Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

Click here to switch to the map view.

The map label for this gene is 121609803

Identifier: 121609803

GI number: 121609803

Start: 3202804

End: 3203211

Strand: Direct

Name: 121609803

Synonym: Veis_2856

Alternate gene names: NA

Gene position: 3202804-3203211 (Clockwise)

Preceding gene: 121609802

Following gene: 121609807

Centisome position: 57.53

GC content: 70.1

Gene sequence:

>408_bases
GTGCTGGGTTCCTGGGTCGCGGCGACGTGCCTGGTGACGGCCCTGGACTTTGCCGCCGTCACGCGCTCCTGGTTGCCCCT
GGTGTTCTTCGCCGGCCTCCTGCTGGTGGTCAACATCGTCCAGGCCAGCGCCTCGACGCTGCTGGCTGTCCGTGCTGGCC
GGCAGTCCTGGGACGCCTTCACGTCCTTGCATGTGGTGGTCGCGGCCTCGGCCGTGGCCTTTCTCCTGGCCGGCGCGACG
GCGCTGGGCGAGCAGGCCATCGACGGCCGGATGTACGCGCGCTGCGGCGAGTGGTATCCGCAGGTCTACACGGTGGCGGC
CACCGTGGCCGCCTTCGAGAAGGCCCAGGCCGAGACTGCCGGCGACAAGCCGGGCATGCCGTTCATCATCGAGCGGGACG
ACGAGTAA

Upstream 100 bases:

>100_bases
GCCGTGGAGCGGCCCGAACTGCTGGAGCGCATCCGCAGCCATGCGGCCGCGTAAGGGGCCGCCATGAGCGATTCCAGCGT
GAAGGCGAAGCCGGTGGACG

Downstream 100 bases:

>100_bases
CCGCCGCGCCCCCTGGGCGGGAAAGGAACAGCCATGAAGGTCTACGGCCGCTATGGGACTGACCATAACGGCAGGGGCCT
TTTTCGTGGGCTGGTGACAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MLGSWVAATCLVTALDFAAVTRSWLPLVFFAGLLLVVNIVQASASTLLAVRAGRQSWDAFTSLHVVVAASAVAFLLAGAT
ALGEQAIDGRMYARCGEWYPQVYTVAATVAAFEKAQAETAGDKPGMPFIIERDDE

Sequences:

>Translated_135_residues
MLGSWVAATCLVTALDFAAVTRSWLPLVFFAGLLLVVNIVQASASTLLAVRAGRQSWDAFTSLHVVVAASAVAFLLAGAT
ALGEQAIDGRMYARCGEWYPQVYTVAATVAAFEKAQAETAGDKPGMPFIIERDDE
>Mature_135_residues
MLGSWVAATCLVTALDFAAVTRSWLPLVFFAGLLLVVNIVQASASTLLAVRAGRQSWDAFTSLHVVVAASAVAFLLAGAT
ALGEQAIDGRMYARCGEWYPQVYTVAATVAAFEKAQAETAGDKPGMPFIIERDDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14298; Mature: 14298

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGSWVAATCLVTALDFAAVTRSWLPLVFFAGLLLVVNIVQASASTLLAVRAGRQSWDAF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
TSLHVVVAASAVAFLLAGATALGEQAIDGRMYARCGEWYPQVYTVAATVAAFEKAQAETA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GDKPGMPFIIERDDE
CCCCCCCEEEECCCC
>Mature Secondary Structure
MLGSWVAATCLVTALDFAAVTRSWLPLVFFAGLLLVVNIVQASASTLLAVRAGRQSWDAF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
TSLHVVVAASAVAFLLAGATALGEQAIDGRMYARCGEWYPQVYTVAATVAAFEKAQAETA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GDKPGMPFIIERDDE
CCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA