| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609803
Identifier: 121609803
GI number: 121609803
Start: 3202804
End: 3203211
Strand: Direct
Name: 121609803
Synonym: Veis_2856
Alternate gene names: NA
Gene position: 3202804-3203211 (Clockwise)
Preceding gene: 121609802
Following gene: 121609807
Centisome position: 57.53
GC content: 70.1
Gene sequence:
>408_bases GTGCTGGGTTCCTGGGTCGCGGCGACGTGCCTGGTGACGGCCCTGGACTTTGCCGCCGTCACGCGCTCCTGGTTGCCCCT GGTGTTCTTCGCCGGCCTCCTGCTGGTGGTCAACATCGTCCAGGCCAGCGCCTCGACGCTGCTGGCTGTCCGTGCTGGCC GGCAGTCCTGGGACGCCTTCACGTCCTTGCATGTGGTGGTCGCGGCCTCGGCCGTGGCCTTTCTCCTGGCCGGCGCGACG GCGCTGGGCGAGCAGGCCATCGACGGCCGGATGTACGCGCGCTGCGGCGAGTGGTATCCGCAGGTCTACACGGTGGCGGC CACCGTGGCCGCCTTCGAGAAGGCCCAGGCCGAGACTGCCGGCGACAAGCCGGGCATGCCGTTCATCATCGAGCGGGACG ACGAGTAA
Upstream 100 bases:
>100_bases GCCGTGGAGCGGCCCGAACTGCTGGAGCGCATCCGCAGCCATGCGGCCGCGTAAGGGGCCGCCATGAGCGATTCCAGCGT GAAGGCGAAGCCGGTGGACG
Downstream 100 bases:
>100_bases CCGCCGCGCCCCCTGGGCGGGAAAGGAACAGCCATGAAGGTCTACGGCCGCTATGGGACTGACCATAACGGCAGGGGCCT TTTTCGTGGGCTGGTGACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MLGSWVAATCLVTALDFAAVTRSWLPLVFFAGLLLVVNIVQASASTLLAVRAGRQSWDAFTSLHVVVAASAVAFLLAGAT ALGEQAIDGRMYARCGEWYPQVYTVAATVAAFEKAQAETAGDKPGMPFIIERDDE
Sequences:
>Translated_135_residues MLGSWVAATCLVTALDFAAVTRSWLPLVFFAGLLLVVNIVQASASTLLAVRAGRQSWDAFTSLHVVVAASAVAFLLAGAT ALGEQAIDGRMYARCGEWYPQVYTVAATVAAFEKAQAETAGDKPGMPFIIERDDE >Mature_135_residues MLGSWVAATCLVTALDFAAVTRSWLPLVFFAGLLLVVNIVQASASTLLAVRAGRQSWDAFTSLHVVVAASAVAFLLAGAT ALGEQAIDGRMYARCGEWYPQVYTVAATVAAFEKAQAETAGDKPGMPFIIERDDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14298; Mature: 14298
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGSWVAATCLVTALDFAAVTRSWLPLVFFAGLLLVVNIVQASASTLLAVRAGRQSWDAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH TSLHVVVAASAVAFLLAGATALGEQAIDGRMYARCGEWYPQVYTVAATVAAFEKAQAETA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GDKPGMPFIIERDDE CCCCCCCEEEECCCC >Mature Secondary Structure MLGSWVAATCLVTALDFAAVTRSWLPLVFFAGLLLVVNIVQASASTLLAVRAGRQSWDAF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH TSLHVVVAASAVAFLLAGATALGEQAIDGRMYARCGEWYPQVYTVAATVAAFEKAQAETA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GDKPGMPFIIERDDE CCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA