| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609826
Identifier: 121609826
GI number: 121609826
Start: 3223758
End: 3224654
Strand: Direct
Name: 121609826
Synonym: Veis_2879
Alternate gene names: NA
Gene position: 3223758-3224654 (Clockwise)
Preceding gene: 121609825
Following gene: 121609830
Centisome position: 57.91
GC content: 67.45
Gene sequence:
>897_bases ATGAACCAAACACCTTCAGCCTTCGTCTTGATCGCCATCGCGCTGGCCACCCTGGCCACCGGCATTGGCAGCGTGTGGCT GGCCGCATTGCTGATGCGGCTGGGCCTGGGCGGGCGCAACGGCAGCGTCGGGCCGCAGCATCTGCTGAGCCTGGCGGCAG GCGTCTTGCTGGCCACCGCTTTCATGCACCTGCTGCCCGAGGCTTTCGAGGGCCGGGCCGAGGCGCATGATCTGTTTGCC ACGCTGCTGGTGGGCCTGGTGTTTTTCTTTCTGCTCGACAAGGCCGAGCTTTGGCACCATGGGCACGAGCATGGCCACGC CGTGCGTGGTACGGACGGGCACGGCCATGCCGGGTCTGATGCGCATGCGCATGCGCATGGCCATGCCGGGCGTGACACGG GCGGGCCTGGCCCGAATGAGCACGCGCACCGGCACGATGGCCCGCGCACGGGCGGCTGGGCGGTGCTCACCGGGGACGGC GTGCATTGCTTTGGCGATGGCATCCTGATTGCATCGGCCTTCATGGCCGACATCCGCCTGGGCGTGCTGGCGGCGGTATC GGTGCTGGTGCACGAGGTGCCGCACCATATGGGCGACCTGGTGGTGCTGTGCCAGACCAACCCCAGCCAGCGCATCGCGC TGCTCAAAGTGTCGCTGGCCGGCGCCGTGACGGTGCTCGGCGGCGTGGCGGGCTATTTCCTGGTCGGGCAGTTGCAGGAC TTTCTGCCGTATTTCCTGGTGCTGGCGTCGAGCAGCTTTGTCTATGTGGCGCTGGCCGATCTGATTCCCCAACTGCAAAA GCGCCTGACGGCCCGGGCGACGCTGGTCCAGATCGTCTGGCTGCTCGTCGGCATGGCGCTGGTCACGCTGGTGCGCGCGC TGGCCGACAGGCATTGA
Upstream 100 bases:
>100_bases GCCCCGGAGCGTGGCCGCTGCGCGTTGCCGCAGGGGCGGCTTTGCTCCAACGCGCTGCGCCGGGGTCGGCGCGCCGGCAT GAAAATACACTCGGGCGCAT
Downstream 100 bases:
>100_bases ATGCCTGGCCGGTGGCGCTGGATGGCCGGCCGCGCCCTGCTTTTCTGAGCGCCGCCGGGGCCTGATCGGCCGGTGCACCG GCCCCTGCGATGGGGCCGCA
Product: zinc/iron permease
Products: NA
Alternate protein names: ZIP Zinc Transporter; Zinc Transporter ZIP; Transmembrane Protein; Divalent Heavy-Metal Cations Transporter; Metal Cation Transporter ZIP Family; Zinc Transporter; Zinc Transporter Foi; ZIP Zinc Transporter Family
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MNQTPSAFVLIAIALATLATGIGSVWLAALLMRLGLGGRNGSVGPQHLLSLAAGVLLATAFMHLLPEAFEGRAEAHDLFA TLLVGLVFFFLLDKAELWHHGHEHGHAVRGTDGHGHAGSDAHAHAHGHAGRDTGGPGPNEHAHRHDGPRTGGWAVLTGDG VHCFGDGILIASAFMADIRLGVLAAVSVLVHEVPHHMGDLVVLCQTNPSQRIALLKVSLAGAVTVLGGVAGYFLVGQLQD FLPYFLVLASSSFVYVALADLIPQLQKRLTARATLVQIVWLLVGMALVTLVRALADRH
Sequences:
>Translated_298_residues MNQTPSAFVLIAIALATLATGIGSVWLAALLMRLGLGGRNGSVGPQHLLSLAAGVLLATAFMHLLPEAFEGRAEAHDLFA TLLVGLVFFFLLDKAELWHHGHEHGHAVRGTDGHGHAGSDAHAHAHGHAGRDTGGPGPNEHAHRHDGPRTGGWAVLTGDG VHCFGDGILIASAFMADIRLGVLAAVSVLVHEVPHHMGDLVVLCQTNPSQRIALLKVSLAGAVTVLGGVAGYFLVGQLQD FLPYFLVLASSSFVYVALADLIPQLQKRLTARATLVQIVWLLVGMALVTLVRALADRH >Mature_298_residues MNQTPSAFVLIAIALATLATGIGSVWLAALLMRLGLGGRNGSVGPQHLLSLAAGVLLATAFMHLLPEAFEGRAEAHDLFA TLLVGLVFFFLLDKAELWHHGHEHGHAVRGTDGHGHAGSDAHAHAHGHAGRDTGGPGPNEHAHRHDGPRTGGWAVLTGDG VHCFGDGILIASAFMADIRLGVLAAVSVLVHEVPHHMGDLVVLCQTNPSQRIALLKVSLAGAVTVLGGVAGYFLVGQLQD FLPYFLVLASSSFVYVALADLIPQLQKRLTARATLVQIVWLLVGMALVTLVRALADRH
Specific function: Unknown
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI153252201, Length=116, Percent_Identity=33.6206896551724, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI40255101, Length=269, Percent_Identity=24.907063197026, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI153252214, Length=119, Percent_Identity=32.7731092436975, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI190358541, Length=289, Percent_Identity=23.1833910034602, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI205830424, Length=289, Percent_Identity=23.1833910034602, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI190360568, Length=289, Percent_Identity=23.1833910034602, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI187936949, Length=197, Percent_Identity=26.9035532994924, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI55741750, Length=197, Percent_Identity=26.9035532994924, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI190014617, Length=276, Percent_Identity=24.2753623188406, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI24586665, Length=292, Percent_Identity=26.3698630136986, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI205830403, Length=292, Percent_Identity=26.3698630136986, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI205830407, Length=292, Percent_Identity=26.3698630136986, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI117553619, Length=274, Percent_Identity=27.3722627737226, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI117553608, Length=274, Percent_Identity=27.3722627737226, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI205830405, Length=260, Percent_Identity=26.5384615384615, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI223633939, Length=120, Percent_Identity=29.1666666666667, Blast_Score=65, Evalue=9e-11, Organism=Caenorhabditis elegans, GI193209531, Length=292, Percent_Identity=22.2602739726027, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI71992548, Length=293, Percent_Identity=23.8907849829352, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17538884, Length=169, Percent_Identity=27.2189349112426, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71994730, Length=298, Percent_Identity=25.503355704698, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71998183, Length=121, Percent_Identity=33.0578512396694, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322166, Length=276, Percent_Identity=21.7391304347826, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI45549201, Length=140, Percent_Identity=31.4285714285714, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI161083817, Length=158, Percent_Identity=32.2784810126582, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI24664383, Length=158, Percent_Identity=32.2784810126582, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI24651189, Length=276, Percent_Identity=23.9130434782609, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24651193, Length=276, Percent_Identity=23.9130434782609, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24651187, Length=276, Percent_Identity=23.9130434782609, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24651191, Length=276, Percent_Identity=23.9130434782609, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24651195, Length=276, Percent_Identity=23.9130434782609, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24651197, Length=276, Percent_Identity=23.9130434782609, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI17864610, Length=144, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31326; Mature: 31326
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQTPSAFVLIAIALATLATGIGSVWLAALLMRLGLGGRNGSVGPQHLLSLAAGVLLATA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH FMHLLPEAFEGRAEAHDLFATLLVGLVFFFLLDKAELWHHGHEHGHAVRGTDGHGHAGSD HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEECCCCCCCCCCCC AHAHAHGHAGRDTGGPGPNEHAHRHDGPRTGGWAVLTGDGVHCFGDGILIASAFMADIRL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCCHHHHHHHHHHHHHH GVLAAVSVLVHEVPHHMGDLVVLCQTNPSQRIALLKVSLAGAVTVLGGVAGYFLVGQLQD HHHHHHHHHHHHHHHHHCCEEEEECCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHH FLPYFLVLASSSFVYVALADLIPQLQKRLTARATLVQIVWLLVGMALVTLVRALADRH HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNQTPSAFVLIAIALATLATGIGSVWLAALLMRLGLGGRNGSVGPQHLLSLAAGVLLATA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH FMHLLPEAFEGRAEAHDLFATLLVGLVFFFLLDKAELWHHGHEHGHAVRGTDGHGHAGSD HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCEECCCCCCCCCCCC AHAHAHGHAGRDTGGPGPNEHAHRHDGPRTGGWAVLTGDGVHCFGDGILIASAFMADIRL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCCHHHHHHHHHHHHHH GVLAAVSVLVHEVPHHMGDLVVLCQTNPSQRIALLKVSLAGAVTVLGGVAGYFLVGQLQD HHHHHHHHHHHHHHHHHCCEEEEECCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHH FLPYFLVLASSSFVYVALADLIPQLQKRLTARATLVQIVWLLVGMALVTLVRALADRH HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA