCTTTGGGGCGACGAGATTTTCATGGGTTCAGTGCGCAACACC
TTCTGTTTCGTGCTGATGTCAACGCCGGTGTTCGTGGTGCTGGGCCTGGCGCTGGCGTTGGCGCTGAACCGGCCGGGCCG
CACCGGCGCGGTGTTGCGCGCCATCTTCTTTGGCTCGTCGGTGCTGTCGGTGACGATCGTCACGCTGGTGTGGAAACTGG
TGCTGATGCCGCACCACGGGCTGCTGGCGAACCTTGCGAACGCCGCCGGCCTGCCCGGGTTCTCGCCGCTGACGAGCGAA
GCCTGGGCCTTGCCGACGATTGCCGCCGTCACGGTGTGGTGGATCATCGGTTTGCCGATGATGCTGTTTCTGGCCGCGCT
GCAACAGGTGCCGGGCGAGGTCTATGAAGCCGCCGCGCTCGACAACTCGAGCCGCTGGCGCACGCTGGTGCACATCACCC
TGCCGGCCATTCGCCGCACGGTGGTGCTGGTGGCCGTGATCGAGGTCATTCTCCAGTTCCAGGTATTCGGGCAGGCGCAA
CTGCTGACCCAGGGCGGCCCGAACAATAGTTCGCGGCCCGTCGTGCAGTTCATCTACGAATCCGGCTTCACGCACTGGAC
ACTGGGCAATGCCGCCGCTGCCTCGCAGGTGCTGCTGGGCATCATGCTGGTCGCCATGGCGCTCCAGATGTGGGTGTCCG
GCCGCAAGGAGGCGTTCTGA

Upstream 100 bases:

>100_bases
GCGCAACGGTGGGGCTGCGCCTCGATGCCGCAGCCGTCCATCTGTTTGACGAAGCGGGGACCGCATACCATGCCCTGCCG
CGCCAACCACGGGGTGCGGC

Downstream 100 bases:

>100_bases
CATGAACATCGTCGGCAACAATCTGGCCGACCGCCTGGTGCTTGCGGCGGTCATTGCGCTGGCCATCGTGTGGGTGGCGC
CGCTCATGTGGGTGTTCGCG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MKAVADHGHGRVHGARWSNALFIAPFLAVYLALLVAPLVRGMWTSLQDLDMLSQTSEFVGLKNFADLWGDEIFMGSVRNT
FCFVLMSTPVFVVLGLALALALNRPGRTGAVLRAIFFGSSVLSVTIVTLVWKLVLMPHHGLLANLANAAGLPGFSPLTSE
AWALPTIAAVTVWWIIGLPMMLFLAALQQVPGEVYEAAALDNSSRWRTLVHITLPAIRRTVVLVAVIEVILQFQVFGQAQ
LLTQGGPNNSSRPVVQFIYESGFTHWTLGNAAAASQVLLGIMLVAMALQMWVSGRKEAF

Sequences:

>Translated_299_residues
MKAVADHGHGRVHGARWSNALFIAPFLAVYLALLVAPLVRGMWTSLQDLDMLSQTSEFVGLKNFADLWGDEIFMGSVRNT
FCFVLMSTPVFVVLGLALALALNRPGRTGAVLRAIFFGSSVLSVTIVTLVWKLVLMPHHGLLANLANAAGLPGFSPLTSE
AWALPTIAAVTVWWIIGLPMMLFLAALQQVPGEVYEAAALDNSSRWRTLVHITLPAIRRTVVLVAVIEVILQFQVFGQAQ
LLTQGGPNNSSRPVVQFIYESGFTHWTLGNAAAASQVLLGIMLVAMALQMWVSGRKEAF
>Mature_299_residues
MKAVADHGHGRVHGARWSNALFIAPFLAVYLALLVAPLVRGMWTSLQDLDMLSQTSEFVGLKNFADLWGDEIFMGSVRNT
FCFVLMSTPVFVVLGLALALALNRPGRTGAVLRAIFFGSSVLSVTIVTLVWKLVLMPHHGLLANLANAAGLPGFSPLTSE
AWALPTIAAVTVWWIIGLPMMLFLAALQQVPGEVYEAAALDNSSRWRTLVHITLPAIRRTVVLVAVIEVILQFQVFGQAQ
LLTQGGPNNSSRPVVQFIYESGFTHWTLGNAAAASQVLLGIMLVAMALQMWVSGRKEAF

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=280, Percent_Identity=26.4285714285714, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787570, Length=236, Percent_Identity=27.1186440677966, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32435; Mature: 32435

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAVADHGHGRVHGARWSNALFIAPFLAVYLALLVAPLVRGMWTSLQDLDMLSQTSEFVG
CCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKNFADLWGDEIFMGSVRNTFCFVLMSTPVFVVLGLALALALNRPGRTGAVLRAIFFGSS
HHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHH
VLSVTIVTLVWKLVLMPHHGLLANLANAAGLPGFSPLTSEAWALPTIAAVTVWWIIGLPM
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
MLFLAALQQVPGEVYEAAALDNSSRWRTLVHITLPAIRRTVVLVAVIEVILQFQVFGQAQ
HHHHHHHHHCCHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHH
LLTQGGPNNSSRPVVQFIYESGFTHWTLGNAAAASQVLLGIMLVAMALQMWVSGRKEAF
HEECCCCCCCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKAVADHGHGRVHGARWSNALFIAPFLAVYLALLVAPLVRGMWTSLQDLDMLSQTSEFVG
CCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKNFADLWGDEIFMGSVRNTFCFVLMSTPVFVVLGLALALALNRPGRTGAVLRAIFFGSS
HHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHH
VLSVTIVTLVWKLVLMPHHGLLANLANAAGLPGFSPLTSEAWALPTIAAVTVWWIIGLPM
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
MLFLAALQQVPGEVYEAAALDNSSRWRTLVHITLPAIRRTVVLVAVIEVILQFQVFGQAQ
HHHHHHHHHCCHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHH
LLTQGGPNNSSRPVVQFIYESGFTHWTLGNAAAASQVLLGIMLVAMALQMWVSGRKEAF
HEECCCCCCCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]