| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609655
Identifier: 121609655
GI number: 121609655
Start: 3047242
End: 3048522
Strand: Direct
Name: 121609655
Synonym: Veis_2702
Alternate gene names: NA
Gene position: 3047242-3048522 (Clockwise)
Preceding gene: 121609648
Following gene: 121609680
Centisome position: 54.74
GC content: 69.16
Gene sequence:
>1281_bases ATGACCGCCCGACCGATCGTCCCGCCCGCCCTGCCTGCCCTGCAATGGGATTTGTTTTGCCGCGTGATCGACAACCTGGG CGACATCGGCGTCTGCTGGCGTCTGGCGGCGCAGTTGGCGGCGCGCGGCCAGCGCGTGCGCCTGTGGGTTTCTGATGCCT CGGCGCTGCGCTGGATGGCGCCCGGCGGCTGCCCGGGCGTCGAAGTCCGCGCCTGGCAAGCCCCGCCCCCGACCCCCGAC GAGCCAGCGCCGCAGGTGCTGCTGGAAGCCTTCGGTTGCGAAATACCCCCTGAATTCATCGCGTACAGCGCCAACCGATA CCGCGCCAGCGGCCAAAGGCCCGTATGGATCAATTTGGAATACCTGTCGGCGCAGCGCTATGTCGAGCGCAACCACCGGC TGCCCTCGCCGATTTCGTCGGGTCCGGCCCGGGGCTGGACACGCTGGTTCTTCTACCCCGGCTTTACGCCGGCCACCGGG GGTCTGCTGCGCGAGCCGGAACTGATGCAGCGGCGCCAGGCGTTTGACCGCATGGCGTGGCGCAAAGCCTTTGCTGCAGG CGACGTGGGCGATGTGGGCGACGTGGGCGATGTGGGCGGCACCGGTGCCGGGCGGCGCTGGATGTCCTTGTTCTGCTACG AGCCTCCGGCGCTGGCAGAGCTACTGGCGCAGTTGCGGCAGCGGCCAACGCAGTTGCTGGTGACGCCAGGCCGCGCCAGC GCAGCGCTACAGGCCGCCCTGGCGCAGACACAGGCCGATCGGGACGGCCCGCAGCGCCCGGGCCACCGGCTCGGCCGGCT TGCCATTGCCAACCTGCAAGCCTGCCCCCAACCGGCCTTCGACGAGATGCTCTGGGCCTGCGACTTGAACGCCGTGCGCG GCGAAGACTCACTGGTGCGGGCGCTGTGGGCCGGGCAGGCCCTGGTCTGGCAGATTTACCCGCAGCATGACGACGCCCAC CATGCCAAGCTGCAGGCATTTCTCGACTGGCTGCAGGCGCCGCTTTCGCTGCGGCAGTTCCATGCCCGCTGGAACGGACT GTCCAGCGCGCCGCTGCAATGGCCCGACGATGACCGCCTGGCCGAATGGAGCGCCTGCATCCAGGCCGCCCGCGCACGGC TGCTGGCGCAGGACGATTTGCTCACACAGTTGCTGGGCTTCGTCGCGTCGCATCTTGCCGAAGAAGGCGGCCACGCCCGC CCGACGATCAACGGGTCATGCCCAGCGCCTGCAGACGACCCGGTTCGAGAATCTCGATCCAGTAGCCATCGGGGTCCTTG A
Upstream 100 bases:
>100_bases TTGCGCTGCGCTCCGATGGCTGCGCGCAGCCTACGACATCTGATCGGTGACGCGACACTAGCCGCACCGTGGGGCAGGTG CAGGGTACGATCCGACCCCG
Downstream 100 bases:
>100_bases TGAAAGCGACGTTCTTGATTTTTCCCTGCTCCGGCCGTTTGACATATGCCACGCCGTTGCTGTCGAACCAGGCAATGGCG CTGTCGAGGTCGGGAACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MTARPIVPPALPALQWDLFCRVIDNLGDIGVCWRLAAQLAARGQRVRLWVSDASALRWMAPGGCPGVEVRAWQAPPPTPD EPAPQVLLEAFGCEIPPEFIAYSANRYRASGQRPVWINLEYLSAQRYVERNHRLPSPISSGPARGWTRWFFYPGFTPATG GLLREPELMQRRQAFDRMAWRKAFAAGDVGDVGDVGDVGGTGAGRRWMSLFCYEPPALAELLAQLRQRPTQLLVTPGRAS AALQAALAQTQADRDGPQRPGHRLGRLAIANLQACPQPAFDEMLWACDLNAVRGEDSLVRALWAGQALVWQIYPQHDDAH HAKLQAFLDWLQAPLSLRQFHARWNGLSSAPLQWPDDDRLAEWSACIQAARARLLAQDDLLTQLLGFVASHLAEEGGHAR PTINGSCPAPADDPVRESRSSSHRGP
Sequences:
>Translated_426_residues MTARPIVPPALPALQWDLFCRVIDNLGDIGVCWRLAAQLAARGQRVRLWVSDASALRWMAPGGCPGVEVRAWQAPPPTPD EPAPQVLLEAFGCEIPPEFIAYSANRYRASGQRPVWINLEYLSAQRYVERNHRLPSPISSGPARGWTRWFFYPGFTPATG GLLREPELMQRRQAFDRMAWRKAFAAGDVGDVGDVGDVGGTGAGRRWMSLFCYEPPALAELLAQLRQRPTQLLVTPGRAS AALQAALAQTQADRDGPQRPGHRLGRLAIANLQACPQPAFDEMLWACDLNAVRGEDSLVRALWAGQALVWQIYPQHDDAH HAKLQAFLDWLQAPLSLRQFHARWNGLSSAPLQWPDDDRLAEWSACIQAARARLLAQDDLLTQLLGFVASHLAEEGGHAR PTINGSCPAPADDPVRESRSSSHRGP >Mature_425_residues TARPIVPPALPALQWDLFCRVIDNLGDIGVCWRLAAQLAARGQRVRLWVSDASALRWMAPGGCPGVEVRAWQAPPPTPDE PAPQVLLEAFGCEIPPEFIAYSANRYRASGQRPVWINLEYLSAQRYVERNHRLPSPISSGPARGWTRWFFYPGFTPATGG LLREPELMQRRQAFDRMAWRKAFAAGDVGDVGDVGDVGGTGAGRRWMSLFCYEPPALAELLAQLRQRPTQLLVTPGRASA ALQAALAQTQADRDGPQRPGHRLGRLAIANLQACPQPAFDEMLWACDLNAVRGEDSLVRALWAGQALVWQIYPQHDDAHH AKLQAFLDWLQAPLSLRQFHARWNGLSSAPLQWPDDDRLAEWSACIQAARARLLAQDDLLTQLLGFVASHLAEEGGHARP TINGSCPAPADDPVRESRSSSHRGP
Specific function: Unknown
COG id: COG4394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47002; Mature: 46871
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARPIVPPALPALQWDLFCRVIDNLGDIGVCWRLAAQLAARGQRVRLWVSDASALRWMA CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCHHEEEC PGGCPGVEVRAWQAPPPTPDEPAPQVLLEAFGCEIPPEFIAYSANRYRASGQRPVWINLE CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCHHHHCCCCCCEEEEEH YLSAQRYVERNHRLPSPISSGPARGWTRWFFYPGFTPATGGLLREPELMQRRQAFDRMAW HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH RKAFAAGDVGDVGDVGDVGGTGAGRRWMSLFCYEPPALAELLAQLRQRPTQLLVTPGRAS HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHEECCCHHHHHHHHHHHCCCCEEEEECCCHH AALQAALAQTQADRDGPQRPGHRLGRLAIANLQACPQPAFDEMLWACDLNAVRGEDSLVR HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHCCHHHHHH ALWAGQALVWQIYPQHDDAHHAKLQAFLDWLQAPLSLRQFHARWNGLSSAPLQWPDDDRL HHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH AEWSACIQAARARLLAQDDLLTQLLGFVASHLAEEGGHARPTINGSCPAPADDPVRESRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHC SSHRGP CCCCCC >Mature Secondary Structure TARPIVPPALPALQWDLFCRVIDNLGDIGVCWRLAAQLAARGQRVRLWVSDASALRWMA CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEECCCHHEEEC PGGCPGVEVRAWQAPPPTPDEPAPQVLLEAFGCEIPPEFIAYSANRYRASGQRPVWINLE CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCHHHHCCCCCCEEEEEH YLSAQRYVERNHRLPSPISSGPARGWTRWFFYPGFTPATGGLLREPELMQRRQAFDRMAW HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH RKAFAAGDVGDVGDVGDVGGTGAGRRWMSLFCYEPPALAELLAQLRQRPTQLLVTPGRAS HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHEECCCHHHHHHHHHHHCCCCEEEEECCCHH AALQAALAQTQADRDGPQRPGHRLGRLAIANLQACPQPAFDEMLWACDLNAVRGEDSLVR HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHCCHHHHHH ALWAGQALVWQIYPQHDDAHHAKLQAFLDWLQAPLSLRQFHARWNGLSSAPLQWPDDDRL HHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH AEWSACIQAARARLLAQDDLLTQLLGFVASHLAEEGGHARPTINGSCPAPADDPVRESRS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHC SSHRGP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA